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Prazeres, Martina; Uthicke, Sven; Pandolfi, John M (2015): Ocean acidification induces biochemical and morphological changes in the calcification process of large benthic foraminifera [dataset]. PANGAEA, https://doi.org/10.1594/PANGAEA.848419

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Keyword(s):
Amphistegina lessonii; Benthos; Bottles or small containers/Aquaria (<20 L); Calcification/Dissolution; Chromista; Coast and continental shelf; Foraminifera; Heterotrophic prokaryotes; Laboratory experiment; Marginopora vertebralis; Single species; South Pacific; Temperate; Tropical
Related to:
Prazeres, Martina; Uthicke, Sven; Pandolfi, John M (2015): Ocean acidification induces biochemical and morphological changes in the calcification process of large benthic foraminifera. Proceedings of the Royal Society B-Biological Sciences, 282(1803), 20142782-20142782, https://doi.org/10.1098/rspb.2014.2782
Original version:
Prazeres, Martina; Uthicke, Sven; Pandolfi, John M (2015): Data from: Ocean acidification induces biochemical and morphological changes in the calcification process of large benthic foraminifera. Dryad Digital Repository, https://doi.org/10.5061/dryad.28816
Further details:
Gattuso, Jean-Pierre; Epitalon, Jean-Marie; Lavigne, Héloïse (2015): seacarb: seawater carbonate chemistry with R. R package version 3.0.6. https://cran.r-project.org/package=seacarb
Project(s):
Ocean Acidification International Coordination Centre (OA-ICC)
Coverage:
Median Latitude: -20.104055 * Median Longitude: 148.942155 * South-bound Latitude: -23.447690 * West-bound Longitude: 145.971810 * North-bound Latitude: -16.760420 * East-bound Longitude: 151.912500
Date/Time Start: 2013-04-01T00:00:00 * Date/Time End: 2013-04-30T00:00:00
Event(s):
Green_Island_OA * Latitude: -16.760420 * Longitude: 145.971810 * Date/Time Start: 2013-04-01T00:00:00 * Date/Time End: 2013-04-30T00:00:00 * Method/Device: Experiment (EXP)
Heron_Reef_OA * Latitude: -23.447690 * Longitude: 151.912500 * Date/Time Start: 2013-04-01T00:00:00 * Date/Time End: 2013-04-30T00:00:00 * Method/Device: Experiment (EXP)
Comment:
In order to allow full comparability with other ocean acidification data sets, the R package seacarb (Gattuso et al, 2015) was used to compute a complete and consistent set of carbonate system variables, as described by Nisumaa et al. (2010). In this dataset the original values were archived in addition with the recalculated parameters (see related PI). The date of carbonate chemistry calculation is 2015-07-16.
Parameter(s):
#NameShort NameUnitPrincipal InvestigatorMethod/DeviceComment
1Event labelEventPrazeres, Martina
2SpeciesSpeciesPrazeres, Martina
3TreatmentTreatPrazeres, Martina
4Growth rateµ%/dayPrazeres, Martinaexpressed as buoyant weight
5Growth rateµ%/dayPrazeres, Martinaexpressed as surface area
6DensityDensityg/cm3Prazeres, Martinafinal shell
7Time in daysTimedaysPrazeres, Martina
8Calcium adenosine triphosphatase activityCa-ATPase actµmol/mg/hPrazeres, Martina
9Magnesium adenosine triphosphatase activityMg-ATPase actµmol/mg/hPrazeres, Martina
10SalinitySalPrazeres, Martina
11Temperature, waterTemp°CPrazeres, Martina
12Temperature, water, standard errorT std e±Prazeres, Martina
13Alkalinity, totalATµmol/kgPrazeres, MartinaPotentiometric titration
14Alkalinity, total, standard errorAT std e±Prazeres, MartinaPotentiometric titration
15Carbon, inorganic, dissolvedDICµmol/kgPrazeres, MartinaCoulometric titration
16Carbon, inorganic, dissolved, standard errorDIC std e±Prazeres, MartinaCoulometric titration
17pHpHPrazeres, MartinaPotentiometricNBS scale
18pH, standard errorpH std e±Prazeres, MartinaPotentiometricNBS scale
19Carbon, inorganic, dissolvedDICµmol/kgPrazeres, MartinaCalculated using CO2SYS
20Carbon, inorganic, dissolved, standard errorDIC std e±Prazeres, MartinaCalculated using CO2SYS
21Partial pressure of carbon dioxide (water) at sea surface temperature (wet air)pCO2water_SST_wetµatmPrazeres, MartinaCalculated using CO2SYS
22Partial pressure of carbon dioxide (water) at sea surface temperature (wet air), standard errorpCO2water_SST_wet std e±Prazeres, MartinaCalculated using CO2SYS
23Carbonate ion[CO3]2-µmol/kgPrazeres, MartinaCalculated using CO2SYS
24Carbonate ion, standard error[CO3]2- std e±Prazeres, MartinaCalculated using CO2SYS
25Calcite saturation stateOmega CalPrazeres, MartinaCalculated using CO2SYS
26Calcite saturation state, standard errorOmega Cal std e±Prazeres, MartinaCalculated using CO2SYS
27Carbonate system computation flagCSC flagYang, YanCalculated using seacarb after Nisumaa et al. (2010)
28pHpHYang, YanCalculated using seacarb after Nisumaa et al. (2010)total scale
29Carbon dioxideCO2µmol/kgYang, YanCalculated using seacarb after Nisumaa et al. (2010)
30Fugacity of carbon dioxide (water) at sea surface temperature (wet air)fCO2water_SST_wetµatmYang, YanCalculated using seacarb after Nisumaa et al. (2010)
31Partial pressure of carbon dioxide (water) at sea surface temperature (wet air)pCO2water_SST_wetµatmYang, YanCalculated using seacarb after Nisumaa et al. (2010)
32Bicarbonate ion[HCO3]-µmol/kgYang, YanCalculated using seacarb after Nisumaa et al. (2010)
33Carbonate ion[CO3]2-µmol/kgYang, YanCalculated using seacarb after Nisumaa et al. (2010)
34Alkalinity, totalATµmol/kgYang, YanCalculated using seacarb after Nisumaa et al. (2010)
35Aragonite saturation stateOmega ArgYang, YanCalculated using seacarb after Nisumaa et al. (2010)
36Calcite saturation stateOmega CalYang, YanCalculated using seacarb after Nisumaa et al. (2010)
License:
Creative Commons Attribution 3.0 Unported (CC-BY-3.0)
Status:
Curation Level: Enhanced curation (CurationLevelC)
Size:
9328 data points

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