Citation:

PANGAEA.848035

Name: Ocean acidification has multiple modes of action on bivalve larvae
Published: 2015-07-13
License: https://creativecommons.org/licenses/by/3.0/
Keywords: Animalia; Behaviour; Bottles or small containers/Aquaria (<20 L); Coast and continental shelf; Development; Growth/Morphology; Laboratory experiment; Mediterranean Sea; Mollusca; Mytilus californianus; Pelagos; Respiration; Single species; Temperate; Zooplankton

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Keyword(s):

Animalia; Behaviour; Bottles or small containers/Aquaria (<20 L); Coast and continental shelf; Development; Growth/Morphology; Laboratory experiment; Mediterranean Sea; Mollusca; Mytilus californianus; Pelagos; Respiration; Single species; Temperate; Zooplankton

Related to:

Waldbusser, George G; Hales, Burke; Langdon, Chris; Haley, Brian A; Schrader, Paul; Brunner, Elizabeth L; Gray, Matthew W; Miller, Cale A; Gimenez, Iria; Hutchinson, Greg (2015): Ocean Acidification Has Multiple Modes of Action on Bivalve Larvae. PLoS ONE, 10(6), e0128376, https://doi.org/10.1371/journal.pone.0128376

Original version:

Waldbusser, George G (2015): Dataset: California mussel larvae experiments. Biological and Chemical Oceanography Data Management Office, https://www.bco-dmo.org/dataset/557253

Further details:

Gattuso, Jean-Pierre; Epitalon, Jean-Marie; Lavigne, Héloïse (2015): seacarb: seawater carbonate chemistry with R. R package version 3.0.6. https://cran.r-project.org/package=seacarb

Project(s):

Ocean Acidification International Coordination Centre (OA-ICC)

Comment:

In order to allow full comparability with other ocean acidification data sets, the R package seacarb (Gattuso et al, 2015) was used to compute a complete and consistent set of carbonate system variables, as described by Nisumaa et al. (2010). In this dataset the original values were archived in addition with the recalculated parameters (see related PI). The date of carbonate chemistry calculation is 2015-07-09.

Parameter(s):

#	Name	Short Name	Unit	Principal Investigator	Method/Device	Comment
1	Species	Species		Waldbusser, George G
2	Aragonite saturation state	Omega Arg		Waldbusser, George G		treatment
3	Treatment	Treat		Waldbusser, George G
4	Alkalinity, total	AT	µmol/kg	Waldbusser, George G	Calculated
5	Carbon, inorganic, dissolved	DIC	µmol/kg	Waldbusser, George G
6	Partial pressure of carbon dioxide (water) at sea surface temperature (wet air)	pCO2water_SST_wet	µatm	Waldbusser, George G
7	Bicarbonate ion	[HCO3]-	µmol/kg	Waldbusser, George G	Calculated
8	Carbonate ion	[CO3]2-	µmol/kg	Waldbusser, George G	Calculated
9	pH	pH		Waldbusser, George G	Calculated	total scale
10	Aragonite saturation state	Omega Arg		Waldbusser, George G	Calculated
11	Proportion	Prop		Waldbusser, George G		normally developed larvae 48 hours post fertilization
12	Proportion, standard deviation	Prop std dev	±	Waldbusser, George G		normally developed larvae 48 hours post fertilization
13	Shell length	Shell l	mm	Waldbusser, George G
14	Shell length, standard deviation	Shell l std dev	±	Waldbusser, George G
15	Respiration rate, oxygen, per individual	Resp O2/ind	pmol/#/h	Waldbusser, George G
16	Respiration rate, oxygen, standard deviation	Resp O2 std dev	±	Waldbusser, George G
17	Proportion	Prop		Waldbusser, George G		larvae feeding determined as the ratio of larvae that had at least 1 bead in their gut to the total # of larvae counted
18	Proportion, standard deviation	Prop std dev	±	Waldbusser, George G		larvae feeding determined as the ratio of larvae that had at least 1 bead in their gut to the total # of larvae counted
19	Salinity	Sal		Waldbusser, George G
20	Temperature, water	Temp	°C	Waldbusser, George G
21	Carbonate system computation flag	CSC flag		Yang, Yan	Calculated using seacarb after Nisumaa et al. (2010)
22	pH	pH		Yang, Yan	Calculated using seacarb after Nisumaa et al. (2010)	total scale
23	Carbon dioxide	CO2	µmol/kg	Yang, Yan	Calculated using seacarb after Nisumaa et al. (2010)
24	Fugacity of carbon dioxide (water) at sea surface temperature (wet air)	fCO2water_SST_wet	µatm	Yang, Yan	Calculated using seacarb after Nisumaa et al. (2010)
25	Partial pressure of carbon dioxide (water) at sea surface temperature (wet air)	pCO2water_SST_wet	µatm	Yang, Yan	Calculated using seacarb after Nisumaa et al. (2010)
26	Bicarbonate ion	[HCO3]-	µmol/kg	Yang, Yan	Calculated using seacarb after Nisumaa et al. (2010)
27	Carbonate ion	[CO3]2-	µmol/kg	Yang, Yan	Calculated using seacarb after Nisumaa et al. (2010)
28	Aragonite saturation state	Omega Arg		Yang, Yan	Calculated using seacarb after Nisumaa et al. (2010)
29	Calcite saturation state	Omega Cal		Yang, Yan	Calculated using seacarb after Nisumaa et al. (2010)

License:

Creative Commons Attribution 3.0 Unported (CC-BY-3.0)

Status:

Curation Level: Enhanced curation (CurationLevelC)

Size:

470 data points

Data

Download dataset as tab-delimited text — use the following character encoding:

1 Species	2 Omega Arg (treatment)	3 Treat	4 AT [µmol/kg] (Calculated)	5 DIC [µmol/kg]	6 pCO2water_SST_wet [µatm]	7 [HCO3]- [µmol/kg] (Calculated)	8 [CO3]2- [µmol/kg] (Calculated)	9 pH (total scale, Calculated)	10 Omega Arg (Calculated)	11 Prop (normally developed larvae 48 ...)	12 Prop std dev [±] (normally developed larvae 48 ...)	13 Shell l [mm]	14 Shell l std dev [±]	15 Resp O2/ind [pmol/#/h]	16 Resp O2 std dev [±]	17 Prop (larvae feeding determined as ...)	18 Prop std dev [±] (larvae feeding determined as ...)	19 Sal	20 Temp [°C]	21 CSC flag (Calculated using seacarb afte...)	22 pH (total scale, Calculated using...)	23 CO2 [µmol/kg] (Calculated using seacarb afte...)	24 fCO2water_SST_wet [µatm] (Calculated using seacarb afte...)	25 pCO2water_SST_wet [µatm] (Calculated using seacarb afte...)	26 [HCO3]- [µmol/kg] (Calculated using seacarb afte...)	27 [CO3]2- [µmol/kg] (Calculated using seacarb afte...)	28 Omega Arg (Calculated using seacarb afte...)	29 Omega Cal (Calculated using seacarb afte...)
Mytilus californianus (mollusk)	0.5	High pCO2	2373	2394	2229	2274	41	7.39	0.65	0.14	0.03	0.09029	0.00075	31.14	4.49	0.24	0.08	31	18	15	7.38	79.74	2275.24	2283.20	2272.89	41.36	0.65	1.02
Mytilus californianus (mollusk)	0.5	Low pCO2	750	679	219	639	32	7.84	0.50	0.01	0.01	0.08827	0.00192	11.94	2.52	0.61	0.08	31	18	15	7.83	7.88	224.76	225.55	638.12	33.00	0.52	0.81
Mytilus californianus (mollusk)	0.5	Mid High pCO2	1367	1342	874	1279	32	7.54	0.51	0.00	0.01	0.08509	0.00155			0.36	0.03	31	18	15	7.53	31.83	908.07	911.24	1277.44	32.74	0.52	0.80
Mytilus californianus (mollusk)	0.5	Mid Low pCO2	966	951	716	905	20	7.48	0.31	0.01	0.01	0.08823	0.00134			0.53	0.15	31	18	15	7.47	26.06	743.53	746.13	904.88	20.06	0.32	0.49
Mytilus californianus (mollusk)	1.0	High pCO2	3378	3348	2175	3189	82	7.55	1.31	0.50	0.11	0.10413	0.00028			0.32	0.02	31	18	15	7.54	77.84	2221.03	2228.80	3186.86	83.30	1.31	2.04
Mytilus californianus (mollusk)	1.0	Low pCO2	1095	966	197	889	69	8.03	1.09	0.53	0.11	0.10479	0.00036			0.69	0.07	31	18	15	8.02	7.19	205.16	205.88	888.68	70.13	1.10	1.72
Mytilus californianus (mollusk)	1.0	Mid High pCO2	1968	1905	773	1812	65	7.77	1.14	0.53	0.03	0.10585	0.00049			0.54	0.03	31	18	15	7.67	32.87	937.81	941.09	1808.59	63.54	1.00	1.56
Mytilus californianus (mollusk)	1.0	Mid Low pCO2	1447	1350	437	1270	65	7.84	1.03	0.48	0.01	0.10504	0.00022	16.96	2.39	0.59	0.09	31	18	15	7.84	15.51	442.40	443.94	1268.26	66.23	1.04	1.63
Mytilus californianus (mollusk)	2.0	High pCO2	4755	4677	2458	4451	137	7.64	2.18	0.53	0.06	0.10936	0.00045			0.33	0.12	31	18	15	7.62	90.55	2583.50	2592.54	4447.01	139.45	2.19	3.42
Mytilus californianus (mollusk)	2.0	Low pCO2	1614	1426	241	1298	119	8.11	1.87	0.66	0.03	0.10854	0.00038			0.63	0.16	31	18	15	8.09	8.87	252.98	253.86	1296.15	120.98	1.90	2.97
Mytilus californianus (mollusk)	2.0	Mid High pCO2	2892	2724	803	2550	146	7.88	2.33	0.63	0.02	0.10950	0.00137	15.04	2.63	0.56	0.06	31	18	15	7.88	28.39	810.12	812.95	2549.45	146.16	2.30	3.59
Mytilus californianus (mollusk)	2.0	Mid Low pCO2	2199	1996	396	1834	148	8.04	2.36	0.59	0.01	0.10911	0.00029			0.56	0.11	31	18	15	8.03	14.34	409.25	410.68	1832.22	149.43	2.35	3.67
Mytilus californianus (mollusk)	4.0	High pCO2	6985	6686	2063	6286	326	7.86	5.21	0.52	0.02	0.11256	0.00045	14.91	1.46	0.42	0.04	31	18	15	7.84	76.52	2183.29	2190.92	6280.37	329.11	5.18	8.08
Mytilus californianus (mollusk)	4.0	Low pCO2	2498	2095	191	1798	290	8.35	4.58	0.67	0.05	0.11134	0.00019	17.29	2.81	0.55	0.28	31	18	15	8.33	7.01	200.00	200.70	1794.63	293.36	4.62	7.20
Mytilus californianus (mollusk)	4.0	Mid High pCO2	4280	3943	768	3621	295	8.05	4.69	0.69	0.03	0.11103	0.00119			0.51	0.08	31	18	15	8.04	28.15	803.17	805.98	3617.96	296.89	4.67	7.29
Mytilus californianus (mollusk)	4.0	Mid Low pCO2	3235	2912	384	2625	273	8.23	4.76	0.58	0.02	0.11179	0.00029			0.50	0.07	31	18	15	8.12	17.01	485.36	487.06	2634.49	260.50	4.10	6.39
Control		Control	2229	1946	272	1735	202	8.19	3.25	0.66	0.05	0.10954	0.00443			0.76	0.09	31	18	15	8.19	9.51	271.32	272.26	1734.49	202.00	3.18	4.96