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Beemelmanns, Anne; Roth, Olivia (2015): Grandparental immune priming in S.typhle - Gene expression and Size of F2. PANGAEA, https://doi.org/10.1594/PANGAEA.846114, Supplement to: Beemelmanns, A; Roth, O (2017): Grandparental immune priming in the pipefish Syngnathus typhle. BMC Evolutionary Biology, 17(1), https://doi.org/10.1186/s12862-017-0885-3

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Abstract:
Data table shows life history (size-length) and gene expression measurements of 44 target genes and 4 housekepping genes for 192 samples (F2 juveniles) of the experiment "Grandparental immune priming in Syngnathus typhle". Gene expression was measured using Fluidigm chip systems in May 2014. Shown are the mean Ct values (Cycle time) of two technical replicates.
Comment:
Ct: The cycle number at which the fluorescence sigl associated with a particular gene amplicon crosses the threshold of 0.65.
Parameter(s):
#NameShort NameUnitPrincipal InvestigatorMethodComment
1Sample code/labelSample labelBeemelmanns, AnneFluidigm Chip Number
2NumberNoBeemelmanns, Anne
3ReplicateReplicateBeemelmanns, Anne
4TreatmentTreatBeemelmanns, AnneF0-Grandparental
5TreatmentTreatBeemelmanns, AnneF2-Grand-offspring
6Crystal sizeSize XXmmBeemelmanns, Anne
7Threshold cycle, quantitative polymerase chain reactionCt qPCRBeemelmanns, AnneLymphocyte antigen 75
8Threshold cycle, quantitative polymerase chain reactionCt qPCRBeemelmanns, AnneHuman immunodeficiency virus enhancer prot2
9Threshold cycle, quantitative polymerase chain reactionCt qPCRBeemelmanns, AnneHuman immunodeficiency virus enhancer prot3
10Threshold cycle, quantitative polymerase chain reactionCt qPCRBeemelmanns, AnneCD45 (leukocyte common antigen)
11Threshold cycle, quantitative polymerase chain reactionCt qPCRBeemelmanns, AnneIntegrin-beta 1
12Threshold cycle, quantitative polymerase chain reactionCt qPCRBeemelmanns, AnneImmunoglobulin light chain
13Threshold cycle, quantitative polymerase chain reactionCt qPCRBeemelmanns, AnneLectin protein type I
14Threshold cycle, quantitative polymerase chain reactionCt qPCRBeemelmanns, AnneLectin potein type II
15Threshold cycle, quantitative polymerase chain reactionCt qPCRBeemelmanns, AnneCoagulation factor II
16Threshold cycle, quantitative polymerase chain reactionCt qPCRBeemelmanns, AnneHeat shock protein 60
17Threshold cycle, quantitative polymerase chain reactionCt qPCRBeemelmanns, AnneIk cytokine(RED-protein)
18Threshold cycle, quantitative polymerase chain reactionCt qPCRBeemelmanns, AnneInterleukin 10
19Threshold cycle, quantitative polymerase chain reactionCt qPCRBeemelmanns, AnneKinesin
20Threshold cycle, quantitative polymerase chain reactionCt qPCRBeemelmanns, AnneNatural resistance-assoc macrophage protein
21Threshold cycle, quantitative polymerase chain reactionCt qPCRBeemelmanns, AnneAllograft inflammation factor
22Threshold cycle, quantitative polymerase chain reactionCt qPCRBeemelmanns, AnneTranslocator protein
23Threshold cycle, quantitative polymerase chain reactionCt qPCRBeemelmanns, AnneLPS-induced TNF-alpha factor (LITAF)
24Threshold cycle, quantitative polymerase chain reactionCt qPCRBeemelmanns, AnneTransferrin
25Threshold cycle, quantitative polymerase chain reactionCt qPCRBeemelmanns, AnneCalreticulin
26Threshold cycle, quantitative polymerase chain reactionCt qPCRBeemelmanns, AnneInterferon induced transmembrane protein 3
27Threshold cycle, quantitative polymerase chain reactionCt qPCRBeemelmanns, AnneInterleukin 8
28Threshold cycle, quantitative polymerase chain reactionCt qPCRBeemelmanns, AnneTap-binding protein (Tapasin)
29Threshold cycle, quantitative polymerase chain reactionCt qPCRBeemelmanns, AnnePeptidoglycan recognition protein II
30Threshold cycle, quantitative polymerase chain reactionCt qPCRBeemelmanns, AnneTyroproteinkinase
31Threshold cycle, quantitative polymerase chain reactionCt qPCRBeemelmanns, AnneChemokine 7
32Threshold cycle, quantitative polymerase chain reactionCt qPCRBeemelmanns, AnneLysine-specific-demethylase 5B
33Threshold cycle, quantitative polymerase chain reactionCt qPCRBeemelmanns, AnneLysine-specific-histone demethylase NO66
34Threshold cycle, quantitative polymerase chain reactionCt qPCRBeemelmanns, AnneLysine-specific demethylase 6A
35Threshold cycle, quantitative polymerase chain reactionCt qPCRBeemelmanns, AnneDNA-Methyltransferase 1
36Threshold cycle, quantitative polymerase chain reactionCt qPCRBeemelmanns, AnneDNA-Methyltransferase 3a
37Threshold cycle, quantitative polymerase chain reactionCt qPCRBeemelmanns, AnneDNA-Methyltransferase 3b
38Threshold cycle, quantitative polymerase chain reactionCt qPCRBeemelmanns, AnneN(6)-adenine-specific DNA methyltransferase 2
39Threshold cycle, quantitative polymerase chain reactionCt qPCRBeemelmanns, AnneHistone methyltransferase (ASH2)
40Threshold cycle, quantitative polymerase chain reactionCt qPCRBeemelmanns, AnneHistone-acetyltransferase (KAT2A)
41Threshold cycle, quantitative polymerase chain reactionCt qPCRBeemelmanns, AnneHistone-acetyltransferase (HAT1)
42Threshold cycle, quantitative polymerase chain reactionCt qPCRBeemelmanns, AnneHistone deacetylase 1-like
43Threshold cycle, quantitative polymerase chain reactionCt qPCRBeemelmanns, AnneHistone deacetylase 3-like
44Threshold cycle, quantitative polymerase chain reactionCt qPCRBeemelmanns, AnneHistone deacetylase 6-like
45Threshold cycle, quantitative polymerase chain reactionCt qPCRBeemelmanns, AnneTranscription-initiation-factor 8
46Threshold cycle, quantitative polymerase chain reactionCt qPCRBeemelmanns, AnneComplement component 3
47Threshold cycle, quantitative polymerase chain reactionCt qPCRBeemelmanns, AnneComplement component 1q
48Threshold cycle, quantitative polymerase chain reactionCt qPCRBeemelmanns, AnneComplement component 9
49Threshold cycle, quantitative polymerase chain reactionCt qPCRBeemelmanns, AnneDDP-glycosyltransferase
50Threshold cycle, quantitative polymerase chain reactionCt qPCRBeemelmanns, AnneDNA-Methyltransferase 3a
51Threshold cycle, quantitative polymerase chain reactionCt qPCRBeemelmanns, AnneGlucose 6-phosphate dehydrogenase (G6PD)
52Threshold cycle, quantitative polymerase chain reactionCt qPCRBeemelmanns, AnneLymphocyte cytosolic protein 2
53Threshold cycle, quantitative polymerase chain reactionCt qPCRBeemelmanns, AnneRibosomal protein
54Threshold cycle, quantitative polymerase chain reactionCt qPCRBeemelmanns, AnneUbiquitin
Size:
10211 data points

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