Haase, David (2015): The effect of repeated exposure to parasite genotypes of the eyefluke Diplostomum pseudospathaceum on infection rate and immunization in three-spined sticklebacks: RNA [dataset]. PANGAEA, https://doi.org/10.1594/PANGAEA.843813, In supplement to: Haase, David; Rieger, J K; Witten, A; Stoll, M; Bornberg-Bauer, E; Kalbe, M; Reusch, Thorsten B H (2016): Immunity comes first: The effect of parasite genotypes on adaptive immunity and immunization in three-spined sticklebacks. 54(1), 137-144, https://doi.org/10.1016/j.dci.2015.09.008
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Parameter(s):
# | Name | Short Name | Unit | Principal Investigator | Method/Device | Comment |
---|---|---|---|---|---|---|
1 | Sample code/label | Sample label | Haase, David | sample name | ||
2 | Number | No | Haase, David | Fish | ||
3 | Sample ID | Sample ID | Haase, David | Fish ID | ||
4 | Sample code/label | Sample label | Haase, David | Sibship | ||
5 | Replicate | Repl | Haase, David | |||
6 | Experimental treatment | Exp treat | Haase, David | pre-exposure | ||
7 | Experimental treatment | Exp treat | Haase, David | final exposure | ||
8 | Organ | Organ | Haase, David | |||
9 | Code | Code | Haase, David | lane number |
License:
Creative Commons Attribution 3.0 Unported (CC-BY-3.0)
Size:
832 data points
Data
1 Sample label (sample name) | 2 No (Fish) | 3 Sample ID (Fish ID) | 4 Sample label (Sibship) | 5 Repl | 6 Exp treat (pre-exposure) | 7 Exp treat (final exposure) | 8 Organ | 9 Code (lane number) |
---|---|---|---|---|---|---|---|---|
Sample_108_g | 108 | D24 | 10-10x15 | replicate 01 | Control | gills | L006 | |
Sample_108_hk | 108 | D24 | 10-10x15 | replicate 01 | Control | head_kidney | L005 | |
Sample_160_g | 160 | F22 | 10-10x15 | replicate 01 | Mix | gills | L007 | |
Sample_160_hk | 160 | F22 | 10-10x15 | replicate 01 | Mix | head_kidney | L001 | |
Sample_102_g | 102 | D18 | 10-10x15 | replicate 01 | PSV I | gills | L004 | |
Sample_102_hk | 102 | D18 | 10-10x15 | replicate 01 | PSV I | head_kidney | L005 | |
Sample_132_g | 132 | E20 | 10-10x15 | replicate 01 | PSV XII | gills | L008 | |
Sample_132_hk | 132 | E20 | 10-10x15 | replicate 01 | PSV XII | head_kidney | L008 | |
Sample_112_g | 112 | D28 | 10-10x15 | replicate 01 | Mix | Control | gills | L006 |
Sample_112_hk | 112 | D28 | 10-10x15 | replicate 01 | Mix | Control | head_kidney | L007 |
Sample_164_g | 164 | F26 | 10-10x15 | replicate 01 | Mix | Mix | gills | L008 |
Sample_164_hk | 164 | F26 | 10-10x15 | replicate 01 | Mix | Mix | head_kidney | L008 |
Sample_120_g | 120 | E8 | 10-10x15 | replicate 01 | PSV I | Control | gills | L005 |
Sample_120_hk | 120 | E8 | 10-10x15 | replicate 01 | PSV I | Control | head_kidney | L007 |
Sample_118_g | 118 | E6 | 10-10x15 | replicate 01 | PSV I | Mix | gills | L007 |
Sample_118_hk | 118 | E6 | 10-10x15 | replicate 01 | PSV I | Mix | head_kidney | L008 |
Sample_114_g | 114 | E2 | 10-10x15 | replicate 01 | PSV I | PSV I | gills | L006 |
Sample_114_hk | 114 | E2 | 10-10x15 | replicate 01 | PSV I | PSV I | head_kidney | L006 |
Sample_100_g | 100 | D16 | 10-10x15 | replicate 01 | PSV XII | Control | gills | L003 |
Sample_100_hk | 100 | D16 | 10-10x15 | replicate 01 | PSV XII | Control | head_kidney | L004 |
Sample_098_g | 98 | D14 | 10-10x15 | replicate 01 | PSV XII | Mix | gills | L005 |
Sample_098_hk | 98 | D14 | 10-10x15 | replicate 01 | PSV XII | Mix | head_kidney | L006 |
Sample_124_g | 124 | E12 | 10-10x15 | replicate 01 | PSV XII | PSV XII | gills | L008 |
Sample_124_hk | 124 | E12 | 10-10x15 | replicate 01 | PSV XII | PSV XII | head_kidney | L007 |
Sample_135_g | 135 | E23 | 10-11x16 | replicate 02 | Control | gills | L008 | |
Sample_135_hk | 135 | E23 | 10-11x16 | replicate 02 | Control | head_kidney | L008 | |
Sample_159_g | 159 | F21 | 10-11x16 | replicate 02 | Mix | gills | L006 | |
Sample_159_hk | 159 | F21 | 10-11x16 | replicate 02 | Mix | head_kidney | L008 | |
Sample_129_g | 129 | E17 | 10-11x16 | replicate 02 | PSV I | gills | L008 | |
Sample_129_hk | 129 | E17 | 10-11x16 | replicate 02 | PSV I | head_kidney | L007 | |
Sample_131_g | 131 | E19 | 10-11x16 | replicate 02 | PSV XII | gills | L007 | |
Sample_131_hk | 131 | E19 | 10-11x16 | replicate 02 | PSV XII | head_kidney | L008 | |
Sample_111_g | 111 | D27 | 10-11x16 | replicate 02 | Mix | Control | gills | L005 |
Sample_111_hk | 111 | D27 | 10-11x16 | replicate 02 | Mix | Control | head_kidney | L006 |
Sample_137_g | 137 | E25 | 10-11x16 | replicate 02 | Mix | Mix | gills | L008 |
Sample_137_hk | 137 | E25 | 10-11x16 | replicate 02 | Mix | Mix | head_kidney | L001 |
Sample_147_g | 147 | F7 | 10-11x16 | replicate 02 | PSV I | Control | gills | L005 |
Sample_147_hk | 147 | F7 | 10-11x16 | replicate 02 | PSV I | Control | head_kidney | L007 |
Sample_117_g | 117 | E5 | 10-11x16 | replicate 02 | PSV I | Mix | gills | L007 |
Sample_117_hk | 117 | E5 | 10-11x16 | replicate 02 | PSV I | Mix | head_kidney | L007 |
Sample_085_g | 85 | D1 | 10-11x16 | replicate 02 | PSV I | PSV I | gills | L004 |
Sample_085_hk | 85 | D1 | 10-11x16 | replicate 02 | PSV I | PSV I | head_kidney | L003 |
Sample_099_g | 99 | D15 | 10-11x16 | replicate 02 | PSV XII | Control | gills | L005 |
Sample_099_hk | 99 | D15 | 10-11x16 | replicate 02 | PSV XII | Control | head_kidney | L004 |
Sample_125_g | 125 | E13 | 10-11x16 | replicate 02 | PSV XII | Mix | gills | L007 |
Sample_125_hk | 125 | E13 | 10-11x16 | replicate 02 | PSV XII | Mix | head_kidney | L006 |
Sample_123_g | 123 | E11 | 10-11x16 | replicate 02 | PSV XII | PSV XII | gills | L006 |
Sample_123_hk | 123 | E11 | 10-11x16 | replicate 02 | PSV XII | PSV XII | head_kidney | L005 |
Sample_024_g | 24 | A24 | 10-13x12 | replicate 03 | Control | gills | L001 | |
Sample_024_hk | 24 | A24 | 10-13x12 | replicate 03 | Control | head_kidney | L002 | |
Sample_078_g | 78 | C22 | 10-13x12 | replicate 03 | Mix | gills | L004 | |
Sample_078_hk | 78 | C22 | 10-13x12 | replicate 03 | Mix | head_kidney | L005 | |
Sample_018_g | 18 | A18 | 10-13x12 | replicate 03 | PSV I | gills | L004 | |
Sample_018_hk | 18 | A18 | 10-13x12 | replicate 03 | PSV I | head_kidney | L004 | |
Sample_020_g | 20 | A20 | 10-13x12 | replicate 03 | PSV XII | gills | L006 | |
Sample_020_hk | 20 | A20 | 10-13x12 | replicate 03 | PSV XII | head_kidney | L003 | |
Sample_028_g | 28 | A28 | 10-13x12 | replicate 03 | Mix | Control | gills | L007 |
Sample_028_hk | 28 | A28 | 10-13x12 | replicate 03 | Mix | Control | head_kidney | L002 |
Sample_026_g | 26 | A26 | 10-13x12 | replicate 03 | Mix | Mix | gills | L002 |
Sample_026_hk | 26 | A26 | 10-13x12 | replicate 03 | Mix | Mix | head_kidney | L005 |
Sample_008_g | 8 | A8 | 10-13x12 | replicate 03 | PSV I | Control | gills | L001 |
Sample_008_hk | 8 | A8 | 10-13x12 | replicate 03 | PSV I | Control | head_kidney | L001 |
Sample_006_g | 6 | A6 | 10-13x12 | replicate 03 | PSV I | Mix | gills | L001 |
Sample_006_hk | 6 | A6 | 10-13x12 | replicate 03 | PSV I | Mix | head_kidney | L001 |
Sample_030_g | 30 | B2 | 10-13x12 | replicate 03 | PSV I | PSV I | gills | L003 |
Sample_030_hk | 30 | B2 | 10-13x12 | replicate 03 | PSV I | PSV I | head_kidney | L006 |
Sample_016_g | 16 | A16 | 10-13x12 | replicate 03 | PSV XII | Control | gills | L001 |
Sample_016_hk | 16 | A16 | 10-13x12 | replicate 03 | PSV XII | Control | head_kidney | L003 |
Sample_042_g | 42 | B14 | 10-13x12 | replicate 03 | PSV XII | Mix | gills | L004 |
Sample_042_hk | 42 | B14 | 10-13x12 | replicate 03 | PSV XII | Mix | head_kidney | L003 |
Sample_012_g | 12 | A12 | 10-13x12 | replicate 03 | PSV XII | PSV XII | gills | L003 |
Sample_012_hk | 12 | A12 | 10-13x12 | replicate 03 | PSV XII | PSV XII | head_kidney | L002 |
Sample_023_g | 23 | A23 | 10-2x1 | replicate 04 | Control | gills | L002 | |
Sample_023_hk | 23 | A23 | 10-2x1 | replicate 04 | Control | head_kidney | L004 | |
Sample_077_g | 77 | C21 | 10-2x1 | replicate 04 | Mix | gills | L003 | |
Sample_077_hk | 77 | C21 | 10-2x1 | replicate 04 | Mix | head_kidney | L006 | |
Sample_017_g | 17 | A17 | 10-2x1 | replicate 04 | PSV I | gills | L003 | |
Sample_017_hk | 17 | A17 | 10-2x1 | replicate 04 | PSV I | head_kidney | L003 | |
Sample_019_g | 19 | A19 | 10-2x1 | replicate 04 | PSV XII | gills | L005 | |
Sample_019_hk | 19 | A19 | 10-2x1 | replicate 04 | PSV XII | head_kidney | L001 | |
Sample_027_g | 27 | A27 | 10-2x1 | replicate 04 | Mix | Control | gills | L003 |
Sample_027_hk | 27 | A27 | 10-2x1 | replicate 04 | Mix | Control | head_kidney | L004 |
Sample_053_g | 53 | B25 | 10-2x1 | replicate 04 | Mix | Mix | gills | L002 |
Sample_053_hk | 53 | B25 | 10-2x1 | replicate 04 | Mix | Mix | head_kidney | L002 |
Sample_007_g | 7 | A7 | 10-2x1 | replicate 04 | PSV I | Control | gills | L002 |
Sample_007_hk | 7 | A7 | 10-2x1 | replicate 04 | PSV I | Control | head_kidney | L002 |
Sample_061_g | 61 | C5 | 10-2x1 | replicate 04 | PSV I | Mix | gills | L001 |
Sample_061_hk | 61 | C5 | 10-2x1 | replicate 04 | PSV I | Mix | head_kidney | L005 |
Sample_001_g | 1 | A1 | 10-2x1 | replicate 04 | PSV I | PSV I | gills | L001 |
Sample_001_hk | 1 | A1 | 10-2x1 | replicate 04 | PSV I | PSV I | head_kidney | L001 |
Sample_071_g | 71 | C15 | 10-2x1 | replicate 04 | PSV XII | Control | gills | L002 |
Sample_071_hk | 71 | C15 | 10-2x1 | replicate 04 | PSV XII | Control | head_kidney | L004 |
Sample_041_g | 41 | B13 | 10-2x1 | replicate 04 | PSV XII | Mix | gills | L004 |
Sample_041_hk | 41 | B13 | 10-2x1 | replicate 04 | PSV XII | Mix | head_kidney | L003 |
Sample_011_g | 11 | A11 | 10-2x1 | replicate 04 | PSV XII | PSV XII | gills | L002 |
Sample_011_hk | 11 | A11 | 10-2x1 | replicate 04 | PSV XII | PSV XII | head_kidney | L002 |