Citation:

PANGAEA.842216

Name: Distribution of sea urchins living near shallow water CO2 vents is dependent upon species acid-base and ion-regulatory abilities
Published: 2013
License: https://creativecommons.org/licenses/by/3.0/
Keywords: Acid-base regulation; Animalia; Arbacia lixula; Benthic animals; Benthos; Biomass/Abundance/Elemental composition; Bottles or small containers/Aquaria (<20 L); CO2 vent; Coast and continental shelf; Echinodermata; Field experiment; Mediterranean Sea; Paracentrotus lividus; Single species; Temperate

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Published: 2013 (exact date unknown) • DOI registered: 2015-03-03

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Keyword(s):

Acid-base regulation; Animalia; Arbacia lixula; Benthic animals; Benthos; Biomass/Abundance/Elemental composition; Bottles or small containers/Aquaria (<20 L); CO2 vent; Coast and continental shelf; Echinodermata; Field experiment; Mediterranean Sea; Paracentrotus lividus; Single species; Temperate

Related to:

Calosi, Piero; Rastrick, S P S; Graziano, M; Thomas, S C; Baggini, Cecilia; Carter, H A; Hall-Spencer, Jason M; Milazzo, Marco; Spicer, John I (2013): Distribution of sea urchins living near shallow water CO2 vents is dependent upon species acid–base and ion-regulatory abilities. Marine Pollution Bulletin, 73(2), 470-484, https://doi.org/10.1016/j.marpolbul.2012.11.040

Original version:

Calosi, Piero; Rastrick, S P S; Graziano, M; Thomas, S C; Baggini, Cecilia; Carter, H A; Spicer, John I; Jarrold, Michael (2014): UKOA Benthic consortium study of acid-base and ion-regulatory abilities of sea urchins near shallow CO2 vents [dataset]. British Oceanographic Data Centre, Natural Environment Research Council, https://doi.org/10.5285/08c0db6e-a39b-5d93-e053-6c86abc07e29

Further details:

Lavigne, Héloïse; Epitalon, Jean-Marie; Gattuso, Jean-Pierre (2014): seacarb: seawater carbonate chemistry with R. R package version 3.0 [webpage]. https://cran.r-project.org/package=seacarb

Project(s):

Ocean Acidification International Coordination Centre (OA-ICC)

United Kingdom Ocean Acidification research programme (UKOA)

Funding:

Natural Environment Research Council (NERC), grant/award no. NE/H017305/1 : Impacts of ocean acidification on key benthic ecosystems, communities, habitats, species and life cycles

Coverage:

Latitude: 38.416670 * Longitude: 14.950000

Date/Time Start: 2011-05-20T00:00:00 * Date/Time End: 2011-05-30T00:00:00

Event(s):

Levante_Bay_Vulcano * Latitude: 38.416670 * Longitude: 14.950000 * Date/Time Start: 2011-05-20T00:00:00 * Date/Time End: 2011-05-30T00:00:00 * Method/Device: Experiment (EXP)

Comment:

In order to allow full comparability with other ocean acidification data sets, the R package seacarb (Lavigne et al, 2014) was used to compute a complete and consistent set of carbonate system variables, as described by Nisumaa et al. (2010). In this dataset the original values were archived in addition with the recalculated parameters (see related PI). The date of carbonate chemistry calculation is 2015-01-29.

Parameter(s):

#	Name	Short Name	Unit	Principal Investigator	Method/Device	Comment
1	Species	Species		Calosi, Piero
2	Table	Tab		Calosi, Piero
3	Figure	Fig		Calosi, Piero
4	Area/locality	Area		Calosi, Piero		pH
5	Area/locality	Area		Calosi, Piero
6	Replicate	Repl		Calosi, Piero
7	Abundance per area	Abund a	#/m²	Calosi, Piero
8	Experiment	Exp		Calosi, Piero
9	Treatment	Treat		Calosi, Piero
10	Time in hours	Time	h	Calosi, Piero
11	Coelomic fluid, pH	pH (cf)		Calosi, Piero
12	Coelomic fluid, carbon, inorganic, dissolved	DIC (cf)	mmol/l	Calosi, Piero
13	Coelomic fluid, partial pressure of carbon dioxide	pCO2 (cf)	Torr	Calosi, Piero
14	Coelomic fluid, partial pressure of carbon dioxide	pCO2 (cf)	kPa	Calosi, Piero
15	Coelomic fluid, bicarbonate ion	[HCO3]- (cf)	mmol/l	Calosi, Piero
16	Time in days	Time	days	Calosi, Piero
17	Tissues	Tissues		Calosi, Piero
18	Calcium ion	Ca2+	mmol/l	Calosi, Piero
19	Calcium, standard error	Ca std e	±	Calosi, Piero
20	Magnesium ion	Mg2+	mmol/l	Calosi, Piero
21	Magnesium, standard error	Mg std e	±	Calosi, Piero
22	Strontium	Sr	µmol/l	Calosi, Piero
23	Strontium, standard error	Sr std e	±	Calosi, Piero
24	Sodium ion	Na+	mmol/l	Calosi, Piero
25	Sodium, standard error	Na std e	±	Calosi, Piero
26	Potassium ion	K+	mmol/l	Calosi, Piero
27	Potassium, standard error	K+ std e	±	Calosi, Piero
28	Calcium	Ca2+	mmol/kg	Calosi, Piero
29	Calcium, standard error	Ca std e	±	Calosi, Piero
30	Magnesium	Mg2+	mmol/kg	Calosi, Piero
31	Magnesium, standard error	Mg std e	±	Calosi, Piero
32	Strontium	Sr2+	mmol/kg	Calosi, Piero
33	Strontium, standard error	Sr std e	±	Calosi, Piero
34	Salinity	Sal		Calosi, Piero
35	Temperature, water	Temp	°C	Calosi, Piero
36	Temperature, water, standard deviation	Temp std dev	±	Calosi, Piero
37	Alkalinity, total	AT	µmol/kg	Calosi, Piero
38	pH, NBS scale	pH NBS		Calosi, Piero	Potentiometric	NBS scale
39	pH, standard deviation	pH std dev	±	Calosi, Piero	Potentiometric	NBS scale
40	Carbonate system computation flag	CSC flag		Yang, Yan	Calculated using seacarb after Nisumaa et al. (2010)
41	pH, total scale	pHT		Yang, Yan	Calculated using seacarb after Nisumaa et al. (2010)	total scale
42	Carbon dioxide	CO2	µmol/kg	Yang, Yan	Calculated using seacarb after Nisumaa et al. (2010)
43	Fugacity of carbon dioxide (water) at sea surface temperature (wet air)	fCO2water_SST_wet	µatm	Yang, Yan	Calculated using seacarb after Nisumaa et al. (2010)
44	Partial pressure of carbon dioxide (water) at sea surface temperature (wet air)	pCO2water_SST_wet	µatm	Yang, Yan	Calculated using seacarb after Nisumaa et al. (2010)
45	Bicarbonate ion	[HCO3]-	µmol/kg	Yang, Yan	Calculated using seacarb after Nisumaa et al. (2010)
46	Carbonate ion	[CO3]2-	µmol/kg	Yang, Yan	Calculated using seacarb after Nisumaa et al. (2010)
47	Carbon, inorganic, dissolved	DIC	µmol/kg	Yang, Yan	Calculated using seacarb after Nisumaa et al. (2010)
48	Aragonite saturation state	Omega Arg		Yang, Yan	Calculated using seacarb after Nisumaa et al. (2010)
49	Calcite saturation state	Omega Cal		Yang, Yan	Calculated using seacarb after Nisumaa et al. (2010)

License:

Creative Commons Attribution 3.0 Unported (CC-BY-3.0)

Status:

Curation Level: Enhanced curation (CurationLevelC)

Size:

8940 data points

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Datasets with similar metadata

Collard, M; De Ridder, C; David, B et al. (2015): Could the acid-base status of Antarctic sea urchins indicate a better-than-expected resilience to near-future ocean acidification? https://doi.org/10.1594/PANGAEA.839887
Calosi, P; Rastrick, SPS; Lombardi, C et al. (2013): Adaptation and acclimatization to ocean acidification in marine ectotherms: an in situ transplant experiment with polychaetes at a shallow CO2 vent system. https://doi.org/10.1594/PANGAEA.842378
Garilli, V; Rodolfo-Metalpa, R; Scuderi, D et al. (2015): Physiological advantages of dwarfing in surviving extinctions in high-CO2 oceans. https://doi.org/10.1594/PANGAEA.847397

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