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Johnson, Maggie Dorothy; Price, Nichole N; Smith, Jennifer E (2014): Contrasting effects of ocean acidification on tropical fleshy and calcareous algae [dataset]. PANGAEA, https://doi.org/10.1594/PANGAEA.838995, Supplement to: Johnson, MD et al. (2014): Contrasting effects of ocean acidification on tropical fleshy and calcareous algae. PeerJ, 2, e411, https://doi.org/10.7717/peerj.411

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Abstract:
Despite the heightened awareness of ocean acidification (OA) effects on marine organisms, few studies empirically juxtapose biological responses to CO2 manipulations across functionally distinct primary producers, particularly benthic algae. Algal responses to OA may vary because increasing CO2 has the potential to fertilize photosynthesis but impair biomineralization. Using a series of repeated experiments on Palmyra Atoll, simulated OA effects were tested across a suite of ecologically important coral reef algae, including five fleshy and six calcareous species. Growth, calcification and photophysiology were measured for each species independently and metrics were combined from each experiment using a meta-analysis to examine overall trends across functional groups categorized as fleshy, upright calcareous, and crustose coralline algae (CCA). The magnitude of the effect of OA on algal growth response varied by species, but the direction was consistent within functional groups. Exposure to OA conditions generally enhanced growth in fleshy macroalgae, reduced net calcification in upright calcareous algae, and caused net dissolution in CCA. Additionally, three of the five fleshy seaweeds tested became reproductive upon exposure to OA conditions. There was no consistent effect of OA on algal photophysiology. Our study provides experimental evidence to support the hypothesis that OA will reduce the ability of calcareous algae to biomineralize. Further, we show that CO2 enrichment either will stimulate population or somatic growth in some species of fleshy macroalgae. Thus, our results suggest that projected OA conditions may favor non-calcifying algae and influence the relative dominance of fleshy macroalgae on reefs, perpetuating or exacerbating existing shifts in reef community structure.
Keyword(s):
Acanthophora spicifera; Avrainvillea amadelpha; Benthos; Bottles or small containers/Aquaria (<20 L); Caulerpa serrulata; Chlorophyta; Coast and continental shelf; Dichotomaria marginata; Dictyota bartayresiana; Galaxaura rugosa; Growth/Morphology; Halimeda opuntia; Halimeda taenicola; Hypnea pannosa; Laboratory experiment; Lithophyllum prototypum; Lithophyllum sp.; Macroalgae; North Pacific; Ochrophyta; Plantae; Primary production/Photosynthesis; Rhodophyta; Single species; Tropical
Further details:
Lavigne, Héloïse; Epitalon, Jean-Marie; Gattuso, Jean-Pierre (2014): seacarb: seawater carbonate chemistry with R. R package version 3.0. https://cran.r-project.org/package=seacarb
Comment:
In order to allow full comparability with other ocean acidification data sets, the R package seacarb (Lavigne et al, 2014) was used to compute a complete and consistent set of carbonate system variables, as described by Nisumaa et al. (2010). In this dataset the original values were archived in addition with the recalculated parameters (see related PI). The date of carbonate chemistry calculation is 2014-11-18.
Parameter(s):
#NameShort NameUnitPrincipal InvestigatorMethod/DeviceComment
TableTabJohnson, Maggie Dorothy
SpeciesSpeciesJohnson, Maggie Dorothy
SpeciesSpeciesJohnson, Maggie Dorothy
ExperimentExpJohnson, Maggie Dorothy
TreatmentTreatJohnson, Maggie Dorothy
ReplicatesRepl#Johnson, Maggie Dorothygrowth rate
Growth rateµmg/g/dayJohnson, Maggie Dorothy
Growth rate, standard errorµ std e±Johnson, Maggie Dorothy
ReplicatesRepl#Johnson, Maggie Dorothyphotosynthetic parameters
10 Run NumberRun#Johnson, Maggie DorothyRLCs
11 Maximal electron transport rate, relativerETR maxµmol e/m2/sJohnson, Maggie Dorothy
12 Maximal electron transport rate, relative, standard errorrETR max std e±Johnson, Maggie Dorothy
13 Photosynthetic efficiencyalphaµmol electrons/µmol quantaJohnson, Maggie Dorothy
14 Photosynthetic efficiency, standard erroralpha std e±Johnson, Maggie Dorothy
15 Photoinhibitionbetaµmol electrons/µmol quantaJohnson, Maggie Dorothy
16 Photoinhibition, standard errorbeta std e±Johnson, Maggie Dorothy
17 Temperature, waterTemp°CJohnson, Maggie Dorothy
18 ReplicatesRepl#Johnson, Maggie Dorothycarboante chemistry
19 SalinitySalJohnson, Maggie Dorothy
20 Salinity, standard errorSal std e±Johnson, Maggie Dorothy
21 Alkalinity, totalATµmol/kgJohnson, Maggie DorothyPotentiometric titration
22 Alkalinity, total, standard errorAT std e±Johnson, Maggie DorothyPotentiometric titration
23 Carbon, inorganic, dissolvedDICµmol/kgJohnson, Maggie DorothyCoulometric titration
24 Carbon, inorganic, dissolved, standard errorDIC std e±Johnson, Maggie DorothyCoulometric titration
25 pHpHJohnson, Maggie DorothyCalculated using CO2SYSseawater scale
26 pH, standard errorpH std e±Johnson, Maggie DorothyCalculated using CO2SYSseawater scale
27 Partial pressure of carbon dioxide (water) at sea surface temperature (wet air)pCO2water_SST_wetµatmJohnson, Maggie DorothyCalculated using CO2SYS
28 Partial pressure of carbon dioxide (water) at sea surface temperature (wet air), standard errorpCO2water_SST_wet std e±Johnson, Maggie DorothyCalculated using CO2SYS
29 Bicarbonate ion[HCO3]-µmol/kgJohnson, Maggie DorothyCalculated using CO2SYS
30 Bicarbonate ion, standard error[HCO3]- std e±Johnson, Maggie DorothyCalculated using CO2SYS
31 Carbonate ion[CO3]2-µmol/kgJohnson, Maggie DorothyCalculated using CO2SYS
32 Carbonate ion, standard error[CO3]2- std e±Johnson, Maggie DorothyCalculated using CO2SYS
33 Calcite saturation stateOmega CalJohnson, Maggie DorothyCalculated using CO2SYS
34 Calcite saturation state, standard errorOmega Cal std e±Johnson, Maggie DorothyCalculated using CO2SYS
35 Aragonite saturation stateOmega ArgJohnson, Maggie DorothyCalculated using CO2SYS
36 Aragonite saturation state, standard errorOmega Arg std e±Johnson, Maggie DorothyCalculated using CO2SYS
37 Carbonate system computation flagCSC flagYang, YanCalculated using seacarb after Nisumaa et al. (2010)
38 pHpHYang, YanCalculated using seacarb after Nisumaa et al. (2010)total scale
39 Carbon dioxideCO2µmol/kgYang, YanCalculated using seacarb after Nisumaa et al. (2010)
40 Partial pressure of carbon dioxide (water) at sea surface temperature (wet air)pCO2water_SST_wetµatmYang, YanCalculated using seacarb after Nisumaa et al. (2010)
41 Fugacity of carbon dioxide (water) at sea surface temperature (wet air)fCO2water_SST_wetµatmYang, YanCalculated using seacarb after Nisumaa et al. (2010)
42 Bicarbonate ion[HCO3]-µmol/kgYang, YanCalculated using seacarb after Nisumaa et al. (2010)
43 Carbonate ion[CO3]2-µmol/kgYang, YanCalculated using seacarb after Nisumaa et al. (2010)
44 Aragonite saturation stateOmega ArgYang, YanCalculated using seacarb after Nisumaa et al. (2010)
45 Calcite saturation stateOmega CalYang, YanCalculated using seacarb after Nisumaa et al. (2010)
Status:
Curation Level: Enhanced curation (CurationLevelC)
Size:
2271 data points

Data

Download dataset as tab-delimited text — use the following character encoding:


Tab

Species

Species

Exp

Treat

Repl [#]
(growth rate)

µ [mg/g/day]

µ std e [±]

Repl [#]
(photosynthetic parameters)
10 
Run [#]
(RLCs)
11 
rETR max [µmol e/m2/s]
12 
rETR max std e [±]
13 
alpha [µmol electrons/µmol quanta]
14 
alpha std e [±]
15 
beta [µmol electrons/µmol quanta]
16 
beta std e [±]
17 
Temp [°C]
18 
Repl [#]
(carboante chemistry)
19 
Sal
20 
Sal std e [±]
21 
AT [µmol/kg]
(Potentiometric titration)
22 
AT std e [±]
(Potentiometric titration)
23 
DIC [µmol/kg]
(Coulometric titration)
24 
DIC std e [±]
(Coulometric titration)
25 
pH
(seawater scale, Calculated us...)
26 
pH std e [±]
(seawater scale, Calculated us...)
27 
pCO2water_SST_wet [µatm]
(Calculated using CO2SYS)
28 
pCO2water_SST_wet std e [±]
(Calculated using CO2SYS)
29 
[HCO3]- [µmol/kg]
(Calculated using CO2SYS)
30 
[HCO3]- std e [±]
(Calculated using CO2SYS)
31 
[CO3]2- [µmol/kg]
(Calculated using CO2SYS)
32 
[CO3]2- std e [±]
(Calculated using CO2SYS)
33 
Omega Cal
(Calculated using CO2SYS)
34 
Omega Cal std e [±]
(Calculated using CO2SYS)
35 
Omega Arg
(Calculated using CO2SYS)
36 
Omega Arg std e [±]
(Calculated using CO2SYS)
37 
CSC flag
(Calculated using seacarb afte...)
38 
pH
(total scale, Calculated using...)
39 
CO2 [µmol/kg]
(Calculated using seacarb afte...)
40 
pCO2water_SST_wet [µatm]
(Calculated using seacarb afte...)
41 
fCO2water_SST_wet [µatm]
(Calculated using seacarb afte...)
42 
[HCO3]- [µmol/kg]
(Calculated using seacarb afte...)
43 
[CO3]2- [µmol/kg]
(Calculated using seacarb afte...)
44 
Omega Arg
(Calculated using seacarb afte...)
45 
Omega Cal
(Calculated using seacarb afte...)
S4Fleshy macroalgaeAcanthophora spicifera (macroalga)2010 ExperimentsAmbient air6-35.23013.52020334.80.012132321984297.820.016591718502711342.70.101.80.10157.8321.18655.09652.901850.11112.711.752.70
S4Fleshy macroalgaeAcanthophora spicifera (macroalga)2010 ExperimentsHigh pCO26-12.21014.66020334.80.012224202237287.340.14253090621091147121.10.300.70.20157.3474.842314.602306.852120.2641.900.651.00
S4Fleshy macroalgaeAvrainvillea amadelpha (macroalga)2012 ExperimentsAmbient air105.9502.49020235.20.202124581922197.940.084869017624144263.40.602.20.40157.9615.15469.46467.891762.89143.962.233.44
S4Fleshy macroalgaeAvrainvillea amadelpha (macroalga)2012 ExperimentsHigh pCO27-4.2402.76020235.00.10226713213497.770.01799121999710922.60.101.70.03157.7825.92802.45799.762000.11107.971.682.58
S4Fleshy macroalgaeCaulerpa serrulata (macroalga)2010 ExperimentsAmbient air61.9802.43020334.70.10220530195198.040.0538042175818180184.30.402.80.30158.0612.04372.28371.031759.87179.092.794.29
S4Fleshy macroalgaeCaulerpa serrulata (macroalga)2010 ExperimentsHigh pCO2619.4103.26020334.80.022215332072427.780.12818222193162115302.80.701.80.50157.8123.30720.64718.221936.46112.241.752.69
S4Fleshy macroalgaeCaulerpa serrulata (macroalga)2011 ExperimentsAmbient air47.51010.82020435.20.042128221899447.990.08443109172359161203.90.502.50.30158.0113.02403.50402.151725.52160.472.493.83
S4Fleshy macroalgaeCaulerpa serrulata (macroalga)2011 ExperimentsHigh pCO23-16.4306.46020435.20.102125312023537.660.16119736218907394332.20.801.50.50157.7029.25906.61903.571906.5687.191.352.08
S4Fleshy macroalgaeDictyota bartayresiana (macroalga)2011 ExperimentsAmbient air511.0903.62020435.10.052107381821518.120.032963316165719594.70.203.00.10158.139.39290.79289.821616.58195.043.034.66
S4Fleshy macroalgaeDictyota bartayresiana (macroalga)2011 ExperimentsHigh pCO2522.6004.03020335.20.022128341903407.990.0643162173150159183.80.402.50.30158.0013.31412.67411.281731.66158.022.453.77
S4Fleshy macroalgaeHypnea pannosa (macroalga)2011 ExperimentsAmbient air31.3108.36020335.20.1021781816771008.420.15157761320168342718.21.705.31.10158.443.75116.21115.821338.15335.105.208.00
S4Fleshy macroalgaeHypnea pannosa (macroalga)2011 ExperimentsHigh pCO2418.2004.45020435.10.0321593717311358.240.295204181420218294987.02.304.61.50158.355.04156.26155.741438.55287.414.466.87
S4Upright calcareous algaeDichotomaria marginata (macroalga)2011 ExperimentsAmbient air519.9603.66020435.10.03197410515931518.300.10186641341173246265.90.603.80.40158.315.07157.11156.591339.92248.003.855.92
S4Upright calcareous algaeDichotomaria marginata (macroalga)2011 ExperimentsHigh pCO250.3673.57020435.10.04173510013851538.300.14181771165178214335.10.803.30.50158.314.40136.20135.751164.52216.083.365.16
S4Upright calcareous algaeGalaxaura rugosa (macroalga)2010 ExperimentsAmbient air61.3801.42020334.70.012148391977547.880.0658986183161127133.00.302.00.20157.8918.46570.76568.851831.96126.581.973.03
S4Upright calcareous algaeGalaxaura rugosa (macroalga)2010 ExperimentsHigh pCO26-9.0806.25020334.80.04251414324851137.460.172215899234210971221.70.501.10.30157.4861.221893.441887.102360.3163.470.991.52
S4Upright calcareous algaeHalimeda opuntia (macroalga)2009 ExperimentsAmbient air46.5901.65020334.80.10222110199447.990.02440171817416353.90.102.50.10158.0014.15437.76436.291817.14162.712.533.90
S4Upright calcareous algaeHalimeda opuntia (macroalga)2009 ExperimentsHigh pCO24-7.9601.11020334.80.1022365214097.670.031014752019118852.10.101.40.10157.6832.661009.961006.582020.1887.161.362.09
S4Upright calcareous algaeHalimeda opuntia (macroalga)2011 ExperimentsAmbient air525.3702.93020435.10.1059568596537.220.241116470546511370.30.200.20.10157.2325.48789.21786.57561.848.680.130.21
S4Upright calcareous algaeHalimeda opuntia (macroalga)2011 ExperimentsHigh pCO2512.4002.07020435.00.038181318701517.020.142178816791132820.20.050.10.03156.9767.102077.592070.64796.296.610.100.16
S4Upright calcareous algaeHalimeda taenicola (macroalga)2009 ExperimentsAmbient air48.0200.20420334.80.10222110199447.990.02440171817416353.90.102.50.10158.0014.15437.76436.291817.14162.712.533.90
S4Upright calcareous algaeHalimeda taenicola (macroalga)2009 ExperimentsHigh pCO240.8851.19020334.80.1022365214097.670.031014752019118852.10.101.40.10157.6832.661009.961006.582020.1887.161.362.09
S4Upright calcareous algaeHalimeda taenicola (macroalga)2010 ExperimentsAmbient air643.32018.53020334.80.0315638515071047.560.251330815140510259221.40.500.90.30157.5928.41878.55875.601428.4950.100.781.20
S4Upright calcareous algaeHalimeda taenicola (macroalga)2010 ExperimentsHigh pCO2637.52018.03020334.80.041759911733827.450.041365721646784461.00.100.70.10157.4743.591348.121343.601646.0643.350.671.04
S4Upright calcareous algaeHalimeda taenicola (macroalga)2012 ExperimentsAmbient air1023.3103.30020235.00.0418891391665368.000.21400183149924152663.61.602.41.00158.0410.63329.18328.071505.28149.082.323.56
S4Upright calcareous algaeHalimeda taenicola (macroalga)2012 ExperimentsHigh pCO21025.9702.82020234.90.10157344415703297.290.4623141573144533650431.21.000.80.70157.3749.501531.611526.481489.2131.300.490.75
S4Crustose coralline algaeLithophyllum sp. (macroalga)2009 ExperimentsAmbient air40.1940.03320334.80.10222110199447.990.02440171817416353.90.102.50.10158.0014.15437.76436.291817.14162.712.533.90
S4Crustose coralline algaeLithophyllum sp. (macroalga)2009 ExperimentsHigh pCO24-0.1650.08120334.80.1022365214097.670.031014752019118852.10.101.40.10157.6832.661009.961006.582020.1887.161.362.09
S4Crustose coralline algaeLithophyllum sp. (macroalga)2011 ExperimentsAmbient air50.2280.07620435.00.011995501798387.950.024331316472913793.30.202.10.10157.9713.87429.35427.911647.25136.882.133.27
S4Crustose coralline algaeLithophyllum sp. (macroalga)2011 ExperimentsHigh pCO25-0.1960.09720435.20.042104382021227.630.08110822819071979121.90.301.20.20157.6533.271031.101027.651910.7377.001.191.84
S4Crustose coralline algaeLithophyllum prototypum (macroalga)2009 ExperimentsAmbient air40.2660.13520334.80.10222110199447.990.02440171817416353.90.102.50.10158.0014.15437.76436.291817.14162.712.533.90
S4Crustose coralline algaeLithophyllum prototypum (macroalga)2009 ExperimentsHigh pCO24-0.2400.12220334.80.1022365214097.670.031014752019118852.10.101.40.10157.6832.661009.961006.582020.1887.161.362.09
S5Fleshy MacroalgaeAcanthophora spicifera (macroalga)2010 ExperimentsAmbient air6212.761.490.300.0400.01000.002020334.80.012132321984297.820.016591718502711342.70.101.80.10157.8321.18655.09652.901850.11112.711.752.70
S5Fleshy MacroalgaeAcanthophora spicifera (macroalga)2010 ExperimentsHigh pCO2528.330.600.320.0100.00900.002020334.80.012224202237287.340.14253090621091147121.10.300.70.20157.3474.842314.602306.852120.2641.900.651.00
S5Fleshy MacroalgaeCaulerpa serrulata (macroalga)2010 ExperimentsAmbient air6217.301.190.440.0040.07000.009020334.70.10220530195198.040.0538042175818180184.30.402.80.30158.0612.04372.28371.031759.87179.092.794.29
S5Fleshy MacroalgaeCaulerpa serrulata (macroalga)2010 ExperimentsHigh pCO26218.020.660.440.0200.06000.005020334.80.022215332072427.780.12818222193162115302.80.701.80.50157.8123.30720.64718.221936.46112.241.752.69
S5Fleshy MacroalgaeCaulerpa serrulata (macroalga)2011 ExperimentsAmbient air513.760.590.300.0500.000020435.20.042128221899447.990.08443109172359161203.90.502.50.30158.0113.02403.50402.151725.52160.472.493.83
S5Fleshy MacroalgaeCaulerpa serrulata (macroalga)2011 ExperimentsHigh pCO2413.191.920.230.0800.00700.007020435.20.102125312023537.660.16119736218907394332.20.801.50.50157.7029.25906.61903.571906.5687.191.352.08
S5Fleshy MacroalgaeDictyota bartayresiana (macroalga)2011 ExperimentsAmbient air5123.433.240.280.0300.00040.000420435.10.052107381821518.120.032963316165719594.70.203.00.10158.139.39290.79289.821616.58195.043.034.66
S5Fleshy MacroalgaeDictyota bartayresiana (macroalga)2011 ExperimentsHigh pCO25132.865.130.270.0300.000020335.20.022128341903407.990.0643162173150159183.80.402.50.30158.0013.31412.67411.281731.66158.022.453.77
S5Fleshy MacroalgaeHypnea pannosa (macroalga)2011 ExperimentsAmbient air5135.016.400.250.0200.01000.008020335.20.1021781816771008.420.15157761320168342718.21.705.31.10158.443.75116.21115.821338.15335.105.208.00
S5Fleshy MacroalgaeHypnea pannosa (macroalga)2011 ExperimentsHigh pCO24129.001.410.250.0400.02000.009020435.10.0321593717311358.240.295204181420218294987.02.304.61.50158.355.04156.26155.741438.55287.414.466.87
S5Upright calcareous algaeDichotomaria marginata (macroalga)2011 ExperimentsAmbient air5112.563.330.260.0300.00090.000720435.10.03197410515931518.300.10186641341173246265.90.603.80.40158.315.07157.11156.591339.92248.003.855.92
S5Upright calcareous algaeDichotomaria marginata (macroalga)2011 ExperimentsHigh pCO25115.481.340.250.0200.00300.002020435.10.04173510013851538.300.14181771165178214335.10.803.30.50158.314.40136.20135.751164.52216.083.365.16
S5Upright calcareous algaeGalaxaura rugosa (macroalga)2010 ExperimentsAmbient air6212.950.560.230.0050.02000.005020334.70.012148391977547.880.0658986183161127133.00.302.00.20157.8918.46570.76568.851831.96126.581.973.03
S5Upright calcareous algaeGalaxaura rugosa (macroalga)2010 ExperimentsHigh pCO26217.000.820.250.0100.02000.003020334.80.04251414324851137.460.172215899234210971221.70.501.10.30157.4861.221893.441887.102360.3163.470.991.52
S5Upright calcareous algaeHalimeda opuntia (macroalga)2009 ExperimentsAmbient air4315.170.240.380.0080.04000.003020334.80.10222110199447.990.02440171817416353.90.102.50.10158.0014.15437.76436.291817.14162.712.533.90
S5Upright calcareous algaeHalimeda opuntia (macroalga)2009 ExperimentsHigh pCO24312.720.880.350.0100.04000.005020334.80.1022365214097.670.031014752019118852.10.101.40.10157.6832.661009.961006.582020.1887.161.362.09
S5Upright calcareous algaeHalimeda opuntia (macroalga)2011 ExperimentsAmbient air515.321.000.470.0500.00200.002020435.10.1059568596537.220.241116470546511370.30.200.20.10157.2325.48789.21786.57561.848.680.130.21
S5Upright calcareous algaeHalimeda opuntia (macroalga)2011 ExperimentsHigh pCO2417.091.660.380.0600.00800.006020435.00.038181318701517.020.142178816791132820.20.050.10.03156.9767.102077.592070.64796.296.610.100.16
S5Upright calcareous algaeHalimeda taenicola (macroalga)2009 ExperimentsAmbient air4310.710.970.390.0200.03000.002020334.80.10222110199447.990.02440171817416353.90.102.50.10158.0014.15437.76436.291817.14162.712.533.90
S5Upright calcareous algaeHalimeda taenicola (macroalga)2009 ExperimentsHigh pCO24310.990.960.390.0200.03000.004020334.80.1022365214097.670.031014752019118852.10.101.40.10157.6832.661009.961006.582020.1887.161.362.09
S5Upright calcareous algaeHalimeda taenicola (macroalga)2010 ExperimentsAmbient air6211.751.600.470.0400.04000.010020334.80.0315638515071047.560.251330815140510259221.40.500.90.30157.5928.41878.55875.601428.4950.100.781.20
S5Upright calcareous algaeHalimeda taenicola (macroalga)2010 ExperimentsHigh pCO26211.190.770.370.0200.08000.010020334.80.041759911733827.450.041365721646784461.00.100.70.10157.4743.591348.121343.601646.0643.350.671.04
S5Crustose coralline algaeLithophyllum sp. (macroalga)2009 ExperimentsAmbient air434.020.430.260.0100.000020334.80.10222110199447.990.02440171817416353.90.102.50.10158.0014.15437.76436.291817.14162.712.533.90
S5Crustose coralline algaeLithophyllum sp. (macroalga)2009 ExperimentsHigh pCO2437.221.460.260.0300.000020334.80.1022365214097.670.031014752019118852.10.101.40.10157.6832.661009.961006.582020.1887.161.362.09
S5Crustose coralline algaeLithophyllum sp. (macroalga)2011 ExperimentsAmbient air5115.151.320.170.0300.00100.001020435.00.011995501798387.950.024331316472913793.30.202.10.10157.9713.87429.35427.911647.25136.882.133.27
S5Crustose coralline algaeLithophyllum sp. (macroalga)2011 ExperimentsHigh pCO25115.853.090.150.0100.000020435.20.042104382021227.630.08110822819071979121.90.301.20.20157.6533.271031.101027.651910.7377.001.191.84