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Gibbin, Emma M; Putnam, H M; Davy, Simon K; Gates, Ruth D (2014): Adaptation of a globally important coccolithophore to ocean warming and acidification [dataset]. PANGAEA, https://doi.org/10.1594/PANGAEA.837880, Supplement to: Gibbin, EM et al. (2014): Intracellular pH and its response to CO2-driven seawater acidification in symbiotic versus non-symbiotic coral cells. Journal of Experimental Biology, 217(11), 1963-1969, https://doi.org/10.1242/jeb.099549

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Abstract:
Regulating intracellular pH (pHi) is critical for optimising the metabolic activity of corals, yet mechanisms involved in pH regulation and the buffering capacity within coral cells are not well understood. Our study investigated how the presence of symbiotic dinoflagellates affects the response of pHi to pCO2-driven seawater acidification in cells isolated from Pocillopora damicornis. Using the fluorescent dye BCECF-AM, in conjunction with confocal microscopy, we simultaneously characterised the response of pHi in host coral cells and their dinoflagellate symbionts, in symbiotic and non-symbiotic states under saturating light, with and without the photosynthetic inhibitor DCMU. Each treatment was run under control (pH 7.8) and CO2 acidified seawater conditions (decreasing pH from 7.8 - 6.8). After two hours of CO2 addition, by which time the external pH (pHe) had declined to 6.8, the dinoflagellate symbionts had increased their pHi by 0.5 pH units above control levels. In contrast, in both symbiotic and non-symbiotic host coral cells, 15 min of CO2 addition (0.2 pH unit drop in pHe) led to cytoplasmic acidosis equivalent to 0.4 pH units. Despite further seawater acidification over the duration of the experiment, the pHi of non-symbiotic coral cells did not change, though in host cells containing a symbiont cell the pHi recovered to control levels. This recovery was negated when cells were incubated with DCMU. Our results reveal that photosynthetic activity of the endosymbiont is tightly coupled with the ability of the host cell to recover from cellular acidosis after exposure to high CO2 / low pH.
Keyword(s):
Acid-base regulation; Animalia; Benthic animals; Benthos; Cnidaria; Coast and continental shelf; Containers and aquaria (20-1000 L or < 1 m**2); Laboratory experiment; North Pacific; Pocillopora damicornis; Single species; Tropical
Further details:
Lavigne, Héloïse; Epitalon, Jean-Marie; Gattuso, Jean-Pierre (2014): seacarb: seawater carbonate chemistry with R. R package version 3.0. https://cran.r-project.org/package=seacarb
Comment:
In order to allow full comparability with other ocean acidification data sets, the R package seacarb (Lavigne et al, 2014) was used to compute a complete and consistent set of carbonate system variables, as described by Nisumaa et al. (2010). In this dataset the original values were archived in addition with the recalculated parameters (see related PI). The date of carbonate chemistry calculation is 2014-11-04.
Parameter(s):
#NameShort NameUnitPrincipal InvestigatorMethod/DeviceComment
1SpeciesSpeciesGates, Ruth D
2FigureFigGates, Ruth D
3TreatmentTreatGates, Ruth D
4Time in minutesTimeminGates, Ruth D
5ReplicateReplGates, Ruth D
6pH, extracellularpHeGates, Ruth DNBS scale
7pH changeD pHGates, Ruth Dhost intact symbiosis, NBS scale, relative change in pHi after acidification
8pH changeD pHGates, Ruth Dalga intact symbiosis, NBS scale, relative change in pHi after acidification
9pH changeD pHGates, Ruth Dnon-symbiotic host cell, NBS scale, relative change in pHi after acidification
10pH changeD pHGates, Ruth Disolated alga, NBS scale, relative change in pHi after acidification
11pH, intracellularpH inGates, Ruth Dhost intact symbiosis, NBS scale
12pH, intracellularpH inGates, Ruth Dalga intact symbiosis, NBS scale
13pH, intracellularpH inGates, Ruth Dnon-symbiotic host cell, NBS scale
14pH, intracellularpH inGates, Ruth Disolated alga, NBS scale
15SalinitySalGates, Ruth D
16Salinity, standard errorSal std e±Gates, Ruth D
17pHpHGates, Ruth DNBS scale
18pH, standard errorpH std e±Gates, Ruth DNBS scale
19Alkalinity, totalATµmol/kgGates, Ruth D
20Alkalinity, total, standard errorAT std e±Gates, Ruth D
21Temperature, waterTemp°CGates, Ruth D
22Temperature, water, standard errorT std e±Gates, Ruth D
23Carbonate system computation flagCSC flagYang, YanCalculated using seacarb after Nisumaa et al. (2010)
24pHpHYang, YanCalculated using seacarb after Nisumaa et al. (2010)total scale
25Carbon dioxideCO2µmol/kgYang, YanCalculated using seacarb after Nisumaa et al. (2010)
26Partial pressure of carbon dioxide (water) at sea surface temperature (wet air)pCO2water_SST_wetµatmYang, YanCalculated using seacarb after Nisumaa et al. (2010)
27Fugacity of carbon dioxide (water) at sea surface temperature (wet air)fCO2water_SST_wetµatmYang, YanCalculated using seacarb after Nisumaa et al. (2010)
28Bicarbonate ion[HCO3]-µmol/kgYang, YanCalculated using seacarb after Nisumaa et al. (2010)
29Carbonate ion[CO3]2-µmol/kgYang, YanCalculated using seacarb after Nisumaa et al. (2010)
30Carbon, inorganic, dissolvedDICµmol/kgYang, YanCalculated using seacarb after Nisumaa et al. (2010)
31Aragonite saturation stateOmega ArgYang, YanCalculated using seacarb after Nisumaa et al. (2010)
32Calcite saturation stateOmega CalYang, YanCalculated using seacarb after Nisumaa et al. (2010)
Status:
Curation Level: Enhanced curation (CurationLevelC)
Size:
3840 data points

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