Not logged in
PANGAEA.
Data Publisher for Earth & Environmental Science

Fitzer, Susan C; Phoenix, Vernon R; Cusack, Maggie; Kamenos, N A (2014): Ocean acidification impacts mussel control on biomineralisation [dataset]. PANGAEA, https://doi.org/10.1594/PANGAEA.837675, Supplement to: Fitzer, SC et al. (2014): Ocean acidification impacts mussel control on biomineralisation. Scientific Reports, 4, 6218, https://doi.org/10.1038/srep06218

Always quote citation above when using data! You can download the citation in several formats below.

RIS CitationBibTeX Citation

Abstract:
Ocean acidification is altering the oceanic carbonate saturation state and threatening the survival of marine calcifying organisms. Production of their calcium carbonate exoskeletons is dependent not only on the environmental seawater carbonate chemistry but also the ability to produce biominerals through proteins. We present shell growth and structural responses by the economically important marine calcifier Mytilus edulis to ocean acidification scenarios (380, 550, 750, 1000 µatm pCO2). After six months of incubation at 750 µatm pCO2, reduced carbonic anhydrase protein activity and shell growth occurs in M. edulis. Beyond that, at 1000 µatm pCO2, biomineralisation continued but with compensated metabolism of proteins and increased calcite growth. Mussel growth occurs at a cost to the structural integrity of the shell due to structural disorientation of calcite crystals. This loss of structural integrity could impact mussel shell strength and reduce protection from predators and changing environments.
Keyword(s):
Animalia; Benthic animals; Benthos; Bottles or small containers/Aquaria (<20 L); Coast and continental shelf; Growth/Morphology; Laboratory experiment; Mollusca; Mytilus edulis; North Atlantic; Other metabolic rates; Single species; Temperate
Further details:
Lavigne, Héloïse; Epitalon, Jean-Marie; Gattuso, Jean-Pierre (2014): seacarb: seawater carbonate chemistry with R. R package version 3.0. https://cran.r-project.org/package=seacarb
Comment:
In order to allow full comparability with other ocean acidification data sets, the R package seacarb (Lavigne et al, 2014) was used to compute a complete and consistent set of carbonate system variables, as described by Nisumaa et al. (2010). In this dataset the original values were archived in addition with the recalculated parameters (see related PI). The date of carbonate chemistry calculation is 2014-10-30.
Parameter(s):
#NameShort NameUnitPrincipal InvestigatorMethod/DeviceComment
SpeciesSpeciesFitzer, Susan C
Image number/nameImage no/nameFitzer, Susan Cshell
Sample IDSample IDFitzer, Susan Cshell
Partial pressure of carbon dioxide (water) at sea surface temperature (wet air)pCO2water_SST_wetµatmFitzer, Susan Ctreatment
Temperature, waterTemp°CFitzer, Susan Ctreatment
Growth rateµmm/monthFitzer, Susan Cshell
Growth rateµmm/monthFitzer, Susan Ccalcite
Growth rateµmm/monthFitzer, Susan Caragonite
DateDateFitzer, Susan Canalysed
10 Sample IDSample IDFitzer, Susan Ctest
11 Carbonic anhydrase activityCA activityEU/mlFitzer, Susan CeExtrapallial fluid
12 Wet massWet mgFitzer, Susan Cmantle tissue
13 Carbonic anhydrase activity, per tissue weightCA actEU/mgFitzer, Susan Cmantle tissue
14 SalinitySalFitzer, Susan C
15 Salinity, standard deviationSal std dev±Fitzer, Susan C
16 Oxygen saturationO2 sat%Fitzer, Susan C
17 Oxygen, standard deviationO2 std dev±Fitzer, Susan C
18 Temperature, waterTemp°CFitzer, Susan C
19 Temperature, water, standard deviationTemp std dev±Fitzer, Susan C
20 pHpHFitzer, Susan CCalculated using CO2SYStotal scale
21 Partial pressure of carbon dioxide (water) at sea surface temperature (wet air)pCO2water_SST_wetµatmFitzer, Susan C
22 Partial pressure of carbon dioxide, standard deviationpCO2 std dev±Fitzer, Susan C
23 Alkalinity, totalATµmol/kgFitzer, Susan CPotentiometric titration
24 Alkalinity, total, standard deviationAT std dev±Fitzer, Susan CPotentiometric titration
25 Bicarbonate ion[HCO3]-µmol/kgFitzer, Susan CCalculated using CO2SYS
26 Carbonate ion[CO3]2-µmol/kgFitzer, Susan CCalculated using CO2SYS
27 Calcite saturation stateOmega CalFitzer, Susan CCalculated using CO2SYS
28 Aragonite saturation stateOmega ArgFitzer, Susan CCalculated using CO2SYS
29 Carbonate system computation flagCSC flagYang, YanCalculated using seacarb after Nisumaa et al. (2010)
30 pHpHYang, YanCalculated using seacarb after Nisumaa et al. (2010)total scale
31 Carbon dioxideCO2µmol/kgYang, YanCalculated using seacarb after Nisumaa et al. (2010)
32 Fugacity of carbon dioxide (water) at sea surface temperature (wet air)fCO2water_SST_wetµatmYang, YanCalculated using seacarb after Nisumaa et al. (2010)
33 Bicarbonate ion[HCO3]-µmol/kgYang, YanCalculated using seacarb after Nisumaa et al. (2010)
34 Carbonate ion[CO3]2-µmol/kgYang, YanCalculated using seacarb after Nisumaa et al. (2010)
35 Carbon, inorganic, dissolvedDICµmol/kgYang, YanCalculated using seacarb after Nisumaa et al. (2010)
36 Aragonite saturation stateOmega ArgYang, YanCalculated using seacarb after Nisumaa et al. (2010)
37 Calcite saturation stateOmega CalYang, YanCalculated using seacarb after Nisumaa et al. (2010)
Status:
Curation Level: Enhanced curation (CurationLevelC)
Size:
2516 data points

Data

Download dataset as tab-delimited text — use the following character encoding:


Species

Image no/name
(shell)

Sample ID
(shell)

pCO2water_SST_wet [µatm]
(treatment)

Temp [°C]
(treatment)

µ [mm/month]
(shell)

µ [mm/month]
(calcite)

µ [mm/month]
(aragonite)

Date
(analysed)
10 
Sample ID
(test)
11 
CA activity [EU/ml]
(eExtrapallial fluid)
12 
Wet m [g]
(mantle tissue)
13 
CA act [EU/mg]
(mantle tissue)
14 
Sal
15 
Sal std dev [±]
16 
O2 sat [%]
17 
O2 std dev [±]
18 
Temp [°C]
19 
Temp std dev [±]
20 
pH
(total scale, Calculated using...)
21 
pCO2water_SST_wet [µatm]
22 
pCO2 std dev [±]
23 
AT [µmol/kg]
(Potentiometric titration)
24 
AT std dev [±]
(Potentiometric titration)
25 
[HCO3]- [µmol/kg]
(Calculated using CO2SYS)
26 
[CO3]2- [µmol/kg]
(Calculated using CO2SYS)
27 
Omega Cal
(Calculated using CO2SYS)
28 
Omega Arg
(Calculated using CO2SYS)
29 
CSC flag
(Calculated using seacarb afte...)
30 
pH
(total scale, Calculated using...)
31 
CO2 [µmol/kg]
(Calculated using seacarb afte...)
32 
fCO2water_SST_wet [µatm]
(Calculated using seacarb afte...)
33 
[HCO3]- [µmol/kg]
(Calculated using seacarb afte...)
34 
[CO3]2- [µmol/kg]
(Calculated using seacarb afte...)
35 
DIC [µmol/kg]
(Calculated using seacarb afte...)
36 
Omega Arg
(Calculated using seacarb afte...)
37 
Omega Cal
(Calculated using seacarb afte...)
Mytilus edulis (molllusk)66380101.620.260.79331.4961.89.400.367.73761063529590120.290.18247.5516.96374.56589.8611.90618.720.180.29
Mytilus edulis (molllusk)147380100.810.300.40331.4961.89.400.367.73761063529590120.290.18247.5516.96374.56589.8611.90618.720.180.29
Mytilus edulis (molllusk)235380100.660.310.25331.4961.89.400.367.73761063529590120.290.18247.5516.96374.56589.8611.90618.720.180.29
Mytilus edulis (molllusk)248380101.350.250.35331.4961.89.400.367.73761063529590120.290.18247.5516.96374.56589.8611.90618.720.180.29
Mytilus edulis (molllusk)93380121.620.310.14361.5982.411.580.697.73761070379642710.390.25247.5915.52374.60641.8316.58673.940.250.39
Mytilus edulis (molllusk)164380121.190.270.90361.5982.411.580.697.73761070379642710.390.25247.5915.52374.60641.8316.58673.940.250.39
Mytilus edulis (molllusk)262380121.890.240.27361.5982.411.580.697.73761070379642710.390.25247.5915.52374.60641.8316.58673.940.250.39
Mytilus edulis (molllusk)281380121.030.310.36361.5982.411.580.697.73761070379642710.390.25247.5915.52374.60641.8316.58673.940.250.39
Mytilus edulis (molllusk)1510550100.780.450.13331.6992.210.010.567.755463971186909200.470.30247.5724.49551.90908.7919.72953.000.300.48
Mytilus edulis (molllusk)199550101.000.270.19331.6992.210.010.567.755463971186909200.470.30247.5724.49551.90908.7919.72953.000.300.48
Mytilus edulis (molllusk)2011550100.860.250.22331.6992.210.010.567.755463971186909200.470.30247.5724.49551.90908.7919.72953.000.300.48
Mytilus edulis (molllusk)2212550100.320.240.21331.6992.210.010.567.755463971186909200.470.30247.5724.49551.90908.7919.72953.000.300.48
Mytilus edulis (molllusk)126750101.050.250.27284.1994.810.280.347.5769427545572680.210.13247.3434.67766.09726.428.29769.380.130.21
Mytilus edulis (molllusk)228750100.370.260.33284.1994.810.280.347.5769427545572680.210.13247.3434.67766.09726.428.29769.380.130.21
Mytilus edulis (molllusk)327750101.160.280.22284.1994.810.280.347.5769427545572680.210.13247.3434.67766.09726.428.29769.380.130.21
Mytilus edulis (molllusk)425750100.490.230.24284.1994.810.280.347.5769427545572680.210.13247.3434.67766.09726.428.29769.380.130.21
Mytilus edulis (molllusk)717750121.380.200.66373.8982.612.340.437.4769426814264990.210.13247.2830.81766.16648.338.75687.890.130.21
Mytilus edulis (molllusk)818750121.160.320.53373.8982.612.340.437.4769426814264990.210.13247.2830.81766.16648.338.75687.890.130.21
Mytilus edulis (molllusk)1219750120.710.290.24373.8982.612.340.437.4769426814264990.210.13247.2830.81766.16648.338.75687.890.130.21
Mytilus edulis (molllusk)2120750120.900.490.17373.8982.612.340.437.4769426814264990.210.13247.2830.81766.16648.338.75687.890.130.21
Mytilus edulis (molllusk)5241000100.870.410.27344.6992.010.230.407.3113332698667860.130.08247.1349.441128.71677.995.54732.960.080.13
Mytilus edulis (molllusk)10231000100.830.340.14344.6992.010.230.407.3113332698667860.130.08247.1349.441128.71677.995.54732.960.080.13
Mytilus edulis (molllusk)11221000101.510.410.14344.6992.010.230.407.3113332698667860.130.08247.1349.441128.71677.995.54732.960.080.13
Mytilus edulis (molllusk)13211000101.690.320.38344.6992.010.230.407.3113332698667860.130.08247.1349.441128.71677.995.54732.960.080.13
Mytilus edulis (molllusk)17151000120.950.400.19372.1982.012.040.357.21133326422862150.130.08247.1045.831128.81621.425.38672.640.080.13
Mytilus edulis (molllusk)18161000120.730.380.36372.1982.012.040.357.21133326422862150.130.08247.1045.831128.81621.425.38672.640.080.13
Mytilus edulis (molllusk)25131000120.490.220.13372.1982.012.040.357.21133326422862150.130.08247.1045.831128.81621.425.38672.640.080.13
Mytilus edulis (molllusk)27141000120.870.410.21372.1982.012.040.357.21133326422862150.130.08247.1045.831128.81621.425.38672.640.080.13
Mytilus edulis (molllusk)380102013-10-1064.285714286331.4961.89.400.367.73761063529590120.290.18247.5516.96374.56589.8611.90618.720.180.29
Mytilus edulis (molllusk)380102013-10-0722.860000000331.4961.89.400.367.73761063529590120.290.18247.5516.96374.56589.8611.90618.720.180.29
Mytilus edulis (molllusk)380102013-10-07424.060000000331.4961.89.400.367.73761063529590120.290.18247.5516.96374.56589.8611.90618.720.180.29
Mytilus edulis (molllusk)380102013-10-07107.140000000331.4961.89.400.367.73761063529590120.290.18247.5516.96374.56589.8611.90618.720.180.29
Mytilus edulis (molllusk)380122013-10-1564.571428571361.5982.411.580.697.73761070379642710.390.25247.5915.52374.60641.8316.58673.940.250.39
Mytilus edulis (molllusk)380122013-10-15100.000000000361.5982.411.580.697.73761070379642710.390.25247.5915.52374.60641.8316.58673.940.250.39
Mytilus edulis (molllusk)380122013-10-1020.000000000361.5982.411.580.697.73761070379642710.390.25247.5915.52374.60641.8316.58673.940.250.39
Mytilus edulis (molllusk)380122013-10-1040.000000000361.5982.411.580.697.73761070379642710.390.25247.5915.52374.60641.8316.58673.940.250.39
Mytilus edulis (molllusk)550102013-10-108-1.970443350331.6992.210.010.567.755463971186909200.470.30247.5724.49551.90908.7919.72953.000.300.48
Mytilus edulis (molllusk)550102013-10-10108.791208791331.6992.210.010.567.755463971186909200.470.30247.5724.49551.90908.7919.72953.000.300.48
Mytilus edulis (molllusk)550102013-10-07630.770000000331.6992.210.010.567.755463971186909200.470.30247.5724.49551.90908.7919.72953.000.300.48
Mytilus edulis (molllusk)550102013-10-078-8.570000000331.6992.210.010.567.755463971186909200.470.30247.5724.49551.90908.7919.72953.000.300.48
Mytilus edulis (molllusk)750102013-10-1523.986710963284.1994.810.280.347.5769427545572680.210.13247.3434.67766.09726.428.29769.380.130.21
Mytilus edulis (molllusk)750102013-10-1482.597402597284.1994.810.280.347.5769427545572680.210.13247.3434.67766.09726.428.29769.380.130.21
Mytilus edulis (molllusk)750102013-10-14107.792207792284.1994.810.280.347.5769427545572680.210.13247.3434.67766.09726.428.29769.380.130.21
Mytilus edulis (molllusk)750102013-10-0962.380952381284.1994.810.280.347.5769427545572680.210.13247.3434.67766.09726.428.29769.380.130.21
Mytilus edulis (molllusk)750122013-10-15413.533834590373.8982.612.340.437.4769426814264990.210.13247.2830.81766.16648.338.75687.890.130.21
Mytilus edulis (molllusk)750122013-10-14410.000000000373.8982.612.340.437.4769426814264990.210.13247.2830.81766.16648.338.75687.890.130.21
Mytilus edulis (molllusk)750122013-10-09214.285714290373.8982.612.340.437.4769426814264990.210.13247.2830.81766.16648.338.75687.890.130.21
Mytilus edulis (molllusk)750122013-10-094-1.785714286373.8982.612.340.437.4769426814264990.210.13247.2830.81766.16648.338.75687.890.130.21
Mytilus edulis (molllusk)1000102013-10-1422.857142857344.6992.010.230.407.3113332698667860.130.08247.1349.441128.71677.995.54732.960.080.13
Mytilus edulis (molllusk)1000102013-10-1461.904761905344.6992.010.230.407.3113332698667860.130.08247.1349.441128.71677.995.54732.960.080.13
Mytilus edulis (molllusk)1000102013-10-082-1.904761905344.6992.010.230.407.3113332698667860.130.08247.1349.441128.71677.995.54732.960.080.13
Mytilus edulis (molllusk)1000102013-10-0866.015037594344.6992.010.230.407.3113332698667860.130.08247.1349.441128.71677.995.54732.960.080.13
Mytilus edulis (molllusk)1000122013-10-1588.791208791372.1982.012.040.357.21133326422862150.130.08247.1045.831128.81621.425.38672.640.080.13
Mytilus edulis (molllusk)1000122013-10-10123.174603175372.1982.012.040.357.21133326422862150.130.08247.1045.831128.81621.425.38672.640.080.13
Mytilus edulis (molllusk)1000122013-10-084-3.361344538372.1982.012.040.357.21133326422862150.130.08247.1045.831128.81621.425.38672.640.080.13
Mytilus edulis (molllusk)3801060.1105-0.030331.4961.89.400.367.73761063529590120.290.18247.5516.96374.56589.8611.90618.720.180.29
Mytilus edulis (molllusk)3801020.05180.840331.4961.89.400.367.73761063529590120.290.18247.5516.96374.56589.8611.90618.720.180.29
Mytilus edulis (molllusk)3801040.11350.108331.4961.89.400.367.73761063529590120.290.18247.5516.96374.56589.8611.90618.720.180.29
Mytilus edulis (molllusk)38010100.01592.960331.4961.89.400.367.73761063529590120.290.18247.5516.96374.56589.8611.90618.720.180.29
Mytilus edulis (molllusk)3801260.1516-0.219361.5982.411.580.697.73761070379642710.390.25247.5915.52374.60641.8316.58673.940.250.39
Mytilus edulis (molllusk)38012100.12840.414361.5982.411.580.697.73761070379642710.390.25247.5915.52374.60641.8316.58673.940.250.39
Mytilus edulis (molllusk)3801220.14490.217361.5982.411.580.697.73761070379642710.390.25247.5915.52374.60641.8316.58673.940.250.39
Mytilus edulis (molllusk)3801240.17540.081361.5982.411.580.697.73761070379642710.390.25247.5915.52374.60641.8316.58673.940.250.39
Mytilus edulis (molllusk)5501080.04880.323331.6992.210.010.567.755463971186909200.470.30247.5724.49551.90908.7919.72953.000.300.48
Mytilus edulis (molllusk)55010100.03461.143331.6992.210.010.567.755463971186909200.470.30247.5724.49551.90908.7919.72953.000.300.48
Mytilus edulis (molllusk)5501060.0951-0.060331.6992.210.010.567.755463971186909200.470.30247.5724.49551.90908.7919.72953.000.300.48
Mytilus edulis (molllusk)5501080.07630.200331.6992.210.010.567.755463971186909200.470.30247.5724.49551.90908.7919.72953.000.300.48
Mytilus edulis (molllusk)7501020.14290.074284.1994.810.280.347.5769427545572680.210.13247.3434.67766.09726.428.29769.380.130.21
Mytilus edulis (molllusk)7501080.1340-0.109284.1994.810.280.347.5769427545572680.210.13247.3434.67766.09726.428.29769.380.130.21
Mytilus edulis (molllusk)75010100.04740.336284.1994.810.280.347.5769427545572680.210.13247.3434.67766.09726.428.29769.380.130.21
Mytilus edulis (molllusk)7501060.13490.212284.1994.810.280.347.5769427545572680.210.13247.3434.67766.09726.428.29769.380.130.21
Mytilus edulis (molllusk)7501240.22080.144373.8982.612.340.437.4769426814264990.210.13247.2830.81766.16648.338.75687.890.130.21
Mytilus edulis (molllusk)7501240.07750.233373.8982.612.340.437.4769426814264990.210.13247.2830.81766.16648.338.75687.890.130.21
Mytilus edulis (molllusk)7501220.1287-0.127373.8982.612.340.437.4769426814264990.210.13247.2830.81766.16648.338.75687.890.130.21
Mytilus edulis (molllusk)7501240.14270.032373.8982.612.340.437.4769426814264990.210.13247.2830.81766.16648.338.75687.890.130.21
Mytilus edulis (molllusk)10001020.19690.224344.6992.010.230.407.3113332698667860.130.08247.1349.441128.71677.995.54732.960.080.13
Mytilus edulis (molllusk)10001060.02191.472344.6992.010.230.407.3113332698667860.130.08247.1349.441128.71677.995.54732.960.080.13
Mytilus edulis (molllusk)10001020.05590.175344.6992.010.230.407.3113332698667860.130.08247.1349.441128.71677.995.54732.960.080.13
Mytilus edulis (molllusk)10001060.0909-0.039344.6992.010.230.407.3113332698667860.130.08247.1349.441128.71677.995.54732.960.080.13
Mytilus edulis (molllusk)10001280.12810.320372.1982.012.040.357.21133326422862150.130.08247.1045.831128.81621.425.38672.640.080.13
Mytilus edulis (molllusk)100012120.04110.363372.1982.012.040.357.21133326422862150.130.08247.1045.831128.81621.425.38672.640.080.13
Mytilus edulis (molllusk)10001240.03180.317372.1982.012.040.357.21133326422862150.130.08247.1045.831128.81621.425.38672.640.080.13