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Johnson, Maggie Dorothy; Moriarty, Vincent; Carpenter, Robert C (2014): Acclimatization of the crustose coralline alga Porolithon onkodes to variable pCO2 [dataset]. PANGAEA, https://doi.org/10.1594/PANGAEA.835310, Supplement to: Johnson, MD et al. (2014): Acclimatization of the Crustose Coralline Alga Porolithon onkodes to Variable pCO2. PLoS ONE, 9(2), e87678, https://doi.org/10.1371/journal.pone.0087678

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Abstract:
Ocean acidification (OA) has important implications for the persistence of coral reef ecosystems, due to potentially negative effects on biomineralization. Many coral reefs are dynamic with respect to carbonate chemistry, and experience fluctuations in pCO2 that exceed OA projections for the near future. To understand the influence of dynamic pCO2 on an important reef calcifier, we tested the response of the crustose coralline alga Porolithon onkodes to oscillating pCO2. Individuals were exposed to ambient (400 µatm), high (660 µatm), or variable pCO2 (oscillating between 400/660 µatm) treatments for 14 days. To explore the potential for coralline acclimatization, we collected individuals from low and high pCO2 variability sites (upstream and downstream respectively) on a back reef characterized by unidirectional water flow in Moorea, French Polynesia. We quantified the effects of treatment on algal calcification by measuring the change in buoyant weight, and on algal metabolism by conducting sealed incubations to measure rates of photosynthesis and respiration. Net photosynthesis was higher in the ambient treatment than the variable treatment, regardless of habitat origin, and there was no effect on respiration or gross photosynthesis. Exposure to high pCO2 decreased P. onkodes calcification by >70%, regardless of the original habitat. In the variable treatment, corallines from the high variability habitat calcified 42% more than corallines from the low variability habitat. The significance of the original habitat for the coralline calcification response to variable, high pCO2 indicates that individuals existing in dynamic pCO2 habitats may be acclimatized to OA within the scope of in situ variability. These results highlight the importance of accounting for natural pCO2 variability in OA manipulations, and provide insight into the potential for plasticity in habitat and species-specific responses to changing ocean chemistry.
Keyword(s):
Benthos; Calcification/Dissolution; Coast and continental shelf; Containers and aquaria (20-1000 L or < 1 m**2); Laboratory experiment; Macroalgae; Plantae; Porolithon onkodes; Primary production/Photosynthesis; Respiration; Rhodophyta; Single species; South Pacific; Tropical
Further details:
Lavigne, Héloïse; Epitalon, Jean-Marie; Gattuso, Jean-Pierre (2014): seacarb: seawater carbonate chemistry with R. R package version 3.0. https://cran.r-project.org/package=seacarb
Comment:
In order to allow full comparability with other ocean acidification data sets, the R package seacarb (Lavigne et al, 2014) was used to compute a complete and consistent set of carbonate system variables, as described by Nisumaa et al. (2010). In this dataset the original values were archived in addition with the recalculated parameters (see related PI). The date of carbonate chemistry calculation is 2014-08-27.
Parameter(s):
#NameShort NameUnitPrincipal InvestigatorMethod/DeviceComment
SpeciesSpeciesJohnson, Maggie Dorothy
TreatmentTreatJohnson, Maggie DorothypCO2
TreatmentTreatJohnson, Maggie Dorothyorigin
Calcification rate of calcium carbonateCalc rate CaCO3mg/cm2/dayJohnson, Maggie Dorothy
Calcification rate, standard errorCalc rate std e±Johnson, Maggie Dorothy
Gross photosynthesis rate, oxygenPG O2µmol/cm2/hJohnson, Maggie Dorothy
Gross photosynthesis rate, oxygen, standard errorPG O2 std e±Johnson, Maggie Dorothy
Respiration rate, oxygenResp O2µmol/cm2/hJohnson, Maggie Dorothy
Respiration rate, oxygen, standard errorResp O2 std e±Johnson, Maggie Dorothy
10 Net photosynthesis rate, oxygenPN O2µmol/cm2/hJohnson, Maggie Dorothy
11 Net photosynthesis rate, oxygen, standard errorPN O2 std e±Johnson, Maggie Dorothy
12 Temperature, waterTemp°CJohnson, Maggie Dorothy
13 Temperature, water, standard errorT std e±Johnson, Maggie Dorothy
14 SalinitySalJohnson, Maggie Dorothy
15 Salinity, standard errorSal std e±Johnson, Maggie Dorothy
16 IrradianceEµmol/m2/sJohnson, Maggie Dorothy
17 Irradiance, standard errorE std e±Johnson, Maggie Dorothy
18 pHpHJohnson, Maggie DorothySpectrophotometrictotal scale
19 pH, standard errorpH std e±Johnson, Maggie DorothySpectrophotometrictotal scale
20 Alkalinity, totalATµmol/kgJohnson, Maggie DorothyPotentiometric titration
21 Alkalinity, total, standard errorAT std e±Johnson, Maggie DorothyPotentiometric titration
22 Partial pressure of carbon dioxide (water) at sea surface temperature (wet air)pCO2water_SST_wetµatmJohnson, Maggie DorothyCalculated using CO2SYS
23 Partial pressure of carbon dioxide (water) at sea surface temperature (wet air), standard errorpCO2water_SST_wet std e±Johnson, Maggie DorothyCalculated using CO2SYS
24 Calcite saturation stateOmega CalJohnson, Maggie DorothyCalculated using CO2SYS
25 Calcite saturation state, standard errorOmega Cal std e±Johnson, Maggie DorothyCalculated using CO2SYS
26 Aragonite saturation stateOmega ArgJohnson, Maggie DorothyCalculated using CO2SYS
27 Aragonite saturation state, standard errorOmega Arg std e±Johnson, Maggie DorothyCalculated using CO2SYS
28 Temperature, waterTemp°CJohnson, Maggie Dorothyalternated
29 Temperature, water, standard errorT std e±Johnson, Maggie Dorothyalternated
30 SalinitySalJohnson, Maggie Dorothyalternated
31 Salinity, standard errorSal std e±Johnson, Maggie Dorothyalternated
32 IrradianceEµmol/m2/sJohnson, Maggie Dorothyalternated
33 Irradiance, standard errorE std e±Johnson, Maggie Dorothyalternated
34 pHpHJohnson, Maggie DorothySpectrophotometricalternated, total scale
35 pH, standard errorpH std e±Johnson, Maggie DorothySpectrophotometricalternated
36 Alkalinity, totalATµmol/kgJohnson, Maggie DorothyPotentiometric titrationalternated
37 Alkalinity, total, standard errorAT std e±Johnson, Maggie DorothyPotentiometric titrationalternated
38 Partial pressure of carbon dioxide (water) at sea surface temperature (wet air)pCO2water_SST_wetµatmJohnson, Maggie DorothyCalculated using CO2SYSalternated
39 Partial pressure of carbon dioxide (water) at sea surface temperature (wet air), standard errorpCO2water_SST_wet std e±Johnson, Maggie DorothyCalculated using CO2SYSalternated
40 Calcite saturation stateOmega CalJohnson, Maggie DorothyCalculated using CO2SYSalternated
41 Calcite saturation state, standard errorOmega Cal std e±Johnson, Maggie DorothyCalculated using CO2SYSalternated
42 Aragonite saturation stateOmega ArgJohnson, Maggie DorothyCalculated using CO2SYSalternated
43 Aragonite saturation state, standard errorOmega Arg std e±Johnson, Maggie DorothyCalculated using CO2SYSalternated
44 Carbonate system computation flagCSC flagYang, YanCalculated using seacarb after Nisumaa et al. (2010)
45 Carbon dioxideCO2µmol/kgYang, YanCalculated using seacarb after Nisumaa et al. (2010)
46 Partial pressure of carbon dioxide (water) at sea surface temperature (wet air)pCO2water_SST_wetµatmYang, YanCalculated using seacarb after Nisumaa et al. (2010)
47 Fugacity of carbon dioxide (water) at sea surface temperature (wet air)fCO2water_SST_wetµatmYang, YanCalculated using seacarb after Nisumaa et al. (2010)
48 Bicarbonate ion[HCO3]-µmol/kgYang, YanCalculated using seacarb after Nisumaa et al. (2010)
49 Carbonate ion[CO3]2-µmol/kgYang, YanCalculated using seacarb after Nisumaa et al. (2010)
50 Carbon, inorganic, dissolvedDICµmol/kgYang, YanCalculated using seacarb after Nisumaa et al. (2010)
51 Aragonite saturation stateOmega ArgYang, YanCalculated using seacarb after Nisumaa et al. (2010)
52 Calcite saturation stateOmega CalYang, YanCalculated using seacarb after Nisumaa et al. (2010)
53 Carbon dioxideCO2µmol/kgYang, YanCalculated using seacarb after Nisumaa et al. (2010)alternated
54 Partial pressure of carbon dioxide (water) at sea surface temperature (wet air)pCO2water_SST_wetµatmYang, YanCalculated using seacarb after Nisumaa et al. (2010)alternated
55 Fugacity of carbon dioxide (water) at sea surface temperature (wet air)fCO2water_SST_wetµatmYang, YanCalculated using seacarb after Nisumaa et al. (2010)alternated
56 Bicarbonate ion[HCO3]-µmol/kgYang, YanCalculated using seacarb after Nisumaa et al. (2010)alternated
57 Carbonate ion[CO3]2-µmol/kgYang, YanCalculated using seacarb after Nisumaa et al. (2010)alternated
58 Carbon, inorganic, dissolvedDICµmol/kgYang, YanCalculated using seacarb after Nisumaa et al. (2010)alternated
59 Aragonite saturation stateOmega ArgYang, YanCalculated using seacarb after Nisumaa et al. (2010)alternated
60 Calcite saturation stateOmega CalYang, YanCalculated using seacarb after Nisumaa et al. (2010)alternated
Status:
Curation Level: Enhanced curation (CurationLevelC)
Size:
264 data points

Data

Download dataset as tab-delimited text — use the following character encoding:


Species

Treat
(pCO2)

Treat
(origin)

Calc rate CaCO3 [mg/cm2/day]

Calc rate std e [±]

PG O2 [µmol/cm2/h]

PG O2 std e [±]

Resp O2 [µmol/cm2/h]

Resp O2 std e [±]
10 
PN O2 [µmol/cm2/h]
11 
PN O2 std e [±]
12 
Temp [°C]
13 
T std e [±]
14 
Sal
15 
Sal std e [±]
16 
E [µmol/m2/s]
17 
E std e [±]
18 
pH
(total scale, Spectrophotometric)
19 
pH std e [±]
(total scale, Spectrophotometric)
20 
AT [µmol/kg]
(Potentiometric titration)
21 
AT std e [±]
(Potentiometric titration)
22 
pCO2water_SST_wet [µatm]
(Calculated using CO2SYS)
23 
pCO2water_SST_wet std e [±]
(Calculated using CO2SYS)
24 
Omega Cal
(Calculated using CO2SYS)
25 
Omega Cal std e [±]
(Calculated using CO2SYS)
26 
Omega Arg
(Calculated using CO2SYS)
27 
Omega Arg std e [±]
(Calculated using CO2SYS)
28 
Temp [°C]
(alternated)
29 
T std e [±]
(alternated)
30 
Sal
(alternated)
31 
Sal std e [±]
(alternated)
32 
E [µmol/m2/s]
(alternated)
33 
E std e [±]
(alternated)
34 
pH
(alternated, total scale, Spec...)
35 
pH std e [±]
(alternated, Spectrophotometric)
36 
AT [µmol/kg]
(alternated, Potentiometric ti...)
37 
AT std e [±]
(alternated, Potentiometric ti...)
38 
pCO2water_SST_wet [µatm]
(alternated, Calculated using ...)
39 
pCO2water_SST_wet std e [±]
(alternated, Calculated using ...)
40 
Omega Cal
(alternated, Calculated using ...)
41 
Omega Cal std e [±]
(alternated, Calculated using ...)
42 
Omega Arg
(alternated, Calculated using ...)
43 
Omega Arg std e [±]
(alternated, Calculated using ...)
44 
CSC flag
(Calculated using seacarb afte...)
45 
CO2 [µmol/kg]
(Calculated using seacarb afte...)
46 
pCO2water_SST_wet [µatm]
(Calculated using seacarb afte...)
47 
fCO2water_SST_wet [µatm]
(Calculated using seacarb afte...)
48 
[HCO3]- [µmol/kg]
(Calculated using seacarb afte...)
49 
[CO3]2- [µmol/kg]
(Calculated using seacarb afte...)
50 
DIC [µmol/kg]
(Calculated using seacarb afte...)
51 
Omega Arg
(Calculated using seacarb afte...)
52 
Omega Cal
(Calculated using seacarb afte...)
53 
CO2 [µmol/kg]
(alternated, Calculated using ...)
54 
pCO2water_SST_wet [µatm]
(alternated, Calculated using ...)
55 
fCO2water_SST_wet [µatm]
(alternated, Calculated using ...)
56 
[HCO3]- [µmol/kg]
(alternated, Calculated using ...)
57 
[CO3]2- [µmol/kg]
(alternated, Calculated using ...)
58 
DIC [µmol/kg]
(alternated, Calculated using ...)
59 
Omega Arg
(alternated, Calculated using ...)
60 
Omega Cal
(alternated, Calculated using ...)
Porolithon onkodes (macroalga)Ambient pCO2Upstream0.7085185190.0826968151.2578677510.1799445380.6086456860.0405763790.6492220650.16230551628.60.0235.50.02607158.0980.0042315240365.700.053.800.0488.74337.97336.951672.38261.371942.494.216.30
Porolithon onkodes (macroalga)Ambient pCO2Downstream0.6987855280.0495686700.9332567190.0776978510.4869165490.0662609500.4463401700.10211498128.60.0235.50.02607158.0980.0042315240365.700.053.800.0488.74337.97336.951672.38261.371942.494.216.30
Porolithon onkodes (macroalga)Elevated pCO2Upstream0.2026591640.1216499850.9819483730.1127410150.6897984440.0776978510.2921499290.11322676028.60.0235.50.02651177.9230.01123161667194.170.092.790.06814.42557.52555.841843.82192.592050.833.104.64
Porolithon onkodes (macroalga)Elevated pCO2Downstream0.2492704710.0774476891.0062942010.2181585790.5680693070.1405607000.4382248940.18671014128.60.0235.50.02651177.9230.01123161667194.170.092.790.06814.42557.52555.841843.82192.592050.833.104.64
Porolithon onkodes (macroalga)VariableUpstream0.4150123680.1195754860.7222595470.1926701610.6086456860.0776978510.1136138610.13547083128.70.0235.50.02668168.0270.0052329643265.520.063.680.0428.40.0235.50.02634127.8650.01423223666674.170.322.780.21810.78418.00416.751755.50233.822000.113.765.6417.04655.82653.841899.83172.382089.252.774.16
Porolithon onkodes (macroalga)VariableDownstream0.5812557390.1704447530.7141442720.1343317170.6086456860.1021149810.1054985860.07074733428.70.0235.50.02668168.0270.0052329643265.520.063.680.0428.40.0235.50.02634127.8650.01423223666674.170.322.780.21810.78418.00416.751755.50233.822000.113.765.6417.04655.82653.841899.83172.382089.252.774.16