# | Name | Short Name | Unit | Principal Investigator | Method/Device | Comment |
1 | Event label | Event | | | | |
2 | Other event | Other event | | Gazeau, Frédéric | | |
3 | Treatment | Treat | | Gazeau, Frédéric | | |
4 | Day of experiment | DOE | day | Guieu, Cecile | | |
5 | DATE/TIME | Date/Time | | | | Geocode |
6 | DEPTH, water, experiment | Depth water exp | m | | | Geocode |
7 | Temperature, water | Temp | °C | Taillandier, V | CTD | |
8 | Salinity | Sal | | Taillandier, V | CTD | |
9 | Density, sigma, in situ | Sigma in situ | kg/m3 | Taillandier, V | CTD | |
10 | Fluorometer | Fluorometer | V | Taillandier, V | CTD | |
11 | Oxygen | O2 | µmol/l | Taillandier, V | CTD with attached oxygen sensor | |
12 | Irradiance | E | µmol/m2/s | Taillandier, V | CTD | |
13 | pH | pH | | Taillandier, V | CTD | Total scale; based on a empiric relationship between pH calculated from TA and TCO2 and integrated pH from the CTD (originally on the NBS) |
14 | Carbonate system computation flag | CSC flag | | Alliouane, Samir | Calculated using seacarb | |
15 | pH | pH | | Alliouane, Samir | Calculated using seacarb | Total scale |
16 | Partial pressure of carbon dioxide (water) at sea surface temperature (wet air) | pCO2water_SST_wet | µatm | Alliouane, Samir | Calculated using seacarb | |
17 | Bicarbonate ion | [HCO3]- | µmol/kg | Alliouane, Samir | Calculated using seacarb | |
18 | Carbonate ion | [CO3]2- | µmol/kg | Alliouane, Samir | Calculated using seacarb | |
19 | Carbon, inorganic, dissolved | DIC | µmol/kg | Alliouane, Samir | AIRICA analyzer (Miranda) | |
20 | Alkalinity, total | AT | µmol/kg | Alliouane, Samir | Titration potentiometric, Metrohm | |
21 | Aragonite saturation state | Omega Arg | | Alliouane, Samir | Calculated using seacarb | |
22 | Calcite saturation state | Omega Cal | | Alliouane, Samir | Calculated using seacarb | |
23 | Ammonium | [NH4]+ | µmol/l | Sallon, Amèlie | Skalar AutoAnalyser | |
24 | Silicon | Si | µmol/l | Giani, Michele | Skalar AutoAnalyser | |
25 | Nitrogen, total, particulate | TPN | µmol/l | Giani, Michele | Element analyser CHN, Costech | |
26 | Carbon, total, particulate | TPC | µmol/l | Giani, Michele | Element analyser CHN, Costech | |
27 | Carbon, organic, particulate | POC | µmol/l | Giani, Michele | Element analyser CHN, Costech | |
28 | Phosphorus, particulate | PP | µmol/l | Giani, Michele | Colorimetric, GF/F filters, autoanalyzer (Bran Luebbe) | Total |
29 | Chlorophyll c3 | Chl c3 | µg/l | Sallon, Amèlie | High Performance Liquid Chromatography (HPLC) | |
30 | Chlorophyll c1+c2 | Chl c1+c2 | µg/l | Sallon, Amèlie | High Performance Liquid Chromatography (HPLC) | |
31 | Chlorophyllide a | Chlide a | µg/l | Sallon, Amèlie | High Performance Liquid Chromatography (HPLC) | Sum |
32 | Peridinin | Perid | µg/l | Sallon, Amèlie | High Performance Liquid Chromatography (HPLC) | |
33 | Phaeophorbide a | Phaeopho a | µg/l | Sallon, Amèlie | High Performance Liquid Chromatography (HPLC) | |
34 | 19-Butanoyloxyfucoxanthin | But-fuco | µg/l | Sallon, Amèlie | High Performance Liquid Chromatography (HPLC) | |
35 | Fucoxanthin | Fuco | µg/l | Sallon, Amèlie | High Performance Liquid Chromatography (HPLC) | |
36 | Neoxanthin | Neo | µg/l | Sallon, Amèlie | High Performance Liquid Chromatography (HPLC) | |
37 | Prasinoxanthin | Pras | µg/l | Sallon, Amèlie | High Performance Liquid Chromatography (HPLC) | |
38 | Violaxanthin | Viola | µg/l | Sallon, Amèlie | High Performance Liquid Chromatography (HPLC) | |
39 | 19-Hexanoyloxyfucoxanthin | Hex-fuco | µg/l | Sallon, Amèlie | High Performance Liquid Chromatography (HPLC) | |
40 | Diadinoxanthin | Diadino | µg/l | Sallon, Amèlie | High Performance Liquid Chromatography (HPLC) | |
41 | Alloxanthin | Allo | µg/l | Sallon, Amèlie | High Performance Liquid Chromatography (HPLC) | |
42 | Diatoxanthin | Diato | µg/l | Sallon, Amèlie | High Performance Liquid Chromatography (HPLC) | |
43 | Zeaxanthin | Zea | µg/l | Sallon, Amèlie | High Performance Liquid Chromatography (HPLC) | |
44 | Lutein | Lut | µg/l | Sallon, Amèlie | High Performance Liquid Chromatography (HPLC) | |
45 | Bacteriochlorophyll a | BChl a | µg/l | Sallon, Amèlie | High Performance Liquid Chromatography (HPLC) | |
46 | Divinyl chlorophyll b | DV chl b | µg/l | Sallon, Amèlie | High Performance Liquid Chromatography (HPLC) | |
47 | Chlorophyll b | Chl b | µg/l | Sallon, Amèlie | High Performance Liquid Chromatography (HPLC) | |
48 | Divinyl chlorophyll a | DV chl a | µg/l | Sallon, Amèlie | High Performance Liquid Chromatography (HPLC) | |
49 | Chlorophyll a | Chl a | µg/l | Sallon, Amèlie | High Performance Liquid Chromatography (HPLC) | |
50 | Chlorophyll a | Chl a | µg/l | Sallon, Amèlie | High Performance Liquid Chromatography (HPLC) | Total |
51 | Phaeophytin a | Phaeophytin a | µg/l | Sallon, Amèlie | High Performance Liquid Chromatography (HPLC) | Sum |
52 | Carotene | Carotene | µg/l | Sallon, Amèlie | High Performance Liquid Chromatography (HPLC) | Sum |
53 | Prochlorococcus | Prochlorococcus | #/ml | Pedrotti, Maria Luiza | Flow cytometry | |
54 | Synechococcus | Synechococcus | #/ml | Pedrotti, Maria Luiza | Flow cytometry | |
55 | Picoeukaryotes, autotrophic | PEuk auto | #/ml | Pedrotti, Maria Luiza | Flow cytometry | |
56 | Nanoeukaryotes | NEuk | #/ml | Pedrotti, Maria Luiza | Flow cytometry | |
57 | Bacteria | Bact | #/ml | Pitta, Paraskevi | Flow cytometry | |
58 | Bacteria, low DNA fluorescence | Bact LDNA | #/ml | Pitta, Paraskevi | Flow cytometry | |
59 | Bacteria, high DNA fluorescence | Bact HDNA | #/ml | Pitta, Paraskevi | Flow cytometry | |
60 | Viral abundance | Virus | #/ml | Pitta, Paraskevi | Flow cytometry | |
61 | Virus, low DNA fluorescence | Virus LDNA | #/ml | Pitta, Paraskevi | Flow cytometry | |
62 | Virus, medium DNA fluorescence | Virus HDNA | #/ml | Pitta, Paraskevi | Flow cytometry | |
63 | Virus, high DNA fluorescence | Virus HDNA | #/ml | Pitta, Paraskevi | Flow cytometry | |
64 | beta-glucosidase activity | MUF-bglu | µmol/l/h | Celussi, Mauro | | MUF-beta-D-glucose fluorogenic substrate |
65 | Lipase activity | Lipase activity | nmol/l/h | Celussi, Mauro | | MUF-beta-D-glucose fluorogenic substrate |
66 | Chitinase activity | Chitinase activity | nmol/l/h | Celussi, Mauro | | MUF-beta-D-glucose fluorogenic substrate |
67 | Phosphatase activity | MUF-Phos | µmol/l/h | Celussi, Mauro | | MUF-beta-D-glucose fluorogenic substrate |
68 | Leucine aminopeptidase activity | Leu aminopep | nmol/l/h | Celussi, Mauro | | MCA-leucine fluorogenic substrate |
69 | Prokaryotes | Prokaryotes | #/ml | Celussi, Mauro | Epifluorescence microscopy | Highly active |
70 | Prokaryotes | Prokaryotes | #/ml | Celussi, Mauro | Epifluorescence microscopy | Total |
71 | Net community production of oxygen | NCP O2 | µmol/l/day | Gazeau, Frédéric | Incubation (INCUB) | Incubated in situ at 4m depth in 5 x biological oxygen demand (BOD) 60ml bottles over 24h. Rate estimated using a linear regression between initial and final oxygen concentration |
72 | Net community production of oxygen, standard error | NCP O2 std e | ± | Gazeau, Frédéric | Calculated from linear regression | |
73 | Respiration rate, oxygen | Resp O2 | µmol/l/day | Gazeau, Frédéric | Incubation (INCUB) | Community; Incubated in the laboratory in the dark at in situ temperature in 5 x biological oxygen demand (BOD) 60ml bottles over 24h. Rate estimated using a linear regression between initial and final oxygen concentration |
74 | Respiration rate, oxygen, standard deviation | Resp O2 std dev | ± | Gazeau, Frédéric | Calculated from linear regression | Community |
75 | Gross community production of oxygen | GCP O2 | µmol/l/day | Gazeau, Frédéric | Calculated | Calculated as the difference between net community production and respiration |
76 | Gross community production of oxygen, standard error | GCP O2 std e | ± | Gazeau, Frédéric | Calculated using error propagation | |
77 | Bacterial production | BP | ng/l/h | Giannakourou, Antonia | Incubation (INCUB) | 3H-Leucine incorporation in triplicated bottles incubated in the laboratory in the dark at in situ temperature over 2h |
78 | Primary production of POC as determined by 14C POC production | PP 14C POC | µmol/l/day | Maugendre, Laure | | |
79 | Primary production of POC as determined by 14C POC production, standard deviation | PP 14C POC std dev | ± | Maugendre, Laure | | |
80 | Calcification rate of calcium carbonate | Calc rate CaCO3 | µmol/l/day | Maugendre, Laure | | |
81 | Calcification rate, standard deviation | Calc rate std dev | ± | Maugendre, Laure | | |
82 | Exudation as determined by 14C DOC production | Exud 14C DOC | µmol/l/day | Maugendre, Laure | | |
83 | Exudation as determined by 14C DOC production, standard deviation | Exud 14C DOC std dev | ± | Maugendre, Laure | | |
84 | Transparent exopolymer particles as Gum Xanthan equivalents per volume | TEP | µg Xeq/l | Pedrotti, Maria Luiza | | |
85 | Nitrate | [NO3]- | µmol/l | Louis, Justine | Spectrophotometric method with Liquid Waveguide Capillary Cell (LWCC) | Filtration onto 0.2 µm polycarbonate filters |
86 | Phosphate | [PO4]3- | µmol/l | Louis, Justine | Spectrophotometric method with Liquid Waveguide Capillary Cell (LWCC) | Filtration onto 0.2 µm polycarbonate filters |
87 | Iron, dissolved | Fe diss | nmol/l | Louis, Justine | FIA with chemiluminescence detection | Filtration onto 0.2 µm polycarbonate filters |
88 | Nitrogen, organic, dissolved | DON | µmol/l | Louis, Justine | UV light photo oxidation then spectrophotometric method with LWCC | Calculated as the difference between total dissolved nitrogen measured (TDN) and nitrate concentration |
89 | Phosphate, organic, dissolved | DOP | µmol/l | Louis, Justine | UV light photo oxidation then spectrophotometric method with LWCC | Calculated as the difference between total dissolved phosphorus measured (TDP) and phosphate concentration |
90 | Validation flag/comment | Flag comm | | Yang, Yan | Calculated using seacarb after Nisumaa et al. (2010) | |
91 | pH | pH | | Yang, Yan | Calculated using seacarb after Nisumaa et al. (2010) | Total scale |
92 | Carbon dioxide | CO2 | µmol/kg | Yang, Yan | Calculated using seacarb after Nisumaa et al. (2010) | |
93 | Partial pressure of carbon dioxide (water) at sea surface temperature (wet air) | pCO2water_SST_wet | µatm | Yang, Yan | Calculated using seacarb after Nisumaa et al. (2010) | |
94 | Fugacity of carbon dioxide (water) at sea surface temperature (wet air) | fCO2water_SST_wet | µatm | Yang, Yan | Calculated using seacarb after Nisumaa et al. (2010) | |
95 | Bicarbonate ion | [HCO3]- | µmol/kg | Yang, Yan | Calculated using seacarb after Nisumaa et al. (2010) | |
96 | Carbonate ion | [CO3]2- | µmol/kg | Yang, Yan | Calculated using seacarb after Nisumaa et al. (2010) | |
97 | Aragonite saturation state | Omega Arg | | Yang, Yan | Calculated using seacarb after Nisumaa et al. (2010) | |
98 | Calcite saturation state | Omega Cal | | Yang, Yan | Calculated using seacarb after Nisumaa et al. (2010) | |