Not logged in
PANGAEA.
Data Publisher for Earth & Environmental Science

Sugie, Koji; Yoshimura, T (2013): Effects of pCO2 and iron on the elemental composition and cell geometry of the marine diatom Pseudo-nitzschia pseudodelicatissima//(Bacillariophyceae) [dataset]. PANGAEA, https://doi.org/10.1594/PANGAEA.833852, Supplement to: Sugie, K; Yoshimura, T (2013): Effects of pCO2 and iron on the elemental composition and cell geometry of the marine diatom Pseudo-nitzschia pseudodelicatissima (Bacillariophyceae). Journal of Phycology, 49(3), 475-488, https://doi.org/10.1111/jpy.12054

Always quote citation above when using data! You can download the citation in several formats below.

RIS CitationBibTeX CitationShow MapGoogle Earth

Abstract:
Partial pressure of CO2 (pCO2) and iron availability in seawater show corresponding changes due to biological and anthropogenic activities. The simultaneous change in these factors precludes an understanding of their independent effects on the ecophysiology of phytoplankton. In addition, there is a lack of data regarding the interactive effects of these factors on phytoplankton cellular stoichiometry, which is a key driving factor for the biogeochemical cycling of oceanic nutrients. Here, we investigated the effects of pCO2 and iron availability on the elemental composition (C, N, P, and Si) of the diatom Pseudo-nitzschia pseudodelicatissima (Hasle) Hasle by dilute batch cultures under 4 pCO2 (~200, ~380, ~600, and ~800 µatm) and five dissolved inorganic iron (Fe'; ~5, ~10, ~20, ~50, and ~100 pmol /L) conditions. Our experimental procedure successfully overcame the problems associated with simultaneous changes in pCO2 and Fe' by independently manipulating carbonate chemistry and iron speciation, which allowed us to evaluate the individual effects of pCO2 and iron availability. We found that the C:N ratio decreased significantly only with an increase in Fe', whereas the C:P ratio increased significantly only with an increase in pCO2. Both Si:C and Si:N ratios decreased with increasing pCO2 and Fe'. Our results indicate that changes in pCO2 and iron availability could influence the biogeochemical cycling of nutrients in future oceans with high- CO2 levels, and, similarly, during the time course of phytoplankton blooms. Moreover, pCO2 and iron availability may also have affected oceanic nutrient biogeochemistry in the past, as these conditions have changed markedly over the Earth's history.
Keyword(s):
Biomass/Abundance/Elemental composition; Bottles or small containers/Aquaria (<20 L); Chromista; Coast and continental shelf; Growth/Morphology; Laboratory experiment; Micro-nutrients; North Pacific; Ochrophyta; Pelagos; Phytoplankton; Pseudo-nitzschia pseudodelicatissima; Single species; Temperate
Further details:
Lavigne, Héloïse; Epitalon, Jean-Marie; Gattuso, Jean-Pierre (2014): seacarb: seawater carbonate chemistry with R. R package version 3.0. https://cran.r-project.org/package=seacarb
Coverage:
Latitude: 34.770000 * Longitude: 134.700000
Event(s):
Harima_Nada * Latitude: 34.770000 * Longitude: 134.700000 * Method/Device: Experiment (EXP)
Comment:
In order to allow full comparability with other ocean acidification data sets, the R package seacarb (Lavigne et al, 2014) was used to compute a complete and consistent set of carbonate system variables, as described by Nisumaa et al. (2010). In this dataset the original values were archived in addition with the recalculated parameters (see related PI). The date of carbonate chemistry calculation is 2014-07-07.
Parameter(s):
#NameShort NameUnitPrincipal InvestigatorMethod/DeviceComment
SpeciesSpeciesSugie, Koji
TreatmentTreatSugie, Koji
IdentificationIDSugie, Koji
Abundance per volumeAbund v#/mlSugie, Koji
Growth rateµ1/daySugie, Koji
Cell biovolumeCell biovolµm3Sugie, Koji
AreaAreaµm2Sugie, Kojisurface
Phosphorus, particulatePPµmol/lSugie, Koji
Biogenic silicabSiO2µmol/lSugie, Koji
10 Nitrogen, total, particulateTPNµmol/lSugie, Koji
11 Carbon, organic, particulatePOCµmol/lSugie, Koji
12 Iron, dissolved, inorganicFe´ disspmol/lSugie, Kojiat the start of experiment
13 Iron, dissolved, inorganicFe´ disspmol/lSugie, Kojiat the end of experiment
14 Iron, dissolved, inorganicFe´ disspmol/lSugie, Kojimean
15 SalinitySalSugie, Koji
16 Temperature, waterTemp°CSugie, Koji
17 IrradianceEµmol/m2/sSugie, Koji
18 Nitrate and Nitrite[NO3]- + [NO2]-µmol/lSugie, Koji
19 Phosphate[PO4]3-µmol/lSugie, Koji
20 SilicateSi(OH)4µmol/lSugie, Koji
21 Alkalinity, totalATµmol/kgSugie, KojiPotentiometric titrationat the start of experiment
22 Carbon, inorganic, dissolvedDICµmol/kgSugie, KojiCoulometric titrationat the start of experiment
23 pHpHSugie, KojiCalculatedtotal scale,at the start of experiment
24 Partial pressure of carbon dioxide (water) at sea surface temperature (wet air)pCO2water_SST_wetµatmSugie, KojiCalculatedat the start of experiment
25 Alkalinity, totalATµmol/kgSugie, KojiPotentiometric titrationat the end of experiment
26 Carbon, inorganic, dissolvedDICµmol/kgSugie, KojiCoulometric titrationat the end of experiment
27 pHpHSugie, KojiCalculatedtotal scale, at the end of experiment
28 Partial pressure of carbon dioxide (water) at sea surface temperature (wet air)pCO2water_SST_wetµatmSugie, KojiCalculatedat the end of experiment
29 Carbonate system computation flagCSC flagYang, YanCalculated using seacarb after Nisumaa et al. (2010)
30 pHpHYang, YanCalculated using seacarb after Nisumaa et al. (2010)total scale, at the start of experiment
31 Carbon dioxideCO2µmol/kgYang, YanCalculated using seacarb after Nisumaa et al. (2010)at the start of experiment
32 Partial pressure of carbon dioxide (water) at sea surface temperature (wet air)pCO2water_SST_wetµatmYang, YanCalculated using seacarb after Nisumaa et al. (2010)at the start of experiment
33 Fugacity of carbon dioxide (water) at sea surface temperature (wet air)fCO2water_SST_wetµatmYang, YanCalculated using seacarb after Nisumaa et al. (2010)at the start of experiment
34 Bicarbonate ion[HCO3]-µmol/kgYang, YanCalculated using seacarb after Nisumaa et al. (2010)at the start of experiment
35 Carbonate ion[CO3]2-µmol/kgYang, YanCalculated using seacarb after Nisumaa et al. (2010)at the start of experiment
36 Aragonite saturation stateOmega ArgYang, YanCalculated using seacarb after Nisumaa et al. (2010)at the start of experiment
37 Calcite saturation stateOmega CalYang, YanCalculated using seacarb after Nisumaa et al. (2010)at the start of experiment
38 pHpHYang, YanCalculated using seacarb after Nisumaa et al. (2010)total scale, at the end of experiment
39 Carbon dioxideCO2µmol/kgYang, YanCalculated using seacarb after Nisumaa et al. (2010)at the end of experiment
40 Partial pressure of carbon dioxide (water) at sea surface temperature (wet air)pCO2water_SST_wetµatmYang, YanCalculated using seacarb after Nisumaa et al. (2010)at the end of experiment
41 Fugacity of carbon dioxide (water) at sea surface temperature (wet air)fCO2water_SST_wetµatmYang, YanCalculated using seacarb after Nisumaa et al. (2010)at the end of experiment
42 Bicarbonate ion[HCO3]-µmol/kgYang, YanCalculated using seacarb after Nisumaa et al. (2010)at the end of experiment
43 Carbonate ion[CO3]2-µmol/kgYang, YanCalculated using seacarb after Nisumaa et al. (2010)at the end of experiment
44 Aragonite saturation stateOmega ArgYang, YanCalculated using seacarb after Nisumaa et al. (2010)at the end of experiment
45 Calcite saturation stateOmega CalYang, YanCalculated using seacarb after Nisumaa et al. (2010)at the end of experiment
Status:
Curation Level: Enhanced curation (CurationLevelC)
Size:
1800 data points

Data

Download dataset as tab-delimited text — use the following character encoding:


Species

Treat

ID

Abund v [#/ml]

µ [1/day]

Cell biovol [µm3]

Area [µm2]
(surface)

PP [µmol/l]

bSiO2 [µmol/l]
10 
TPN [µmol/l]
11 
POC [µmol/l]
12 
Fe´ diss [pmol/l]
(at the start of experiment)
13 
Fe´ diss [pmol/l]
(at the end of experiment)
14 
Fe´ diss [pmol/l]
(mean)
15 
Sal
16 
Temp [°C]
17 
E [µmol/m2/s]
18 
[NO3]- + [NO2]- [µmol/l]
19 
[PO4]3- [µmol/l]
20 
Si(OH)4 [µmol/l]
21 
AT [µmol/kg]
(at the start of experiment, P...)
22 
DIC [µmol/kg]
(at the start of experiment, C...)
23 
pH
(total scale,at the start of e...)
24 
pCO2water_SST_wet [µatm]
(at the start of experiment, C...)
25 
AT [µmol/kg]
(at the end of experiment, Pot...)
26 
DIC [µmol/kg]
(at the end of experiment, Cou...)
27 
pH
(total scale, at the end of ex...)
28 
pCO2water_SST_wet [µatm]
(at the end of experiment, Cal...)
29 
CSC flag
(Calculated using seacarb afte...)
30 
pH
(total scale, at the start of ...)
31 
CO2 [µmol/kg]
(at the start of experiment, C...)
32 
pCO2water_SST_wet [µatm]
(at the start of experiment, C...)
33 
fCO2water_SST_wet [µatm]
(at the start of experiment, C...)
34 
[HCO3]- [µmol/kg]
(at the start of experiment, C...)
35 
[CO3]2- [µmol/kg]
(at the start of experiment, C...)
36 
Omega Arg
(at the start of experiment, C...)
37 
Omega Cal
(at the start of experiment, C...)
38 
pH
(total scale, at the end of ex...)
39 
CO2 [µmol/kg]
(at the end of experiment, Cal...)
40 
pCO2water_SST_wet [µatm]
(at the end of experiment, Cal...)
41 
fCO2water_SST_wet [µatm]
(at the end of experiment, Cal...)
42 
[HCO3]- [µmol/kg]
(at the end of experiment, Cal...)
43 
[CO3]2- [µmol/kg]
(at the end of experiment, Cal...)
44 
Omega Arg
(at the end of experiment, Cal...)
45 
Omega Cal
(at the end of experiment, Cal...)
Pseudo-nitzschia pseudodelicatissima (phytoplankton)pCO2 171 ppm171Fe1-140000.0001.30277.02131.20.3359.45.7636.534.096.145.134.2201001013.51502336.521952.678.246233.22328.431888.498.328182.0158.26722322216772694.206.468.34617317315773064.777.35
Pseudo-nitzschia pseudodelicatissima (phytoplankton)pCO2 171 ppm171Fe1-240833.3331.28477.02131.20.4939.96.6041.873.656.425.034.2201001013.51502334.091966.278.223249.32328.171881.908.337177.0158.24823923817002584.036.218.35516916815673104.847.45
Pseudo-nitzschia pseudodelicatissima (phytoplankton)pCO2 171 ppm171Fe2-137083.3331.43580.35134.10.46310.37.4748.197.1814.1910.734.2201001013.51502337.981957.338.242236.72351.631871.928.378158.1158.25722622616832674.166.418.39515015015343335.208.01
Pseudo-nitzschia pseudodelicatissima (phytoplankton)pCO2 171 ppm171Fe2-236562.5001.50380.35134.10.51110.87.4346.446.6012.509.534.2201001013.51502338.921969.658.225249.02324.081866.748.353168.4158.24823823717032594.056.238.37516016015453174.957.62
Pseudo-nitzschia pseudodelicatissima (phytoplankton)pCO2 171 ppm171Fe3-139270.8331.61180.84134.80.53611.87.8447.9318.1128.2223.234.2201001013.51502337.961945.638.259225.02329.091875.008.347171.7158.27721521416642744.286.608.36516416315553154.927.58
Pseudo-nitzschia pseudodelicatissima (phytoplankton)pCO2 171 ppm171Fe3-238020.8331.71580.84134.80.53411.18.1549.4711.9025.9518.934.2201001013.51502335.241999.918.172289.22322.071881.048.331180.0158.18927727617542373.705.698.34617217115693064.787.36
Pseudo-nitzschia pseudodelicatissima (phytoplankton)pCO2 171 ppm171Fe4-159218.7501.77089.93140.00.78816.213.8282.2331.9874.3253.234.2201001013.51502336.811959.118.238239.22319.711823.768.406142.8158.25722922816872654.136.378.42413613514773425.348.23
Pseudo-nitzschia pseudodelicatissima (phytoplankton)pCO2 171 ppm171Fe4-246718.7501.67589.93140.00.71014.411.4867.4229.5356.9743.334.2201001013.51502336.931970.068.222251.02323.401865.958.354168.1158.23824024017052584.026.198.37516016015443174.957.62
Pseudo-nitzschia pseudodelicatissima (phytoplankton)pCO2 171 ppm171Fe5-147291.6671.79985.05138.20.63714.511.3367.3258.58111.5085.034.2201001013.51502333.911966.468.223249.82314.511859.308.352168.2158.24823923817012584.026.208.37516016015393154.927.58
Pseudo-nitzschia pseudodelicatissima (phytoplankton)pCO2 171 ppm171Fe5-239687.5001.77585.05138.20.53612.69.8958.9853.1697.4275.334.2201001013.51502338.611983.738.202265.52319.041882.588.325182.9158.22825425317262503.906.018.34617417415743034.737.28
Pseudo-nitzschia pseudodelicatissima (phytoplankton)pCO2 386 ppm386Fe1-146093.7501.15266.81122.10.2379.45.5736.684.054.574.334.2201001013.51502334.182063.708.062393.82324.222039.438.089363.9158.071237837618571953.044.688.101134934818252033.184.89
Pseudo-nitzschia pseudodelicatissima (phytoplankton)pCO2 386 ppm386Fe1-244531.2501.08566.81122.10.26211.06.2240.743.934.504.234.2201001013.51502338.552071.568.056402.02327.372044.428.086367.9158.071338638418671923.004.638.101135335218312023.164.87
Pseudo-nitzschia pseudodelicatissima (phytoplankton)pCO2 386 ppm386Fe2-134791.6671.31467.88122.80.34510.26.2239.917.189.358.334.2201001013.51502336.442075.218.045413.42329.642036.128.104350.4158.061339639518741892.954.548.121133633518162093.275.03
Pseudo-nitzschia pseudodelicatissima (phytoplankton)pCO2 386 ppm386Fe2-243645.8331.29967.88122.80.4189.76.5643.107.139.508.334.2201001013.51502334.812074.568.044414.82326.982031.708.107346.5158.061339839718741882.934.528.121133233118112103.285.06
Pseudo-nitzschia pseudodelicatissima (phytoplankton)pCO2 386 ppm386Fe3-150703.1251.55871.66125.60.52914.110.4262.8617.8127.5722.734.2201001013.51502337.332073.708.050408.32320.712003.498.145310.2158.061339239118711902.974.588.161029729617692243.505.40
Pseudo-nitzschia pseudodelicatissima (phytoplankton)pCO2 386 ppm386Fe3-250885.4171.56571.66125.60.53914.810.4964.2118.3326.5922.534.2201001013.51502337.422070.208.056400.92318.522006.138.138316.7158.071238538418651933.014.638.151030430317752213.455.32
Pseudo-nitzschia pseudodelicatissima (phytoplankton)pCO2 386 ppm386Fe4-199218.7501.82568.29122.11.31723.020.67119.1233.2384.5958.934.2201001013.51502335.922079.788.037422.42316.471941.878.237237.4158.051340740518811852.894.468.25722822716732624.096.30
Pseudo-nitzschia pseudodelicatissima (phytoplankton)pCO2 386 ppm386Fe4-286015.6251.77868.29122.11.17321.718.40108.5535.6380.0357.834.2201001013.51502338.302073.448.053405.22373.081999.828.226252.0158.061339038918701912.984.608.24824224117292634.116.33
Pseudo-nitzschia pseudodelicatissima (phytoplankton)pCO2 386 ppm386Fe5-189375.0001.83987.51139.00.95719.919.57113.1372.10169.50120.834.2201001013.51502337.632070.868.057400.92313.921938.768.239236.2158.071338638518661923.004.628.25722722616692624.096.30
Pseudo-nitzschia pseudodelicatissima (phytoplankton)pCO2 386 ppm386Fe5-276354.1671.82487.51139.00.89418.918.02105.4371.01153.40112.234.2201001013.51502337.332072.458.053404.92315.591953.778.218251.3158.061338938818691912.984.608.23824124016932533.956.09
Pseudo-nitzschia pseudodelicatissima (phytoplankton)pCO2 614 ppm614Fe1-184062.5001.06763.36119.10.50911.97.5850.183.324.173.734.2201001013.51502337.992151.417.895619.42329.212116.597.952531.0157.911959559319901422.213.417.961751050819421582.463.79
Pseudo-nitzschia pseudodelicatissima (phytoplankton)pCO2 614 ppm614Fe1-276718.7501.03963.36119.10.53412.67.5449.043.564.033.834.2201001013.51502340.232145.477.913591.82323.692115.207.944540.9157.931856856719801472.293.537.961751951819431552.423.73
Pseudo-nitzschia pseudodelicatissima (phytoplankton)pCO2 614 ppm614Fe2-159531.2501.33167.11121.10.51112.99.0959.516.799.138.034.2201001013.51502338.342146.067.908599.32320.322094.397.980490.2157.921957657419821452.273.507.991547146919131662.593.99
Pseudo-nitzschia pseudodelicatissima (phytoplankton)pCO2 614 ppm614Fe2-252656.2501.29767.11121.10.32012.88.7559.676.688.307.534.2201001013.51502338.392148.107.903606.32324.712109.767.957522.2157.921958258019851442.253.477.971650250019341592.483.82
Pseudo-nitzschia pseudodelicatissima (phytoplankton)pCO2 614 ppm614Fe3-178645.8331.67269.44123.00.65720.514.6589.5417.2926.1721.734.2201001013.51502338.412141.627.918583.72315.112070.728.017442.2157.931856155919751482.313.568.031442542318801772.774.26
Pseudo-nitzschia pseudodelicatissima (phytoplankton)pCO2 614 ppm614Fe3-266354.1671.61069.44123.00.55418.013.6784.2716.1827.6321.934.2201001013.51502336.032147.127.901609.52320.622069.308.030428.5157.911958658419851432.243.458.041341241018741822.844.37
Pseudo-nitzschia pseudodelicatissima (phytoplankton)pCO2 614 ppm614Fe4-1140000.0001.91779.91133.61.16127.423.43139.7732.8474.6053.734.2201001013.51502342.782151.347.907601.82315.342027.028.099353.3157.921958157919881452.263.498.111134033918112053.214.94
Pseudo-nitzschia pseudodelicatissima (phytoplankton)pCO2 614 ppm614Fe4-2122500.0001.90879.91133.60.87629.024.38144.1733.7368.1951.034.2201001013.51502339.382145.037.914590.62317.782040.448.079373.7157.921856956819801472.293.538.091236035918301983.104.77
Pseudo-nitzschia pseudodelicatissima (phytoplankton)pCO2 614 ppm614Fe5-1133125.0001.99484.03135.90.80123.622.75131.1364.19124.1094.134.2201001013.51502340.932151.937.902609.72316.082050.168.058395.2157.911958858619891432.243.458.071238137918471912.984.59
Pseudo-nitzschia pseudodelicatissima (phytoplankton)pCO2 614 ppm614Fe5-2113125.0001.94784.03135.91.00523.021.01126.7367.34152.00109.734.2201001013.51502338.972144.487.914590.62314.232023.298.103348.9157.921856956719791472.293.538.111133533418052073.234.98
Pseudo-nitzschia pseudodelicatissima (phytoplankton)pCO2 795 ppm795Fe1-1103593.7501.11667.15123.10.51414.29.7463.473.233.693.534.2201001013.51502333.092181.967.814764.12329.362163.047.850694.0157.832473473220381211.882.907.862266766420121292.023.11
Pseudo-nitzschia pseudodelicatissima (phytoplankton)pCO2 795 ppm795Fe1-284166.6671.08667.15123.10.47612.48.4154.553.173.633.434.2201001013.51502337.222188.057.809776.22330.262165.867.846703.0157.822474574320441191.872.877.862267567320161282.003.09
Pseudo-nitzschia pseudodelicatissima (phytoplankton)pCO2 795 ppm795Fe2-146406.2501.32763.30118.90.32710.17.3149.726.257.406.834.2201001013.51502334.702185.127.810772.82334.052164.987.856685.2157.822474274020411201.872.887.872165865620121312.053.15
Pseudo-nitzschia pseudodelicatissima (phytoplankton)pCO2 795 ppm795Fe2-254531.2501.35963.30118.90.35811.37.6951.916.527.897.234.2201001013.51502337.182182.557.822750.32332.612156.157.873655.1157.832372071820361231.922.957.892062962720001362.123.26
Pseudo-nitzschia pseudodelicatissima (phytoplankton)pCO2 795 ppm795Fe3-171765.0471.57465.79120.70.54916.012.4278.6415.9422.7219.334.2201001013.51502339.352186.107.819757.32330.492136.647.912590.5157.832472872520411221.902.937.921856756519721462.283.51
Pseudo-nitzschia pseudodelicatissima (phytoplankton)pCO2 795 ppm795Fe3-265312.5001.51865.79120.70.54615.111.9373.1315.6522.6519.234.2201001013.51502338.322187.267.813767.12333.802140.097.911592.5157.832473773520431211.882.907.921856956719761462.283.51
Pseudo-nitzschia pseudodelicatissima (phytoplankton)pCO2 795 ppm795Fe4-1126718.7501.91787.11138.41.02026.324.42140.6532.3258.9945.734.2201001013.51502338.442183.567.824745.92325.012100.707.978494.4157.832372071720371231.922.967.991547747519201652.573.97
Pseudo-nitzschia pseudodelicatissima (phytoplankton)pCO2 795 ppm795Fe4-2121354.1671.85587.11138.41.00023.022.41131.4331.9369.7550.834.2201001013.51502333.612180.317.821751.32326.262081.868.017445.2157.832472472220351221.902.938.031442942718901782.774.27
Pseudo-nitzschia pseudodelicatissima (phytoplankton)pCO2 795 ppm795Fe5-185625.0001.93376.30129.60.60716.516.96101.3465.36106.4085.934.2201001013.51502339.072182.527.827740.92325.132112.657.953529.0157.842371371020361241.932.987.961650950719391572.463.79
Pseudo-nitzschia pseudodelicatissima (phytoplankton)pCO2 795 ppm795Fe5-285156.2501.91976.30129.60.70716.517.34102.2364.31104.5084.434.2201001013.51502335.262180.757.823748.12323.202113.017.948534.8157.832372071720351231.912.957.961751451319401562.433.75