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Cornwall, Christopher Edward; Hepburn, Christopher D; McGraw, Christina M; Currie, Kim I; Pilditch, Conrad A; Hunter, Keith A; Boyd, Philip W; Hurd, Catriona L (2013): Diurnal fluctuations in seawater pH influence the response of a calcifying macroalga to ocean acidification [dataset]. PANGAEA, https://doi.org/10.1594/PANGAEA.833265, Supplement to: Cornwall, CE et al. (2013): Diurnal fluctuations in seawater pH influence the response of a calcifying macroalga to ocean acidification. Proceedings of the Royal Society B-Biological Sciences, 280(1772), 20132201-20132201, https://doi.org/10.1098/rspb.2013.2201

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Abstract:
Coastal ecosystems that are characterized by kelp forests encounter daily pH fluctuations, driven by photosynthesis and respiration, which are larger than pH changes owing to ocean acidification (OA) projected for surface ocean waters by 2100. We investigated whether mimicry of biologically mediated diurnal shifts in pH-based for the first time on pH time-series measurements within a kelp forest-would offset or amplify the negative effects of OA on calcifiers. In a 40-day laboratory experiment, the calcifying coralline macroalga, Arthrocardia corymbosa, was exposed to two mean pH treatments (8.05 or 7.65). For each mean, two experimental pH manipulations were applied. In one treatment, pH was held constant. In the second treatment, pH was manipulated around the mean (as a step-function), 0.4 pH units higher during daylight and 0.4 units lower during darkness to approximate diurnal fluctuations in a kelp forest. In all cases, growth rates were lower at a reduced mean pH, and fluctuations in pH acted additively to further reduce growth. Photosynthesis, recruitment and elemental composition did not change with pH, but ?(13)C increased at lower mean pH. Including environmental heterogeneity in experimental design will assist with a more accurate assessment of the responses of calcifiers to OA.
Keyword(s):
Arthrocardia corymbosa; Benthos; Biomass/Abundance/Elemental composition; Bottles or small containers/Aquaria (<20 L); Coast and continental shelf; Growth/Morphology; Laboratory experiment; Macroalgae; Other; Plantae; Primary production/Photosynthesis; Reproduction; Rhodophyta; Single species; South Pacific; Temperate
Further details:
Lavigne, Héloïse; Epitalon, Jean-Marie; Gattuso, Jean-Pierre (2014): seacarb: seawater carbonate chemistry with R. R package version 3.0. https://cran.r-project.org/package=seacarb
Coverage:
Latitude: -45.638890 * Longitude: 170.670830
Date/Time Start: 2011-03-13T00:00:00 * Date/Time End: 2011-04-30T00:00:00
Event(s):
Karitane * Latitude: -45.638890 * Longitude: 170.670830 * Date/Time Start: 2011-03-13T00:00:00 * Date/Time End: 2011-04-30T00:00:00 * Method/Device: Experiment (EXP)
Comment:
In order to allow full comparability with other ocean acidification data sets, the R package seacarb (Lavigne et al, 2014) was used to compute a complete and consistent set of carbonate system variables, as described by Nisumaa et al. (2010). In this dataset the original values were archived in addition with the recalculated parameters (see related PI). The date of carbonate chemistry calculation is 2014-06-10.
Parameter(s):
#NameShort NameUnitPrincipal InvestigatorMethod/DeviceComment
SpeciesSpeciesCornwall, Christopher Edward
TreatmentTreatCornwall, Christopher Edward
Incubation durationInc durdaysCornwall, Christopher Edward
Gross photosynthesis rate, oxygenPG O2µmol/g/sCornwall, Christopher Edward
Gross photosynthesis rate, oxygen, standard errorPG O2 std e±Cornwall, Christopher Edward
Growth rateµ1/dayCornwall, Christopher Edward
Growth rate, standard errorµ std e±Cornwall, Christopher Edward
RecruitmentRecruitment#/cm2Cornwall, Christopher Edward
Recruitment, standard errorRecruitment std e±Cornwall, Christopher Edward
10 Maximum photochemical quantum yield of photosystem IIFv/FmCornwall, Christopher Edward
11 Maximum photochemical quantum yield of photosystem II, standard errorFv/Fm std e±Cornwall, Christopher Edward
12 CalciumCa%Cornwall, Christopher Edward
13 Calcium, standard errorCa std e±Cornwall, Christopher Edward
14 MagnesiumMg%Cornwall, Christopher Edward
15 Magnesium, standard errorMg std e±Cornwall, Christopher Edward
16 Magnesium carbonate, magnesiteMgCO3%Cornwall, Christopher Edward
17 Magnesium carbonate, magnesite, standard errorMgCO3 std e±Cornwall, Christopher Edward
18 δ13C, inorganic carbonδ13C C inorg‰ PDBCornwall, Christopher Edward
19 δ13C, inorganic carbon, standard errorδ13C C inorg std e±Cornwall, Christopher Edward
20 Chlorophyll aChl aµg/gCornwall, Christopher Edward
21 Chlorophyll a, standard errorChl a std e±Cornwall, Christopher Edward
22 PhycocyaninPhycocµg/gCornwall, Christopher Edward
23 Phycocyanin, standard errorPhycoc std e±Cornwall, Christopher Edward
24 PhycoerythrinPhycoeµg/gCornwall, Christopher Edward
25 Phycoerythrin, standard errorPhycoe std e±Cornwall, Christopher Edward
26 Carbon/Nitrogen ratioC/NCornwall, Christopher Edward
27 Carbon/Nitrogen ratio, standard errorC/N std e±Cornwall, Christopher Edward
28 δ13C, organic carbonδ13C Corg‰ PDBCornwall, Christopher Edward
29 δ13C, organic carbon, standard errorδ13C Corg std e±Cornwall, Christopher Edward
30 δ15N, organic matterδ15N OM‰ airCornwall, Christopher Edward
31 δ15N, organic matter, standard errorδ15N OM std e±Cornwall, Christopher Edward
32 Temperature, waterTemp°CCornwall, Christopher Edward
33 SalinitySalCornwall, Christopher Edward
34 pHpHCornwall, Christopher EdwardPotentiometricday, total scale, mixing
35 pH, standard errorpH std e±Cornwall, Christopher EdwardPotentiometricday, total scale, mixing
36 pHpHCornwall, Christopher EdwardPotentiometricday, total scale, culture
37 pH, standard errorpH std e±Cornwall, Christopher EdwardPotentiometricday, total scale, culture
38 Alkalinity, totalATµmol/kgCornwall, Christopher EdwardPotentiometric titrationday
39 Alkalinity, total, standard errorAT std e±Cornwall, Christopher EdwardPotentiometric titrationday
40 Carbon, inorganic, dissolvedDICµmol/kgCornwall, Christopher EdwardCalculatedday
41 Carbon, inorganic, dissolved, standard errorDIC std e±Cornwall, Christopher EdwardCalculatedday
42 Partial pressure of carbon dioxide (water) at sea surface temperature (wet air)pCO2water_SST_wetµatmCornwall, Christopher EdwardCalculatedday
43 Partial pressure of carbon dioxide (water) at sea surface temperature (wet air), standard errorpCO2water_SST_wet std e±Cornwall, Christopher EdwardCalculatedday
44 Carbonate ion[CO3]2-µmol/kgCornwall, Christopher EdwardCalculatedday
45 Carbonate ion, standard error[CO3]2- std e±Cornwall, Christopher EdwardCalculatedday
46 Bicarbonate ion[HCO3]-µmol/kgCornwall, Christopher EdwardCalculatedday
47 Bicarbonate ion, standard error[HCO3]- std e±Cornwall, Christopher EdwardCalculatedday
48 pHpHCornwall, Christopher EdwardPotentiometricnight, total scale, mixing
49 pH, standard errorpH std e±Cornwall, Christopher EdwardPotentiometricnight, total scale, mixing
50 pHpHCornwall, Christopher EdwardPotentiometricnight, total scale, culture
51 pH, standard errorpH std e±Cornwall, Christopher EdwardPotentiometricnight, total scale, culture
52 Alkalinity, totalATµmol/kgCornwall, Christopher EdwardPotentiometric titrationnight
53 Alkalinity, total, standard errorAT std e±Cornwall, Christopher EdwardPotentiometric titrationnight
54 Carbon, inorganic, dissolvedDICµmol/kgCornwall, Christopher EdwardCalculatednight
55 Carbon, inorganic, dissolved, standard errorDIC std e±Cornwall, Christopher EdwardCalculatednight
56 Partial pressure of carbon dioxide (water) at sea surface temperature (wet air)pCO2water_SST_wetµatmCornwall, Christopher EdwardCalculatednight
57 Partial pressure of carbon dioxide (water) at sea surface temperature (wet air), standard errorpCO2water_SST_wet std e±Cornwall, Christopher EdwardCalculatednight
58 Carbonate ion[CO3]2-µmol/kgCornwall, Christopher EdwardCalculatednight
59 Carbonate ion, standard error[CO3]2- std e±Cornwall, Christopher EdwardCalculatednight
60 Bicarbonate ion[HCO3]-µmol/kgCornwall, Christopher EdwardCalculatednight
61 Bicarbonate ion, standard error[HCO3]- std e±Cornwall, Christopher EdwardCalculatednight
62 Carbonate system computation flagCSC flagYang, YanCalculated using seacarb after Nisumaa et al. (2010)night
63 Carbon dioxideCO2µmol/kgYang, YanCalculated using seacarb after Nisumaa et al. (2010)day
64 Partial pressure of carbon dioxide (water) at sea surface temperature (wet air)pCO2water_SST_wetµatmYang, YanCalculated using seacarb after Nisumaa et al. (2010)day
65 Fugacity of carbon dioxide (water) at sea surface temperature (wet air)fCO2water_SST_wetµatmYang, YanCalculated using seacarb after Nisumaa et al. (2010)day
66 Bicarbonate ion[HCO3]-µmol/kgYang, YanCalculated using seacarb after Nisumaa et al. (2010)day
67 Carbonate ion[CO3]2-µmol/kgYang, YanCalculated using seacarb after Nisumaa et al. (2010)day
68 Carbon, inorganic, dissolvedDICµmol/kgYang, YanCalculated using seacarb after Nisumaa et al. (2010)day
69 Aragonite saturation stateOmega ArgYang, YanCalculated using seacarb after Nisumaa et al. (2010)day
70 Calcite saturation stateOmega CalYang, YanCalculated using seacarb after Nisumaa et al. (2010)day
71 Carbon dioxideCO2µmol/kgYang, YanCalculated using seacarb after Nisumaa et al. (2010)night
72 Partial pressure of carbon dioxide (water) at sea surface temperature (wet air)pCO2water_SST_wetµatmYang, YanCalculated using seacarb after Nisumaa et al. (2010)night
73 Fugacity of carbon dioxide (water) at sea surface temperature (wet air)fCO2water_SST_wetµatmYang, YanCalculated using seacarb after Nisumaa et al. (2010)night
74 Bicarbonate ion[HCO3]-µmol/kgYang, YanCalculated using seacarb after Nisumaa et al. (2010)night
75 Carbonate ion[CO3]2-µmol/kgYang, YanCalculated using seacarb after Nisumaa et al. (2010)night
76 Carbon, inorganic, dissolvedDICµmol/kgYang, YanCalculated using seacarb after Nisumaa et al. (2010)night
77 Aragonite saturation stateOmega ArgYang, YanCalculated using seacarb after Nisumaa et al. (2010)night
78 Calcite saturation stateOmega CalYang, YanCalculated using seacarb after Nisumaa et al. (2010)night
Status:
Curation Level: Enhanced curation (CurationLevelC)
Size:
1763 data points

Data

Download dataset as tab-delimited text — use the following character encoding:


Species

Treat

Inc dur [days]

PG O2 [µmol/g/s]

PG O2 std e [±]

µ [1/day]

µ std e [±]

Recruitment [#/cm2]

Recruitment std e [±]
10 
Fv/Fm
11 
Fv/Fm std e [±]
12 
Ca [%]
13 
Ca std e [±]
14 
Mg [%]
15 
Mg std e [±]
16 
MgCO3 [%]
17 
MgCO3 std e [±]
18 
δ13C C inorg [‰ PDB]
19 
δ13C C inorg std e [±]
20 
Chl a [µg/g]
21 
Chl a std e [±]
22 
Phycoc [µg/g]
23 
Phycoc std e [±]
24 
Phycoe [µg/g]
25 
Phycoe std e [±]
26 
C/N
27 
C/N std e [±]
28 
δ13C Corg [‰ PDB]
29 
δ13C Corg std e [±]
30 
δ15N OM [‰ air]
31 
δ15N OM std e [±]
32 
Temp [°C]
33 
Sal
34 
pH
(day, total scale, mixing, Pot...)
35 
pH std e [±]
(day, total scale, mixing, Pot...)
36 
pH
(day, total scale, culture, Po...)
37 
pH std e [±]
(day, total scale, culture, Po...)
38 
AT [µmol/kg]
(day, Potentiometric titration)
39 
AT std e [±]
(day, Potentiometric titration)
40 
DIC [µmol/kg]
(day, Calculated)
41 
DIC std e [±]
(day, Calculated)
42 
pCO2water_SST_wet [µatm]
(day, Calculated)
43 
pCO2water_SST_wet std e [±]
(day, Calculated)
44 
[CO3]2- [µmol/kg]
(day, Calculated)
45 
[CO3]2- std e [±]
(day, Calculated)
46 
[HCO3]- [µmol/kg]
(day, Calculated)
47 
[HCO3]- std e [±]
(day, Calculated)
48 
pH
(night, total scale, mixing, P...)
49 
pH std e [±]
(night, total scale, mixing, P...)
50 
pH
(night, total scale, culture, ...)
51 
pH std e [±]
(night, total scale, culture, ...)
52 
AT [µmol/kg]
(night, Potentiometric titration)
53 
AT std e [±]
(night, Potentiometric titration)
54 
DIC [µmol/kg]
(night, Calculated)
55 
DIC std e [±]
(night, Calculated)
56 
pCO2water_SST_wet [µatm]
(night, Calculated)
57 
pCO2water_SST_wet std e [±]
(night, Calculated)
58 
[CO3]2- [µmol/kg]
(night, Calculated)
59 
[CO3]2- std e [±]
(night, Calculated)
60 
[HCO3]- [µmol/kg]
(night, Calculated)
61 
[HCO3]- std e [±]
(night, Calculated)
62 
CSC flag
(night, Calculated using seaca...)
63 
CO2 [µmol/kg]
(day, Calculated using seacarb...)
64 
pCO2water_SST_wet [µatm]
(day, Calculated using seacarb...)
65 
fCO2water_SST_wet [µatm]
(day, Calculated using seacarb...)
66 
[HCO3]- [µmol/kg]
(day, Calculated using seacarb...)
67 
[CO3]2- [µmol/kg]
(day, Calculated using seacarb...)
68 
DIC [µmol/kg]
(day, Calculated using seacarb...)
69 
Omega Arg
(day, Calculated using seacarb...)
70 
Omega Cal
(day, Calculated using seacarb...)
71 
CO2 [µmol/kg]
(night, Calculated using seaca...)
72 
pCO2water_SST_wet [µatm]
(night, Calculated using seaca...)
73 
fCO2water_SST_wet [µatm]
(night, Calculated using seaca...)
74 
[HCO3]- [µmol/kg]
(night, Calculated using seaca...)
75 
[CO3]2- [µmol/kg]
(night, Calculated using seaca...)
76 
DIC [µmol/kg]
(night, Calculated using seaca...)
77 
Omega Arg
(night, Calculated using seaca...)
78 
Omega Cal
(night, Calculated using seaca...)
Arthrocardia corymbosa (macroalga)Static pH 8.050.003982780.00058513.6666703.81808610.834.38.050.018.040.0124206222024150.31430.1206028.040.018.000.0124206223014220.21420.120701818429427207214122322.153.3820476475209913022501.983.12
Arthrocardia corymbosa (macroalga)Fluctuating pH 8.050.001428460.0007529.6666674.07158210.834.38.430.018.390.0124405203021450.12890.3173027.650.017.650.01240052360211500.8620.12250287164164177527120534.126.47491141113722466223570.951.49
Arthrocardia corymbosa (macroalga)Static pH 7.650.001489540.00083519.83333011.63448010.834.37.650.017.680.01240062360211301.0630.1225027.650.017.640.01240062360211301.0620.1224028451060105622366623481.011.59501170116522496123600.931.46
Arthrocardia corymbosa (macroalga)Fluctuating pH 7.650.000066900.00029215.5000007.71038310.834.38.050.018.020.0124201222014100.31440.1206017.250.017.320.02238012470129602.0250.123202819452450208613622412.063.241072505249623063024430.460.72
Arthrocardia corymbosa (macroalga)Static pH 8.0510.040.0110.834.38.050.018.040.0124206222024150.31430.1206028.040.018.000.0124206223014220.21420.120701818429427207214122322.153.3820476475209913022501.983.12
Arthrocardia corymbosa (macroalga)Fluctuating pH 8.0510.030.0110.834.38.430.018.390.0124405203021450.12890.3173027.650.017.650.01240052360211500.8620.12250287164164177527120534.126.47491141113722466223570.951.49
Arthrocardia corymbosa (macroalga)Static pH 7.6510.040.0110.834.37.650.017.680.01240062360211301.0630.1225027.650.017.640.01240062360211301.0620.1224028451060105622366623481.011.59501170116522496123600.931.46
Arthrocardia corymbosa (macroalga)Fluctuating pH 7.6510.040.0110.834.38.050.018.020.0124201222014100.31440.1206017.250.017.320.02238012470129602.0250.123202819452450208613622412.063.241072505249623063024430.460.72
Arthrocardia corymbosa (macroalga)Static pH 8.05100.070.0110.834.38.050.018.040.0124206222024150.31430.1206028.040.018.000.0124206223014220.21420.120701818429427207214122322.153.3820476475209913022501.983.12
Arthrocardia corymbosa (macroalga)Fluctuating pH 8.05100.020.0210.834.38.430.018.390.0124405203021450.12890.3173027.650.017.650.01240052360211500.8620.12250287164164177527120534.126.47491141113722466223570.951.49
Arthrocardia corymbosa (macroalga)Static pH 7.65100.040.0110.834.37.650.017.680.01240062360211301.0630.1225027.650.017.640.01240062360211301.0620.1224028451060105622366623481.011.59501170116522496123600.931.46
Arthrocardia corymbosa (macroalga)Fluctuating pH 7.65100.020.0110.834.38.050.018.020.0124201222014100.31440.1206017.250.017.320.02238012470129602.0250.123202819452450208613622412.063.241072505249623063024430.460.72
Arthrocardia corymbosa (macroalga)Static pH 8.05300.090.0210.834.38.050.018.040.0124206222024150.31430.1206028.040.018.000.0124206223014220.21420.120701818429427207214122322.153.3820476475209913022501.983.12
Arthrocardia corymbosa (macroalga)Fluctuating pH 8.05300.050.0110.834.38.430.018.390.0124405203021450.12890.3173027.650.017.650.01240052360211500.8620.12250287164164177527120534.126.47491141113722466223570.951.49
Arthrocardia corymbosa (macroalga)Static pH 7.65300.050.0110.834.37.650.017.680.01240062360211301.0630.1225027.650.017.640.01240062360211301.0620.1224028451060105622366623481.011.59501170116522496123600.931.46
Arthrocardia corymbosa (macroalga)Fluctuating pH 7.65300.050.0110.834.38.050.018.020.0124201222014100.31440.1206017.250.017.320.02238012470129602.0250.123202819452450208613622412.063.241072505249623063024430.460.72
Arthrocardia corymbosa (macroalga)Static pH 8.05400.050.0210.834.38.050.018.040.0124206222024150.31430.1206028.040.018.000.0124206223014220.21420.120701818429427207214122322.153.3820476475209913022501.983.12
Arthrocardia corymbosa (macroalga)Fluctuating pH 8.05400.030.0110.834.38.430.018.390.0124405203021450.12890.3173027.650.017.650.01240052360211500.8620.12250287164164177527120534.126.47491141113722466223570.951.49
Arthrocardia corymbosa (macroalga)Static pH 7.65400.040.0210.834.37.650.017.680.01240062360211301.0630.1225027.650.017.640.01240062360211301.0620.1224028451060105622366623481.011.59501170116522496123600.931.46
Arthrocardia corymbosa (macroalga)Fluctuating pH 7.65400.030.0110.834.38.050.018.020.0124201222014100.31440.1206017.250.017.320.02238012470129602.0250.123202819452450208613622412.063.241072505249623063024430.460.72
Arthrocardia corymbosa (macroalga)Static pH 8.0500.630.0110.834.38.050.018.040.0124206222024150.31430.1206028.040.018.000.0124206223014220.21420.120701818429427207214122322.153.3820476475209913022501.983.12
Arthrocardia corymbosa (macroalga)Fluctuating pH 8.0500.620.0110.834.38.430.018.390.0124405203021450.12890.3173027.650.017.650.01240052360211500.8620.12250287164164177527120534.126.47491141113722466223570.951.49
Arthrocardia corymbosa (macroalga)Static pH 7.6500.570.0410.834.37.650.017.680.01240062360211301.0630.1225027.650.017.640.01240062360211301.0620.1224028451060105622366623481.011.59501170116522496123600.931.46
Arthrocardia corymbosa (macroalga)Fluctuating pH 7.6500.630.0110.834.38.050.018.020.0124201222014100.31440.1206017.250.017.320.02238012470129602.0250.123202819452450208613622412.063.241072505249623063024430.460.72
Arthrocardia corymbosa (macroalga)Static pH 8.05400.570.0110.834.38.050.018.040.0124206222024150.31430.1206028.040.018.000.0124206223014220.21420.120701818429427207214122322.153.3820476475209913022501.983.12
Arthrocardia corymbosa (macroalga)Fluctuating pH 8.05400.580.0110.834.38.430.018.390.0124405203021450.12890.3173027.650.017.650.01240052360211500.8620.12250287164164177527120534.126.47491141113722466223570.951.49
Arthrocardia corymbosa (macroalga)Static pH 7.65400.580.0110.834.37.650.017.680.01240062360211301.0630.1225027.650.017.640.01240062360211301.0620.1224028451060105622366623481.011.59501170116522496123600.931.46
Arthrocardia corymbosa (macroalga)Fluctuating pH 7.65400.580.0110.834.38.050.018.020.0124201222014100.31440.1206017.250.017.320.02238012470129602.0250.123202819452450208613622412.063.241072505249623063024430.460.72
Arthrocardia corymbosa (macroalga)Initial0532.55.80.612.30.1-3.80.3170020031938.00.27-200.48.10.06
Arthrocardia corymbosa (macroalga)Static pH 8.0540555.36.30.112.40.3-3.20.2240040021928.80.53-200.48.10.2210.834.38.050.018.040.0124206222024150.31430.1206028.040.018.000.0124206223014220.21420.120701818429427207214122322.153.3820476475209913022501.983.12
Arthrocardia corymbosa (macroalga)Fluctuating pH 8.0540522.56.00.311.80.2-3.80.32100300111239.00.38-201.07.90.1410.834.38.430.018.390.0124405203021450.12890.3173027.650.017.650.01240052360211500.8620.12250287164164177527120534.126.47491141113722466223570.951.49
Arthrocardia corymbosa (macroalga)Static pH 7.6540531.66.10.112.40.2-3.70.3150040011929.51.80-221.27.90.1710.834.37.650.017.680.01240062360211301.0630.1225027.650.017.640.01240062360211301.0620.1224028451060105622366623481.011.59501170116522496123600.931.46
Arthrocardia corymbosa (macroalga)Fluctuating pH 7.6540552.56.20.212.90.4-4.00.4260030011828.20.29-220.68.00.1810.834.38.050.018.020.0124201222014100.31440.1206017.250.017.320.02238012470129602.0250.123202819452450208613622412.063.241072505249623063024430.460.72