Citation:

PANGAEA.831772

Name: Marine bivalve shell geochemistry and ultrastructure from modern low pH environments: environmental effect versus experimental bias
Published: 2012
License: https://creativecommons.org/licenses/by/3.0/
Keywords: Animalia; Benthic animals; Benthos; Calcification/Dissolution; CO2 vent; Coast and continental shelf; Field experiment; Growth/Morphology; Mediterranean Sea; Mollusca; Mytilus galloprovincialis; North Atlantic; Single species; Temperate

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Keyword(s):

Animalia; Benthic animals; Benthos; Calcification/Dissolution; CO2 vent; Coast and continental shelf; Field experiment; Growth/Morphology; Mediterranean Sea; Mollusca; Mytilus galloprovincialis; North Atlantic; Single species; Temperate

Related to:

Hahn, Sabine; Rodolfo-Metalpa, Riccardo; Griesshaber, Erika; Schmahl, Wolfgang W; Buhl, Dieter; Hall-Spencer, Jason M; Baggini, Cecilia; Fehr, Karl T; Immenhauser, Adrian (2012): Marine bivalve shell geochemistry and ultrastructure from modern low pH environments: environmental effect versus experimental bias. Biogeosciences, 9, 1897-1914, https://doi.org/10.5194/bg-9-1897-2012

Original version:

Hahn, Sabine; Rodolfo-Metalpa, Riccardo; Griesshaber, Erika; Schmahl, Wolfgang W; Buhl, Dieter; Hall-Spencer, Jason M; Baggini, Cecilia; Fehr, Karl T; Immenhauser, Adrian (2012): Isotope ratios, trace elements and ultrastructure results of Mytilus galloprovincialis shells and experimental site data off Ischia (Italy). PANGAEA, https://doi.org/10.1594/PANGAEA.808133

Further details:

Lavigne, Héloïse; Gattuso, Jean-Pierre (2011): seacarb: seawater carbonate chemistry with R. R package version 2.4. https://cran.r-project.org/package=seacarb

Project(s):

Ocean Acidification International Coordination Centre (OA-ICC)

Coverage:

Median Latitude: 40.734317 * Median Longitude: 13.955777 * South-bound Latitude: 40.728520 * West-bound Longitude: 13.941140 * North-bound Latitude: 40.744460 * East-bound Longitude: 13.963340

Event(s):

Ischia_B1 (ES) * Latitude: 40.729970 * Longitude: 13.963340 * Location: East coast of Ischia, Italia * Method/Device: Sampling by hand (HAND) * Comment: experimental site

Ischia_C (OS) * Latitude: 40.728520 * Longitude: 13.962850 * Location: East coast of Ischia, Italia * Method/Device: Sampling by hand (HAND) * Comment: ocean seawater off Ischia

Ischia_harbour (IP) * Latitude: 40.744460 * Longitude: 13.941140 * Location: East coast of Ischia, Italia * Method/Device: Sampling by hand (HAND) * Comment: Ischia port

Comment:

In order to allow full comparability with other ocean acidification data sets, the R package seacarb (Lavigne and Gattuso, 2011) was used to compute a complete and consistent set of carbonate system variables, as described by Nisumaa et al. (2010). In this dataset the original values were archived in addition with the recalculated parameters (see related PI). The date of carbonate chemistry calculation by seacarb is 2014-04-15.

Parameter(s):

#	Name	Short Name	Unit	Principal Investigator	Method/Device	Comment
1	Event label	Event
2	Species	Species		Hahn, Sabine
3	Table	Tab		Hahn, Sabine
4	Shell length	Shell l	mm	Hahn, Sabine
5	Salinity	Sal
6	Temperature, water	Temp	°C	Hahn, Sabine		late summer to early winter
7	Temperature, water, standard deviation	Temp std dev	±	Hahn, Sabine		late summer to early winter
8	pH	pH		Rodolfo-Metalpa, Riccardo		total scale
9	pH, standard deviation	pH std dev	±	Rodolfo-Metalpa, Riccardo		total scale
10	Partial pressure of carbon dioxide (water) at sea surface temperature (wet air)	pCO2water_SST_wet	µatm	Rodolfo-Metalpa, Riccardo
11	Partial pressure of carbon dioxide, respiration, standard deviation	pCO2 resp std dev	±	Rodolfo-Metalpa, Riccardo
12	Bicarbonate ion	[HCO3]-	µmol/kg	Rodolfo-Metalpa, Riccardo
13	Bicarbonate ion, standard deviation	[HCO3]- std dev	±	Rodolfo-Metalpa, Riccardo
14	Carbonate ion	[CO3]2-	µmol/kg	Rodolfo-Metalpa, Riccardo
15	Carbonate ion, standard deviation	[CO3]2- std dev	±	Rodolfo-Metalpa, Riccardo
16	Carbon dioxide	CO2	µmol/kg	Rodolfo-Metalpa, Riccardo
17	Carbon dioxide, standard deviation	CO2 std dev	±	Rodolfo-Metalpa, Riccardo
18	Carbon, inorganic, dissolved	DIC	µmol/kg	Rodolfo-Metalpa, Riccardo
19	Carbon, inorganic, dissolved, standard deviation	DIC std dev	±	Rodolfo-Metalpa, Riccardo
20	Calcite saturation state	Omega Cal		Rodolfo-Metalpa, Riccardo
21	Calcite saturation state, standard deviation	Omega Cal std dev	±	Rodolfo-Metalpa, Riccardo
22	Aragonite saturation state	Omega Arg		Rodolfo-Metalpa, Riccardo
23	Aragonite saturation state, standard deviation	Omega Arg std dev	±	Rodolfo-Metalpa, Riccardo
24	δ18O, water	δ18O H2O	‰ SMOW	Immenhauser, Adrian		late fall/early winter
25	δ18O, standard deviation	δ18O std dev	±	Immenhauser, Adrian		late fall/early winter
26	δ13C	δ13C	‰ PDB	Immenhauser, Adrian		late fall/early winter
27	δ13C, standard deviation	δ13C std dev	±	Immenhauser, Adrian		late fall/early winter
28	δ18O, minimum	δ18O min	‰	Immenhauser, Adrian		spring
29	δ18O, standard deviation	δ18O std dev	±	Immenhauser, Adrian		spring, minimum
30	δ18O, maximum	δ18O max	‰	Immenhauser, Adrian		spring
31	δ18O, standard deviation	δ18O std dev	±	Immenhauser, Adrian		spring, maximum
32	δ13C	δ13C	‰ PDB	Immenhauser, Adrian		spring
33	δ13C, standard deviation	δ13C std dev	±	Immenhauser, Adrian		spring
34	Layer description	Layer		Hahn, Sabine		of shell Mytilus galloprovinciali
35	Site	Site		Hahn, Sabine
36	Thickness	Thick	mm	Hahn, Sabine		minimum
37	Thickness	Thick	mm	Hahn, Sabine		maximum
38	Sample type	Samp type		Hahn, Sabine
39	δ13C	δ13C	‰ PDB	Hahn, Sabine
40	δ13C, standard deviation	δ13C std dev	±	Hahn, Sabine
41	δ18O, carbonate	δ18O carb	‰ PDB	Hahn, Sabine
42	δ18O, standard deviation	δ18O std dev	±	Hahn, Sabine
43	Distance	Distance	m	Hahn, Sabine
44	Sample code/label	Sample label		Hahn, Sabine
45	Elements	Elements		Hahn, Sabine
46	Percentage	Perc	%	Hahn, Sabine		minimum
47	Percentage	Perc	%	Hahn, Sabine		maximum
48	Percentage	Perc	%	Hahn, Sabine		mean
49	Percentage, standard deviation	Perc std dev	±	Hahn, Sabine
50	Carbonate system computation flag	CSC flag		Yang, Yan	Calculated using seacarb after Nisumaa et al. (2010)
51	Carbon dioxide	CO2	µmol/kg	Yang, Yan	Calculated using seacarb after Nisumaa et al. (2010)
52	Partial pressure of carbon dioxide (water) at sea surface temperature (wet air)	pCO2water_SST_wet	µatm	Yang, Yan	Calculated using seacarb after Nisumaa et al. (2010)
53	Fugacity of carbon dioxide (water) at sea surface temperature (wet air)	fCO2water_SST_wet	µatm	Yang, Yan	Calculated using seacarb after Nisumaa et al. (2010)
54	Bicarbonate ion	[HCO3]-	µmol/kg	Yang, Yan	Calculated using seacarb after Nisumaa et al. (2010)
55	Carbonate ion	[CO3]2-	µmol/kg	Yang, Yan	Calculated using seacarb after Nisumaa et al. (2010)
56	Alkalinity, total	AT	µmol/kg	Yang, Yan	Calculated using seacarb after Nisumaa et al. (2010)
57	Aragonite saturation state	Omega Arg		Yang, Yan	Calculated using seacarb after Nisumaa et al. (2010)
58	Calcite saturation state	Omega Cal		Yang, Yan	Calculated using seacarb after Nisumaa et al. (2010)

License:

Creative Commons Attribution 3.0 Unported (CC-BY-3.0)

Status:

Curation Level: Enhanced curation (CurationLevelC)

Size:

10106 data points

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