Not logged in
PANGAEA.
Data Publisher for Earth & Environmental Science

Krause, Evamaria (2013): Experiment: Study on the effects of near-future ocean acidification on marine yeasts: a microcosm approach [dataset]. PANGAEA, https://doi.org/10.1594/PANGAEA.831668, In supplement to: Krause, Evamaria; Wichels, Antje; Erler, Rene; Gerdts, Gunnar (2013): Study on the effects of near-future ocean acidification on marine yeasts: a microcosm approach. Helgoland Marine Research, 67(4), 607-621, https://doi.org/10.1007/s10152-013-0348-1

Always quote citation above when using data! You can download the citation in several formats below.

RIS CitationBibTeX Citation

Keyword(s):
Candida sake; Coast and continental shelf; Community composition and diversity; Cryptococcus sp.; Cystofilobasidium infirmominiatum; Debaryomyces hansenii; Discosphaerina fagi; Entire community; Guehomyces pullulans; Kondoa malvinella; Laboratory experiment; Leucosporidium scottii; North Atlantic; Pelagos; Ramularia pratensis var. pratensis; Rhodotorula mucilaginosa; Temperate; Tetracladium setigerum
Further details:
Lavigne, Héloïse; Gattuso, Jean-Pierre (2011): seacarb: seawater carbonate chemistry with R. R package version 2.4. https://cran.r-project.org/package=seacarb
Comment:
In order to allow full comparability with other ocean acidification data sets, the R package seacarb (Lavigne and Gattuso, 2011) was used to compute a complete and consistent set of carbonate system variables, as described by Nisumaa et al. (2010). In this dataset the original values were archived in addition with the recalculated parameters (see related PI). The date of carbonate chemistry calculation by seacarb is 2014-02-11.
Parameter(s):
#NameShort NameUnitPrincipal InvestigatorMethod/DeviceComment
SpeciesSpeciesKrause, Evamaria
TreatmentTreatKrause, Evamaria
Incubation durationInc durweeksKrause, Evamaria
Detection leveldlKrause, Evamaria0=not detected, 1=detected
pHpHKrause, EvamariaNBS scale
pH, standard deviationpH std dev±Krause, EvamariaNBS scale
Alkalinity, totalATµmol/kgKrause, Evamaria
Alkalinity, total, standard deviationAT std dev±Krause, Evamaria
Partial pressure of carbon dioxide (water) at sea surface temperature (wet air)pCO2water_SST_wetµatmKrause, Evamaria
10 Partial pressure of carbon dioxide, standard deviationpCO2 std dev±Krause, Evamaria
11 Temperature, waterTemp°CKrause, Evamaria
12 SalinitySalKrause, Evamaria
13 Carbonate system computation flagCSC flagYang, YanCalculated using seacarb after Nisumaa et al. (2010)
14 pHpHYang, YanCalculated using seacarb after Nisumaa et al. (2010)total scale
15 Carbon dioxideCO2µmol/kgYang, YanCalculated using seacarb after Nisumaa et al. (2010)
16 Partial pressure of carbon dioxide (water) at sea surface temperature (wet air)pCO2water_SST_wetµatmYang, YanCalculated using seacarb after Nisumaa et al. (2010)
17 Fugacity of carbon dioxide (water) at sea surface temperature (wet air)fCO2water_SST_wetµatmYang, YanCalculated using seacarb after Nisumaa et al. (2010)
18 Bicarbonate ion[HCO3]-µmol/kgYang, YanCalculated using seacarb after Nisumaa et al. (2010)
19 Carbonate ion[CO3]2-µmol/kgYang, YanCalculated using seacarb after Nisumaa et al. (2010)
20 Carbon, inorganic, dissolvedDICµmol/kgYang, YanCalculated using seacarb after Nisumaa et al. (2010)
21 Aragonite saturation stateOmega ArgYang, YanCalculated using seacarb after Nisumaa et al. (2010)
22 Calcite saturation stateOmega CalYang, YanCalculated using seacarb after Nisumaa et al. (2010)
Status:
Curation Level: Enhanced curation (CurationLevelC)
Size:
2700 data points

Data

Download dataset as tab-delimited text — use the following character encoding:


Species

Treat

Inc dur [weeks]

dl
(0=not detected, 1=detected)

pH
(NBS scale)

pH std dev [±]
(NBS scale)

AT [µmol/kg]

AT std dev [±]

pCO2water_SST_wet [µatm]
10 
pCO2 std dev [±]
11 
Temp [°C]
12 
Sal
13 
CSC flag
14 
pH
(total scale)
15 
CO2 [µmol/kg]
16 
pCO2water_SST_wet [µatm]
17 
fCO2water_SST_wet [µatm]
18 
[HCO3]- [µmol/kg]
19 
[CO3]2- [µmol/kg]
20 
DIC [µmol/kg]
21 
Omega Arg
22 
Omega Cal
1. Candida sake L4 (99)in situ18.102362477730.721267.9924478476211110222371.562.49
2. Debaryomyces hansenii DAOM 2163648 (100)in situ08.102362477730.721267.9924478476211110222371.562.49
3. Discosphaerina fagi (100)in situ18.102362477730.721267.9924478476211110222371.562.49
4. Ramularia pratensis var. pratensis CPC 11294 (95)in situ18.102362477730.721267.9924478476211110222371.562.49
5. Cystofilobasidium infirmominiatum AFTOL-ID 1888 (99)in situ18.102362477730.721267.9924478476211110222371.562.49
6. Cystofilobasidium infirmominiatum AFTOL-ID 1888 (100)in situ18.102362477730.721267.9924478476211110222371.562.49
7. Rhodotorula mucilaginosa S9 (100)in situ08.102362477730.721267.9924478476211110222371.562.49
8. Cryptococcus sp. CRUB 1154 (100)in situ18.102362477730.721267.9924478476211110222371.562.49
9. Cryptococcus sp. CRUB 1154 (98®C99)in situ18.102362477730.721267.9924478476211110222371.562.49
10. Cryptococcus sp. CBS 681.93 AFTOL-ID 719 (100)in situ18.102362477730.721267.9924478476211110222371.562.49
11. Cryptococcus sp. CBS 681.93 AFTOL-ID 719 (99)in situ18.102362477730.721267.9924478476211110222371.562.49
12. Cryptococcus sp. CBS 681.93 AFTOL-ID 719 (98)in situ18.102362477730.721267.9924478476211110222371.562.49
13. Tetracladium setigerum CCM F-10186 (98)in situ18.102362477730.721267.9924478476211110222371.562.49
14. Kondoa malvinella AFTOL-ID 859 (99)in situ18.102362477730.721267.9924478476211110222371.562.49
15. Rhodotorula mucilaginosa S9 (96)in situ08.102362477730.721267.9924478476211110222371.562.49
16. Guehomyces pullulans AFTOL-ID 1958 (100)in situ08.102362477730.721267.9924478476211110222371.562.49
17. Guehomyces pullulans AFTOL-ID 1958 (100)in situ18.102362477730.721267.9924478476211110222371.562.49
18. Leucosporidium scottii AFTOL-ID 718 (100)in situ18.102362477730.721267.9924478476211110222371.562.49
1. Candida sake L4 (99)pH in situ208.120.00236654595730.721268.0123455453210510722341.632.60
2. Debaryomyces hansenii DAOM 2163648 (100)pH in situ208.120.00236654595730.721268.0123455453210510722341.632.60
3. Discosphaerina fagi (100)pH in situ208.120.00236654595730.721268.0123455453210510722341.632.60
4. Ramularia pratensis var. pratensis CPC 11294 (95)pH in situ208.120.00236654595730.721268.0123455453210510722341.632.60
5. Cystofilobasidium infirmominiatum AFTOL-ID 1888 (99)pH in situ208.120.00236654595730.721268.0123455453210510722341.632.60
6. Cystofilobasidium infirmominiatum AFTOL-ID 1888 (100)pH in situ208.120.00236654595730.721268.0123455453210510722341.632.60
7. Rhodotorula mucilaginosa S9 (100)pH in situ208.120.00236654595730.721268.0123455453210510722341.632.60
8. Cryptococcus sp. CRUB 1154 (100)pH in situ208.120.00236654595730.721268.0123455453210510722341.632.60
9. Cryptococcus sp. CRUB 1154 (98®C99)pH in situ208.120.00236654595730.721268.0123455453210510722341.632.60
10. Cryptococcus sp. CBS 681.93 AFTOL-ID 719 (100)pH in situ208.120.00236654595730.721268.0123455453210510722341.632.60
11. Cryptococcus sp. CBS 681.93 AFTOL-ID 719 (99)pH in situ208.120.00236654595730.721268.0123455453210510722341.632.60
12. Cryptococcus sp. CBS 681.93 AFTOL-ID 719 (98)pH in situ208.120.00236654595730.721268.0123455453210510722341.632.60
13. Tetracladium setigerum CCM F-10186 (98)pH in situ208.120.00236654595730.721268.0123455453210510722341.632.60
14. Kondoa malvinella AFTOL-ID 859 (99)pH in situ208.120.00236654595730.721268.0123455453210510722341.632.60
15. Rhodotorula mucilaginosa S9 (96)pH in situ208.120.00236654595730.721268.0123455453210510722341.632.60
16. Guehomyces pullulans AFTOL-ID 1958 (100)pH in situ208.120.00236654595730.721268.0123455453210510722341.632.60
17. Guehomyces pullulans AFTOL-ID 1958 (100)pH in situ208.120.00236654595730.721268.0123455453210510722341.632.60
18. Leucosporidium scottii AFTOL-ID 718 (100)pH in situ218.120.00236654595730.721268.0123455453210510722341.632.60
1. Candida sake L4 (99)pH in situ418.090.0223542149321730.721267.9824489487210910022331.522.43
2. Debaryomyces hansenii DAOM 2163648 (100)pH in situ408.090.0223542149321730.721267.9824489487210910022331.522.43
3. Discosphaerina fagi (100)pH in situ408.090.0223542149321730.721267.9824489487210910022331.522.43
4. Ramularia pratensis var. pratensis CPC 11294 (95)pH in situ408.090.0223542149321730.721267.9824489487210910022331.522.43
5. Cystofilobasidium infirmominiatum AFTOL-ID 1888 (99)pH in situ408.090.0223542149321730.721267.9824489487210910022331.522.43
6. Cystofilobasidium infirmominiatum AFTOL-ID 1888 (100)pH in situ408.090.0223542149321730.721267.9824489487210910022331.522.43
7. Rhodotorula mucilaginosa S9 (100)pH in situ408.090.0223542149321730.721267.9824489487210910022331.522.43
8. Cryptococcus sp. CRUB 1154 (100)pH in situ408.090.0223542149321730.721267.9824489487210910022331.522.43
9. Cryptococcus sp. CRUB 1154 (98®C99)pH in situ408.090.0223542149321730.721267.9824489487210910022331.522.43
10. Cryptococcus sp. CBS 681.93 AFTOL-ID 719 (100)pH in situ408.090.0223542149321730.721267.9824489487210910022331.522.43
11. Cryptococcus sp. CBS 681.93 AFTOL-ID 719 (99)pH in situ408.090.0223542149321730.721267.9824489487210910022331.522.43
12. Cryptococcus sp. CBS 681.93 AFTOL-ID 719 (98)pH in situ408.090.0223542149321730.721267.9824489487210910022331.522.43
13. Tetracladium setigerum CCM F-10186 (98)pH in situ408.090.0223542149321730.721267.9824489487210910022331.522.43
14. Kondoa malvinella AFTOL-ID 859 (99)pH in situ408.090.0223542149321730.721267.9824489487210910022331.522.43
15. Rhodotorula mucilaginosa S9 (96)pH in situ408.090.0223542149321730.721267.9824489487210910022331.522.43
16. Guehomyces pullulans AFTOL-ID 1958 (100)pH in situ418.090.0223542149321730.721267.9824489487210910022331.522.43
17. Guehomyces pullulans AFTOL-ID 1958 (100)pH in situ408.090.0223542149321730.721267.9824489487210910022331.522.43
18. Leucosporidium scottii AFTOL-ID 718 (100)pH in situ408.090.0223542149321730.721267.9824489487210910022331.522.43
1. Candida sake L4 (99)pH 7.81217.810.0122351191935730.721267.704692992621055222040.801.27
2. Debaryomyces hansenii DAOM 2163648 (100)pH 7.81207.810.0122351191935730.721267.704692992621055222040.801.27
3. Discosphaerina fagi (100)pH 7.81207.810.0122351191935730.721267.704692992621055222040.801.27
4. Ramularia pratensis var. pratensis CPC 11294 (95)pH 7.81207.810.0122351191935730.721267.704692992621055222040.801.27
5. Cystofilobasidium infirmominiatum AFTOL-ID 1888 (99)pH 7.81207.810.0122351191935730.721267.704692992621055222040.801.27
6. Cystofilobasidium infirmominiatum AFTOL-ID 1888 (100)pH 7.81207.810.0122351191935730.721267.704692992621055222040.801.27
7. Rhodotorula mucilaginosa S9 (100)pH 7.81207.810.0122351191935730.721267.704692992621055222040.801.27
8. Cryptococcus sp. CRUB 1154 (100)pH 7.81207.810.0122351191935730.721267.704692992621055222040.801.27
9. Cryptococcus sp. CRUB 1154 (98®C99)pH 7.81207.810.0122351191935730.721267.704692992621055222040.801.27
10. Cryptococcus sp. CBS 681.93 AFTOL-ID 719 (100)pH 7.81207.810.0122351191935730.721267.704692992621055222040.801.27
11. Cryptococcus sp. CBS 681.93 AFTOL-ID 719 (99)pH 7.81217.810.0122351191935730.721267.704692992621055222040.801.27
12. Cryptococcus sp. CBS 681.93 AFTOL-ID 719 (98)pH 7.81217.810.0122351191935730.721267.704692992621055222040.801.27
13. Tetracladium setigerum CCM F-10186 (98)pH 7.81207.810.0122351191935730.721267.704692992621055222040.801.27
14. Kondoa malvinella AFTOL-ID 859 (99)pH 7.81207.810.0122351191935730.721267.704692992621055222040.801.27
15. Rhodotorula mucilaginosa S9 (96)pH 7.81217.810.0122351191935730.721267.704692992621055222040.801.27
16. Guehomyces pullulans AFTOL-ID 1958 (100)pH 7.81217.810.0122351191935730.721267.704692992621055222040.801.27
17. Guehomyces pullulans AFTOL-ID 1958 (100)pH 7.81207.810.0122351191935730.721267.704692992621055222040.801.27
18. Leucosporidium scottii AFTOL-ID 718 (100)pH 7.81217.810.0122351191935730.721267.704692992621055222040.801.27
1. Candida sake L4 (99)pH 7.81407.790.0122421297326730.721267.684997997521175022160.771.22
2. Debaryomyces hansenii DAOM 2163648 (100)pH 7.81417.790.0122421297326730.721267.684997997521175022160.771.22
3. Discosphaerina fagi (100)pH 7.81407.790.0122421297326730.721267.684997997521175022160.771.22
4. Ramularia pratensis var. pratensis CPC 11294 (95)pH 7.81407.790.0122421297326730.721267.684997997521175022160.771.22
5. Cystofilobasidium infirmominiatum AFTOL-ID 1888 (99)pH 7.81407.790.0122421297326730.721267.684997997521175022160.771.22
6. Cystofilobasidium infirmominiatum AFTOL-ID 1888 (100)pH 7.81407.790.0122421297326730.721267.684997997521175022160.771.22
7. Rhodotorula mucilaginosa S9 (100)pH 7.81407.790.0122421297326730.721267.684997997521175022160.771.22
8. Cryptococcus sp. CRUB 1154 (100)pH 7.81407.790.0122421297326730.721267.684997997521175022160.771.22
9. Cryptococcus sp. CRUB 1154 (98®C99)pH 7.81407.790.0122421297326730.721267.684997997521175022160.771.22
10. Cryptococcus sp. CBS 681.93 AFTOL-ID 719 (100)pH 7.81407.790.0122421297326730.721267.684997997521175022160.771.22
11. Cryptococcus sp. CBS 681.93 AFTOL-ID 719 (99)pH 7.81407.790.0122421297326730.721267.684997997521175022160.771.22
12. Cryptococcus sp. CBS 681.93 AFTOL-ID 719 (98)pH 7.81407.790.0122421297326730.721267.684997997521175022160.771.22
13. Tetracladium setigerum CCM F-10186 (98)pH 7.81407.790.0122421297326730.721267.684997997521175022160.771.22
14. Kondoa malvinella AFTOL-ID 859 (99)pH 7.81407.790.0122421297326730.721267.684997997521175022160.771.22
15. Rhodotorula mucilaginosa S9 (96)pH 7.81407.790.0122421297326730.721267.684997997521175022160.771.22
16. Guehomyces pullulans AFTOL-ID 1958 (100)pH 7.81407.790.0122421297326730.721267.684997997521175022160.771.22
17. Guehomyces pullulans AFTOL-ID 1958 (100)pH 7.81407.790.0122421297326730.721267.684997997521175022160.771.22
18. Leucosporidium scottii AFTOL-ID 718 (100)pH 7.81407.790.0122421297326730.721267.684997997521175022160.771.22
1. Candida sake L4 (99)pH 7.67207.700.0121932119518730.721267.59591190118520934021920.620.98
2. Debaryomyces hansenii DAOM 2163648 (100)pH 7.67207.700.0121932119518730.721267.59591190118520934021920.620.98
3. Discosphaerina fagi (100)pH 7.67207.700.0121932119518730.721267.59591190118520934021920.620.98
4. Ramularia pratensis var. pratensis CPC 11294 (95)pH 7.67207.700.0121932119518730.721267.59591190118520934021920.620.98
5. Cystofilobasidium infirmominiatum AFTOL-ID 1888 (99)pH 7.67207.700.0121932119518730.721267.59591190118520934021920.620.98
6. Cystofilobasidium infirmominiatum AFTOL-ID 1888 (100)pH 7.67207.700.0121932119518730.721267.59591190118520934021920.620.98
7. Rhodotorula mucilaginosa S9 (100)pH 7.67217.700.0121932119518730.721267.59591190118520934021920.620.98
8. Cryptococcus sp. CRUB 1154 (100)pH 7.67207.700.0121932119518730.721267.59591190118520934021920.620.98
9. Cryptococcus sp. CRUB 1154 (98®C99)pH 7.67207.700.0121932119518730.721267.59591190118520934021920.620.98
10. Cryptococcus sp. CBS 681.93 AFTOL-ID 719 (100)pH 7.67207.700.0121932119518730.721267.59591190118520934021920.620.98
11. Cryptococcus sp. CBS 681.93 AFTOL-ID 719 (99)pH 7.67207.700.0121932119518730.721267.59591190118520934021920.620.98
12. Cryptococcus sp. CBS 681.93 AFTOL-ID 719 (98)pH 7.67207.700.0121932119518730.721267.59591190118520934021920.620.98
13. Tetracladium setigerum CCM F-10186 (98)pH 7.67207.700.0121932119518730.721267.59591190118520934021920.620.98
14. Kondoa malvinella AFTOL-ID 859 (99)pH 7.67207.700.0121932119518730.721267.59591190118520934021920.620.98
15. Rhodotorula mucilaginosa S9 (96)pH 7.67207.700.0121932119518730.721267.59591190118520934021920.620.98
16. Guehomyces pullulans AFTOL-ID 1958 (100)pH 7.67207.700.0121932119518730.721267.59591190118520934021920.620.98
17. Guehomyces pullulans AFTOL-ID 1958 (100)pH 7.67207.700.0121932119518730.721267.59591190118520934021920.620.98
18. Leucosporidium scottii AFTOL-ID 718 (100)pH 7.67217.700.0121932119518730.721267.59591190118520934021920.620.98
1. Candida sake L4 (99)pH 7.67417.690.0122039123643730.721267.58611225122021044022050.610.97
2. Debaryomyces hansenii DAOM 2163648 (100)pH 7.67417.690.0122039123643730.721267.58611225122021044022050.610.97
3. Discosphaerina fagi (100)pH 7.67407.690.0122039123643730.721267.58611225122021044022050.610.97
4. Ramularia pratensis var. pratensis CPC 11294 (95)pH 7.67407.690.0122039123643730.721267.58611225122021044022050.610.97
5. Cystofilobasidium infirmominiatum AFTOL-ID 1888 (99)pH 7.67407.690.0122039123643730.721267.58611225122021044022050.610.97
6. Cystofilobasidium infirmominiatum AFTOL-ID 1888 (100)pH 7.67407.690.0122039123643730.721267.58611225122021044022050.610.97
7. Rhodotorula mucilaginosa S9 (100)pH 7.67417.690.0122039123643730.721267.58611225122021044022050.610.97
8. Cryptococcus sp. CRUB 1154 (100)pH 7.67407.690.0122039123643730.721267.58611225122021044022050.610.97
9. Cryptococcus sp. CRUB 1154 (98®C99)pH 7.67407.690.0122039123643730.721267.58611225122021044022050.610.97
10. Cryptococcus sp. CBS 681.93 AFTOL-ID 719 (100)pH 7.67407.690.0122039123643730.721267.58611225122021044022050.610.97
11. Cryptococcus sp. CBS 681.93 AFTOL-ID 719 (99)pH 7.67417.690.0122039123643730.721267.58611225122021044022050.610.97
12. Cryptococcus sp. CBS 681.93 AFTOL-ID 719 (98)pH 7.67417.690.0122039123643730.721267.58611225122021044022050.610.97
13. Tetracladium setigerum CCM F-10186 (98)pH 7.67407.690.0122039123643730.721267.58611225122021044022050.610.97
14. Kondoa malvinella AFTOL-ID 859 (99)pH 7.67407.690.0122039123643730.721267.58611225122021044022050.610.97
15. Rhodotorula mucilaginosa S9 (96)pH 7.67407.690.0122039123643730.721267.58611225122021044022050.610.97
16. Guehomyces pullulans AFTOL-ID 1958 (100)pH 7.67407.690.0122039123643730.721267.58611225122021044022050.610.97
17. Guehomyces pullulans AFTOL-ID 1958 (100)pH 7.67407.690.0122039123643730.721267.58611225122021044022050.610.97
18. Leucosporidium scottii AFTOL-ID 718 (100)pH 7.67417.690.0122039123643730.721267.58611225122021044022050.610.97