Not logged in
PANGAEA.
Data Publisher for Earth & Environmental Science

Chan, B S Vera; Li, Chaoyi; Lane, Ackley Charles; Wang, Yanchun; Lu, Xingwen; Shih, Kaimin; Zhang, Tong; Thiyagarajan, Vengatesen (2012): CO2-driven ocean acidification alters and weakens integrity of the calcareous tubes produced by the serpulid tubeworm, Hydroides elegans [dataset]. PANGAEA, https://doi.org/10.1594/PANGAEA.831209, Supplement to: Chan, BSV et al. (2012): CO2-Driven Ocean Acidification Alters and Weakens Integrity of the Calcareous Tubes Produced by the Serpulid Tubeworm, Hydroides elegans. PLoS ONE, 7(8), e42718, https://doi.org/10.1371/journal.pone.0042718

Always quote citation above when using data! You can download the citation in several formats below.

RIS CitationBibTeX CitationShow MapGoogle Earth

Abstract:
As a consequence of anthropogenic CO2-driven ocean acidification (OA), coastal waters are becoming increasingly challenging for calcifiers due to reductions in saturation states of calcium carbonate (CaCO3) minerals. The response of calcification rate is one of the most frequently investigated symptoms of OA. However, OA may also result in poor quality calcareous products through impaired calcification processes despite there being no observed change in calcification rate. The mineralogy and ultrastructure of the calcareous products under OA conditions may be altered, resulting in changes to the mechanical properties of calcified structures. Here, the warm water biofouling tubeworm, Hydroides elegans, was reared from larva to early juvenile stage at the aragonite saturation state (Omega A) for the current pCO2 level (ambient) and those predicted for the years 2050, 2100 and 2300. Composition, ultrastructure and mechanical strength of the calcareous tubes produced by those early juvenile tubeworms were examined using X-ray diffraction (XRD), Fourier transform infrared spectroscopy (FT-IR), scanning electron microscopy (SEM) and nanoindentation. Juvenile tubes were composed primarily of the highly soluble CaCO3 mineral form, aragonite. Tubes produced in seawater with aragonite saturation states near or below one had significantly higher proportions of the crystalline precursor, amorphous calcium carbonate (ACC) and the calcite/aragonite ratio dramatically increased. These alterations in tube mineralogy resulted in a holistic deterioration of the tube hardness and elasticity. Thus, in conditions where Omega A is near or below one, the aragonite-producing juvenile tubeworms may no longer be able to maintain the integrity of their calcification products, and may result in reduced survivorship due to the weakened tube protection.
Keyword(s):
Animalia; Annelida; Benthic animals; Benthos; Bottles or small containers/Aquaria (<20 L); Coast and continental shelf; Growth/Morphology; Hydroides elegans; Laboratory experiment; North Pacific; Single species; Tropical
Further details:
Lavigne, Héloïse; Gattuso, Jean-Pierre (2011): seacarb: seawater carbonate chemistry with R. R package version 2.4. https://cran.r-project.org/package=seacarb
Coverage:
Latitude: 22.450000 * Longitude: 114.383330
Date/Time Start: 2011-01-01T00:00:00 * Date/Time End: 2011-03-31T00:00:00
Event(s):
Hong_Kong_OA * Latitude: 22.450000 * Longitude: 114.383330 * Date/Time Start: 2011-01-01T00:00:00 * Date/Time End: 2011-03-31T00:00:00 * Method/Device: Experiment (EXP)
Comment:
In order to allow full comparability with other ocean acidification data sets, the R package seacarb (Lavigne and Gattuso, 2011) was used to compute a complete and consistent set of carbonate system variables, as described by Nisumaa et al. (2010). In this dataset the original values were archived in addition with the recalculated parameters (see related PI). The date of carbonate chemistry calculation by seacarb is 2014-03-24.
Parameter(s):
#NameShort NameUnitPrincipal InvestigatorMethod/DeviceComment
SpeciesSpeciesChan, B S Vera
TreatmentTreatThiyagarajan, Vengatesen
pHpHThiyagarajan, VengatesenPotentiometricday 5, NBS scale
Temperature, waterTemp°CThiyagarajan, Vengatesenday 5
SalinitySalThiyagarajan, Vengatesenday 5
Alkalinity, totalATµmol/kgThiyagarajan, VengatesenPotentiometric titrationday 5
Partial pressure of carbon dioxide (water) at sea surface temperature (wet air)pCO2water_SST_wetµatmThiyagarajan, VengatesenCalculated using CO2SYSday 5
Aragonite saturation stateOmega ArgThiyagarajan, VengatesenCalculated using CO2SYSday 5
pHpHThiyagarajan, VengatesenPotentiometricday 7, NBS scale
10 Temperature, waterTemp°CThiyagarajan, Vengatesenday 7
11 SalinitySalThiyagarajan, Vengatesenday 7
12 Alkalinity, totalATµmol/kgThiyagarajan, VengatesenPotentiometric titrationday 7
13 Partial pressure of carbon dioxide (water) at sea surface temperature (wet air)pCO2water_SST_wetµatmThiyagarajan, VengatesenCalculated using CO2SYSday 7
14 Aragonite saturation stateOmega ArgThiyagarajan, VengatesenCalculated using CO2SYSday 7
15 Calcite/Aragonite ratioCal/ArgThiyagarajan, Vengatesen
16 Magnesium/Calcium ratioMg/Cammol/molThiyagarajan, Vengatesen
17 RatioRatioThiyagarajan, VengatesenFTIR peak
18 HardnessHardnessGPaThiyagarajan, Vengatesen
19 ElasticityElasticityGPaThiyagarajan, Vengatesen
20 Carbonate system computation flagCSC flagYang, YanCalculated using seacarb after Nisumaa et al. (2010)
21 pHpHYang, YanCalculated using seacarb after Nisumaa et al. (2010)day 5, total scale
22 Carbon dioxideCO2µmol/kgYang, YanCalculated using seacarb after Nisumaa et al. (2010)day 5
23 Partial pressure of carbon dioxide (water) at sea surface temperature (wet air)pCO2water_SST_wetµatmYang, YanCalculated using seacarb after Nisumaa et al. (2010)day 5
24 Fugacity of carbon dioxide (water) at sea surface temperature (wet air)fCO2water_SST_wetµatmYang, YanCalculated using seacarb after Nisumaa et al. (2010)day 5
25 Bicarbonate ion[HCO3]-µmol/kgYang, YanCalculated using seacarb after Nisumaa et al. (2010)day 5
26 Carbonate ion[CO3]2-µmol/kgYang, YanCalculated using seacarb after Nisumaa et al. (2010)day 5
27 Carbon, inorganic, dissolvedDICµmol/kgYang, YanCalculated using seacarb after Nisumaa et al. (2010)day 5
28 Aragonite saturation stateOmega ArgYang, YanCalculated using seacarb after Nisumaa et al. (2010)day 5
29 Calcite saturation stateOmega CalYang, YanCalculated using seacarb after Nisumaa et al. (2010)day 5
30 pHpHYang, YanCalculated using seacarb after Nisumaa et al. (2010)day 7, total scale
31 Carbon dioxideCO2µmol/kgYang, YanCalculated using seacarb after Nisumaa et al. (2010)day 7
32 Partial pressure of carbon dioxide (water) at sea surface temperature (wet air)pCO2water_SST_wetµatmYang, YanCalculated using seacarb after Nisumaa et al. (2010)day 7
33 Fugacity of carbon dioxide (water) at sea surface temperature (wet air)fCO2water_SST_wetµatmYang, YanCalculated using seacarb after Nisumaa et al. (2010)day 7
34 Bicarbonate ion[HCO3]-µmol/kgYang, YanCalculated using seacarb after Nisumaa et al. (2010)day 7
35 Carbonate ion[CO3]2-µmol/kgYang, YanCalculated using seacarb after Nisumaa et al. (2010)day 7
36 Carbon, inorganic, dissolvedDICµmol/kgYang, YanCalculated using seacarb after Nisumaa et al. (2010)day 7
37 Aragonite saturation stateOmega ArgYang, YanCalculated using seacarb after Nisumaa et al. (2010)day 7
38 Calcite saturation stateOmega CalYang, YanCalculated using seacarb after Nisumaa et al. (2010)day 7
Status:
Curation Level: Enhanced curation (CurationLevelC)
Size:
741 data points

Data

Download dataset as tab-delimited text — use the following character encoding:


Species

Treat

pH
(day 5, NBS scale, Potentiometric)

Temp [°C]
(day 5)

Sal
(day 5)

AT [µmol/kg]
(day 5, Potentiometric titration)

pCO2water_SST_wet [µatm]
(day 5, Calculated using CO2SYS)

Omega Arg
(day 5, Calculated using CO2SYS)

pH
(day 7, NBS scale, Potentiometric)
10 
Temp [°C]
(day 7)
11 
Sal
(day 7)
12 
AT [µmol/kg]
(day 7, Potentiometric titration)
13 
pCO2water_SST_wet [µatm]
(day 7, Calculated using CO2SYS)
14 
Omega Arg
(day 7, Calculated using CO2SYS)
15 
Cal/Arg
16 
Mg/Ca [mmol/mol]
17 
Ratio
(FTIR peak)
18 
Hardness [GPa]
19 
Elasticity [GPa]
20 
CSC flag
(Calculated using seacarb afte...)
21 
pH
(day 5, total scale, Calculate...)
22 
CO2 [µmol/kg]
(day 5, Calculated using seaca...)
23 
pCO2water_SST_wet [µatm]
(day 5, Calculated using seaca...)
24 
fCO2water_SST_wet [µatm]
(day 5, Calculated using seaca...)
25 
[HCO3]- [µmol/kg]
(day 5, Calculated using seaca...)
26 
[CO3]2- [µmol/kg]
(day 5, Calculated using seaca...)
27 
DIC [µmol/kg]
(day 5, Calculated using seaca...)
28 
Omega Arg
(day 5, Calculated using seaca...)
29 
Omega Cal
(day 5, Calculated using seaca...)
30 
pH
(day 7, total scale, Calculate...)
31 
CO2 [µmol/kg]
(day 7, Calculated using seaca...)
32 
pCO2water_SST_wet [µatm]
(day 7, Calculated using seaca...)
33 
fCO2water_SST_wet [µatm]
(day 7, Calculated using seaca...)
34 
[HCO3]- [µmol/kg]
(day 7, Calculated using seaca...)
35 
[CO3]2- [µmol/kg]
(day 7, Calculated using seaca...)
36 
DIC [µmol/kg]
(day 7, Calculated using seaca...)
37 
Omega Arg
(day 7, Calculated using seaca...)
38 
Omega Cal
(day 7, Calculated using seaca...)
Hydroides elegans (annelid)Control8.1625.536.02367.352966435.97075373.3926646558.0825.535.02250.103844522.44963972.7461028840.0066753250.1239373882.77916234044.6333333302.788333333268.0212432430183321820633.445.217.9414517516181817520082.794.22
Hydroides elegans (annelid)Control8.1724.936.02404.895802429.95664683.4517351708.0625.235.52271.923614553.55665742.6655537260.0069390590.0680388933.051513740268.0412425424186122220953.505.317.9215548546185017120372.714.10
Hydroides elegans (annelid)Control8.1324.935.52330.930757468.24831673.0891954048.0625.235.02238.248114548.01839502.6072316000.0114816950.0819430692.38054213138.6050000002.363333333267.9913463462184419820553.144.757.9215542541182716720092.654.01
Hydroides elegans (annelid)Control8.1525.435.02367.204225453.52767833.2823083368.0825.335.02306.208152535.48647572.8004519180.0088486650.0420199633.10269552040.9966666702.280000000268.0113449447185521020773.335.057.9415530528186717920612.844.31
Hydroides elegans (annelid)Control8.1625.534.52358.694850442.11681593.3186926288.0825.434.52238.882419522.39166192.7059613410.0069685710.0806267042.78444084335.5300000001.992222222268.0212437436184321120673.375.117.9415517515181417220012.754.17
Hydroides elegans (annelid)CO2 treatment#18.0024.836.02352.149675669.86166022.4520113877.9325.336.02301.568145791.16751072.1241816060.0119625940.1144510042.61900381134.8700000002.198333333267.8719663661196415821412.493.777.7922784782196513721242.163.27
Hydroides elegans (annelid)CO2 treatment#17.8625.535.02360.211487984.94339091.8796787897.9225.435.02283.918825814.09433922.0429150780.0056265160.030188611267.7227976973206712022151.912.897.7823806804196313121162.083.15
Hydroides elegans (annelid)CO2 treatment#17.9625.534.52334.856622753.58308482.2519624187.9125.434.52249.944906826.85405591.9577363850.0108772570.1495543632.86757624443.8316666702.848333333267.8221746744198514321492.293.477.7723819817194312520911.993.02
Hydroides elegans (annelid)CO2 treatment#17.9325.534.52290.849442799.77941902.0816141017.8925.635.02266.451169874.66605211.9213755410.0054633810.0685281722.580234231267.7922792790196613321212.113.217.7524867864196512321121.952.96
Hydroides elegans (annelid)CO2 treatment#17.9125.734.52321.597474855.43057922.0409223437.8925.735.02263.177112873.91142801.9245794650.0065123300.0343516972.34704038431.9112500002.030000000267.7724848845200413021582.073.147.7524866864196112321081.962.96
Hydroides elegans (annelid)CO2 treatment#27.7625.537.02445.9154821297.25346801.6384837607.6925.536.52311.3869891467.52934501.3269221080.0349742270.0974613133.94640621126.5700000001.646666667267.623612881284218710623291.662.517.55401457145221018622271.352.04
Hydroides elegans (annelid)CO2 treatment#27.7424.837.02451.5271951360.96079701.5411143027.5925.236.02279.3762871858.41592901.0398895720.0160552790.1842706403.39461151238.7687500002.411250000267.613813501346220710023461.562.377.45521844183821146722331.061.60
Hydroides elegans (annelid)CO2 treatment#27.4824.936.02434.2950562593.45727800.8679443877.6325.235.52311.1578521713.68347701.1390845770.0391906220.2150073143.840829274267.34732573256522985624270.881.347.49481700169421327322531.161.75
Hydroides elegans (annelid)CO2 treatment#27.5425.535.02326.4229142166.56834000.9472067037.5025.435.02300.5139492359.91471100.8559962980.0131720270.0819007384.15359914412.7216666700.590473333267.40602150214321786122990.961.467.36662341233421665522870.871.32
Hydroides elegans (annelid)CO2 treatment#27.4325.536.02410.5036092913.90947900.7862481467.4525.136.02292.4811422629.79391300.7703498250.0197018210.1717813623.850552216267.29802893288422875124180.801.217.31732610260221705022930.781.19
Hydroides elegans (annelid)CO2 treatment#37.5024.936.02413.1074382448.57279700.8985160127.3825.235.02261.9495623095.98252200.6429585490.0179280430.1189718354.3517241386.8783333330.195236667267.36692429242222725823980.911.387.24873072306321614122890.650.99
Hydroides elegans (annelid)CO2 treatment#37.4525.435.52433.5103972810.23536000.8194889227.4125.335.02343.9230762988.18182000.7143098400.0379955780.1976827093.312297735267.31782789278123065324360.831.267.27832965295622324623610.731.10
Hydroides elegans (annelid)CO2 treatment#37.5025.435.02417.7269812481.44792600.9000792407.4325.435.02309.6447792807.81273600.7378086090.0424943950.2242690903.76036866423.5033333301.117778333267.36692462245422785824050.921.397.29782786277821944723200.751.14
Hydroides elegans (annelid)CO2 treatment#37.3525.835.02424.8788953587.89604100.6588818547.4725.635.02308.6403412551.85628300.8102633570.0369590693.952826352267.21993563355223234224640.671.017.33712533252521825223040.821.25
Hydroides elegans (annelid)CO2 treatment#37.3225.635.02408.9124753822.75435700.6083400087.3825.535.02309.1460683169.52761400.6632341960.0098909870.131507453267.181063796378423153924590.620.947.24883146313622054223360.671.02