Citation:

PANGAEA.831181

Name: Seawater carbonate chemistry, respiration, routine metabolic rate, extracellular pH, intracellular pH of the Antarctic fish Notothenia rossii in a laboratory experiment
Published: 2012
License: https://creativecommons.org/licenses/by/3.0/
Keywords: Acid-base regulation; Animalia; Antarctic; Chordata; Coast and continental shelf; Containers and aquaria (20-1000 L or < 1 m**2); Growth/Morphology; Laboratory experiment; Nekton; Notothenia rossii; Pelagos; Polar; Respiration; Single species; Temperature

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Keyword(s):

Acid-base regulation; Animalia; Antarctic; Chordata; Coast and continental shelf; Containers and aquaria (20-1000 L or < 1 m**2); Growth/Morphology; Laboratory experiment; Nekton; Notothenia rossii; Pelagos; Polar; Respiration; Single species; Temperature

Related to:

Strobel, Anneli; Bennecke, Swaantje; Leo, Elettra; Mintenbeck, Katja; Pörtner, Hans-Otto; Mark, Felix Christopher (2012): Metabolic shifts in the Antarctic fish Notothenia rossii in response to rising temperature and PCO2. Frontiers in Zoology, 9(1), 28, https://doi.org/10.1186/1742-9994-9-28

Original version:

Strobel, Anneli; Bennecke, Swaantje; Leo, Elettra; Mintenbeck, Katja; Pörtner, Hans-Otto; Mark, Felix Christopher (2014): Experiment: Metabolic shifts in the Antarctic fish Notothenia rossii in response to rising temperature and PCO2. PANGAEA, https://doi.org/10.1594/PANGAEA.829830

Further details:

Lavigne, Héloïse; Gattuso, Jean-Pierre (2011): seacarb: seawater carbonate chemistry with R. R package version 2.4. https://cran.r-project.org/package=seacarb

Project(s):

Ocean Acidification International Coordination Centre (OA-ICC)

Coverage:

Latitude: -62.233330 * Longitude: -58.666660

Minimum Elevation: -35.0 m * Maximum Elevation: -35.0 m

Event(s):

PotterCove * Latitude: -62.233330 * Longitude: -58.666660 * Elevation: -35.0 m * Location: Potter Cove, King George Island, Antarctic Peninsula * Campaign: * Basis: Carlini/Jubany Station * Method/Device: Multiple investigations (MULT)

Comment:

In order to allow full comparability with other ocean acidification data sets, the R package seacarb (Lavigne and Gattuso, 2011) was used to compute a complete and consistent set of carbonate system variables, as described by Nisumaa et al. (2010). In this dataset the original values were archived in addition with the recalculated parameters (see related PI). The date of carbonate chemistry calculation by seacarb is 2014-03-24.

Parameter(s):

#	Name	Short Name	Unit	Principal Investigator	Method/Device	Comment
1	Species	Species		Strobel, Anneli
2	Temperature, water	Temp	°C	Strobel, Anneli		treatment
3	Partial pressure of carbon dioxide (water) at sea surface temperature (wet air)	pCO2water_SST_wet	ppmv	Strobel, Anneli		treatment
4	Length, total	TL	mm	Strobel, Anneli
5	Length, standard	I std	mm	Strobel, Anneli
6	Wet mass	Wet m	g	Strobel, Anneli
7	Gender	Gender		Strobel, Anneli
8	Hepatosomatic index	HSI		Strobel, Anneli
9	Condition factor	CF		Strobel, Anneli
10	Haematocrit	Ht	%	Strobel, Anneli
11	Lactate	Lactate	µmol/l	Strobel, Anneli
12	Osmotic concentration	Osmolarity	mOsmol/l	Strobel, Anneli
13	pH, extracellular	pHe		Strobel, Anneli
14	pH, intracellular	pH in		Strobel, Anneli		liver
15	pH, intracellular	pH in		Strobel, Anneli		white muscle
16	Respiration rate, oxygen	Resp O2	µmol/g/h	Strobel, Anneli		whole animal respiration
17	pH	pH		Strobel, Anneli	Potentiometric	NBS scale
18	pH, standard deviation	pH std dev	±	Strobel, Anneli	Potentiometric	NBS scale
19	Partial pressure of carbon dioxide (water) at sea surface temperature (wet air)	pCO2water_SST_wet	µatm	Strobel, Anneli	Calculated using CO2SYS
20	Partial pressure of carbon dioxide, standard deviation	pCO2 std dev	±	Strobel, Anneli	Calculated using CO2SYS
21	Carbon, inorganic, dissolved	DIC	µmol/kg	Strobel, Anneli
22	Carbon, inorganic, dissolved, standard deviation	DIC std dev	±	Strobel, Anneli
23	Bicarbonate ion	[HCO3]-	µmol/kg	Strobel, Anneli	Calculated using CO2SYS
24	Bicarbonate ion, standard deviation	[HCO3]- std dev	±	Strobel, Anneli	Calculated using CO2SYS
25	Temperature, water	Temp	°C	Strobel, Anneli
26	Temperature, water, standard deviation	Temp std dev	±	Strobel, Anneli
27	Salinity	Sal		Strobel, Anneli
28	Salinity, standard deviation	Sal std dev	±	Strobel, Anneli
29	Carbonate system computation flag	CSC flag		Yang, Yan	Calculated using seacarb after Nisumaa et al. (2010)
30	pH	pH		Yang, Yan	Calculated using seacarb after Nisumaa et al. (2010)	total scale
31	Carbon dioxide	CO2	µmol/kg	Yang, Yan	Calculated using seacarb after Nisumaa et al. (2010)
32	Partial pressure of carbon dioxide (water) at sea surface temperature (wet air)	pCO2water_SST_wet	µatm	Yang, Yan	Calculated using seacarb after Nisumaa et al. (2010)
33	Fugacity of carbon dioxide (water) at sea surface temperature (wet air)	fCO2water_SST_wet	µatm	Yang, Yan	Calculated using seacarb after Nisumaa et al. (2010)
34	Bicarbonate ion	[HCO3]-	µmol/kg	Yang, Yan	Calculated using seacarb after Nisumaa et al. (2010)
35	Carbonate ion	[CO3]2-	µmol/kg	Yang, Yan	Calculated using seacarb after Nisumaa et al. (2010)
36	Alkalinity, total	AT	µmol/kg	Yang, Yan	Calculated using seacarb after Nisumaa et al. (2010)
37	Aragonite saturation state	Omega Arg		Yang, Yan	Calculated using seacarb after Nisumaa et al. (2010)
38	Calcite saturation state	Omega Cal		Yang, Yan	Calculated using seacarb after Nisumaa et al. (2010)

License:

Creative Commons Attribution 3.0 Unported (CC-BY-3.0)

Status:

Curation Level: Enhanced curation (CurationLevelC)

Size:

1116 data points

Data

Download dataset as tab-delimited text — use the following character encoding:

1 Species	2 Temp [°C] (treatment)	3 pCO2water_SST_wet [ppmv] (treatment)	4 TL [mm]	5 I std [mm]	6 Wet m [g]	7 Gender	8 HSI	9 CF	10 Ht [%]	11 Lactate [µmol/l]	12 Osmolarity [mOsmol/l]	13 pHe	14 pH in (liver)	15 pH in (white muscle)	16 Resp O2 [µmol/g/h] (whole animal respiration)	17 pH (NBS scale, Potentiometric)	18 pH std dev [±] (NBS scale, Potentiometric)	19 pCO2water_SST_wet [µatm] (Calculated using CO2SYS)	20 pCO2 std dev [±] (Calculated using CO2SYS)	21 DIC [µmol/kg]	22 DIC std dev [±]	23 [HCO3]- [µmol/kg] (Calculated using CO2SYS)	24 [HCO3]- std dev [±] (Calculated using CO2SYS)	25 Temp [°C]	26 Temp std dev [±]	27 Sal	28 Sal std dev [±]	29 CSC flag (Calculated using seacarb afte...)	30 pH (total scale, Calculated using...)	31 CO2 [µmol/kg] (Calculated using seacarb afte...)	32 pCO2water_SST_wet [µatm] (Calculated using seacarb afte...)	33 fCO2water_SST_wet [µatm] (Calculated using seacarb afte...)	34 [HCO3]- [µmol/kg] (Calculated using seacarb afte...)	35 [CO3]2- [µmol/kg] (Calculated using seacarb afte...)	36 AT [µmol/kg] (Calculated using seacarb afte...)	37 Omega Arg (Calculated using seacarb afte...)	38 Omega Cal (Calculated using seacarb afte...)
Notothenia rossii (fish)	1	390	250	214	155	male	1.3	1.6	22	<800	450.0				1.47	8.250	0.015	356.72	18.26	2595.00	118.66	2429.78	110.06	1.45	0.090	32.47	0.35	27	8.16	22	360	359	2431	142	2775	2.16	3.45
Notothenia rossii (fish)	1	390	291	258	297	female	1.2	1.7	26	1200	419.5	7.540	7.109	7.260	1.79	8.250	0.015	356.72	18.26	2595.00	118.66	2429.78	110.06	1.45	0.090	32.47	0.35	27	8.16	22	360	359	2431	142	2775	2.16	3.45
Notothenia rossii (fish)	1	390	379	338	660	female	1.7	1.7	35	<800	465.5	7.350	7.053	7.260	0.65	8.250	0.015	356.72	18.26	2595.00	118.66	2429.78	110.06	1.45	0.090	32.47	0.35	27	8.16	22	360	359	2431	142	2775	2.16	3.45
Notothenia rossii (fish)	1	390	331	294	418	female	1.8	1.6	25	<800	426.5		7.081	7.391	1.23	8.250	0.015	356.72	18.26	2595.00	118.66	2429.78	110.06	1.45	0.090	32.47	0.35	27	8.16	22	360	359	2431	142	2775	2.16	3.45
Notothenia rossii (fish)	1	390	390	355	804	female	3.1	1.8	25	<800	429.5				1.69	8.250	0.015	356.72	18.26	2595.00	118.66	2429.78	110.06	1.45	0.090	32.47	0.35	27	8.16	22	360	359	2431	142	2775	2.16	3.45
Notothenia rossii (fish)	1	390	394	355	757	female	3.5	1.7	35	<800	453.0	7.423				8.250	0.015	356.72	18.26	2595.00	118.66	2429.78	110.06	1.45	0.090	32.47	0.35	27	8.16	22	360	359	2431	142	2775	2.16	3.45
Notothenia rossii (fish)	7	390	245	212	159	female	0.8	1.7	22	<800	400.0	7.456		7.366	2.28	7.914	0.016	461.43	13.69	1942.50	26.39	1839.93	26.00	7.25	0.070	32.75	0.21	27	7.81	31	634	631	1849	62	2009	0.95	1.50
Notothenia rossii (fish)	7	390	280	251	229	male	0.9	1.4	28	<800	389.5	7.395		7.236	1.99	7.914	0.016	461.43	13.69	1942.50	26.39	1839.93	26.00	7.25	0.070	32.75	0.21	27	7.81	31	634	631	1849	62	2009	0.95	1.50
Notothenia rossii (fish)	7	390	293	261	275	female	1.0	1.5	27	<800	400.0	7.401	6.891	7.275	2.54	7.914	0.016	461.43	13.69	1942.50	26.39	1839.93	26.00	7.25	0.070	32.75	0.21	27	7.81	31	634	631	1849	62	2009	0.95	1.50
Notothenia rossii (fish)	7	390	339	303	412	female	0.9	1.5	29	<800	358.0	7.524		7.151		7.914	0.016	461.43	13.69	1942.50	26.39	1839.93	26.00	7.25	0.070	32.75	0.21	27	7.81	31	634	631	1849	62	2009	0.95	1.50
Notothenia rossii (fish)	7	390	236	206	151	male	0.9	1.7	28	<800	400.0	7.251		7.185		7.914	0.016	461.43	13.69	1942.50	26.39	1839.93	26.00	7.25	0.070	32.75	0.21	27	7.81	31	634	631	1849	62	2009	0.95	1.50
Notothenia rossii (fish)	7	1960	287	254	246	female	0.5	1.5	32	<800	402.5	7.504	7.004	7.335	2.83	7.493	0.006	2018.55	26.93	2369.44	2.04	2241.68	1.06	6.88	0.063	32.63	0.26	27	7.39	99	2018	2010	2242	28	2312	0.43	0.68
Notothenia rossii (fish)	7	1960	245	214	152	female	1.3	1.6	23	<800	422.0	7.574	6.780	7.411	2.13	7.493	0.006	2018.55	26.93	2369.44	2.04	2241.68	1.06	6.88	0.063	32.63	0.26	27	7.39	99	2018	2010	2242	28	2312	0.43	0.68
Notothenia rossii (fish)	7	1960	255	226	164	female	0.8	1.4	28	<800	400.0	7.605		7.085	1.95	7.493	0.006	2018.55	26.93	2369.44	2.04	2241.68	1.06	6.88	0.063	32.63	0.26	27	7.39	99	2018	2010	2242	28	2312	0.43	0.68
Notothenia rossii (fish)	7	1960	318	280	343	male	0.9	1.6	36	<800	400.0	7.606	7.028	7.405	3.13	7.493	0.006	2018.55	26.93	2369.44	2.04	2241.68	1.06	6.88	0.063	32.63	0.26	27	7.39	99	2018	2010	2242	28	2312	0.43	0.68
Notothenia rossii (fish)	7	1960	264	234	206	male	0.8	1.6	28	<800	399.3	7.501	7.024	7.296	3.13	7.493	0.006	2018.55	26.93	2369.44	2.04	2241.68	1.06	6.88	0.063	32.63	0.26	27	7.39	99	2018	2010	2242	28	2312	0.43	0.68
Notothenia rossii (fish)	7	1960	355	313	504	male	0.7	1.6	36	<800	417.3	7.514	6.795	7.153	3.13	7.493	0.006	2018.55	26.93	2369.44	2.04	2241.68	1.06	6.88	0.063	32.63	0.26	27	7.39	99	2018	2010	2242	28	2312	0.43	0.68
Notothenia rossii (fish)	7	1960	238	214	137	male	0.7	1.4	30	<800	386.0	7.885		7.477	3.13	7.493	0.006	2018.55	26.93	2369.44	2.04	2241.68	1.06	6.88	0.063	32.63	0.26	27	7.39	99	2018	2010	2242	28	2312	0.43	0.68
Notothenia rossii (fish)	7	1960	321	283	345	male	0.9	1.5	35	<800	360.5	7.540	6.939	7.269	3.13	7.493	0.006	2018.55	26.93	2369.44	2.04	2241.68	1.06	6.88	0.063	32.63	0.26	27	7.39	99	2018	2010	2242	28	2312	0.43	0.68
Notothenia rossii (fish)	7	1960	283	252	222	male	0.9	1.4	36	<800	359.0	7.514	6.874	7.397	3.13	7.493	0.006	2018.55	26.93	2369.44	2.04	2241.68	1.06	6.88	0.063	32.63	0.26	27	7.39	99	2018	2010	2242	28	2312	0.43	0.68
Notothenia rossii (fish)	7	1960	256	227	164	female	0.8	1.4	25	<800	373.5	7.499		7.228	3.13	7.493	0.006	2018.55	26.93	2369.44	2.04	2241.68	1.06	6.88	0.063	32.63	0.26	27	7.39	99	2018	2010	2242	28	2312	0.43	0.68
Notothenia rossii (fish)	1	1960	280	250	277	female	2.1	1.8	26	<800	355.0	7.600	7.052	7.331	1.38	7.455	0.018	2179.04	54.50	2401.81	5.58	2254.02	3.54	1.36	0.170	32.77	0.29	27	7.36	125	2068	2059	2256	21	2310	0.32	0.52
Notothenia rossii (fish)	1	1960	318	284	342	female	1.1	1.5	26	<800	428.0	7.511	7.312	7.333	1.51	7.455	0.018	2179.04	54.50	2401.81	5.58	2254.02	3.54	1.36	0.170	32.77	0.29	27	7.36	125	2068	2059	2256	21	2310	0.32	0.52
Notothenia rossii (fish)	1	1960	240	213	144	male	1.1	1.5	24	<800	433.5	7.494	6.865	7.419	1.76	7.455	0.018	2179.04	54.50	2401.81	5.58	2254.02	3.54	1.36	0.170	32.77	0.29	27	7.36	125	2068	2059	2256	21	2310	0.32	0.52
Notothenia rossii (fish)	1	1960	361	322	510	female	1.1	1.5	30	1200	396.3	7.493	6.971	7.359	0.99	7.455	0.018	2179.04	54.50	2401.81	5.58	2254.02	3.54	1.36	0.170	32.77	0.29	27	7.36	125	2068	2059	2256	21	2310	0.32	0.52
Notothenia rossii (fish)	1	1960	301	266	317	female	1.1	1.7	32	1400	428.3	7.419	6.952	7.474	1.74	7.455	0.018	2179.04	54.50	2401.81	5.58	2254.02	3.54	1.36	0.170	32.77	0.29	27	7.36	125	2068	2059	2256	21	2310	0.32	0.52
Notothenia rossii (fish)	1	1960	263	233	196	female	1.0	1.5	32	1000	351.5	7.492	6.982	7.353	1.55	7.455	0.018	2179.04	54.50	2401.81	5.58	2254.02	3.54	1.36	0.170	32.77	0.29	27	7.36	125	2068	2059	2256	21	2310	0.32	0.52
Notothenia rossii (fish)	1	1960	268	236	210	male	1.0	1.6	30	<800	380.0	7.671		7.135		7.455	0.018	2179.04	54.50	2401.81	5.58	2254.02	3.54	1.36	0.170	32.77	0.29	27	7.36	125	2068	2059	2256	21	2310	0.32	0.52
Notothenia rossii (fish)	1	1960	238	211	153	male	1.4	1.6	36	900	467.5	7.395	6.966	7.423		7.455	0.018	2179.04	54.50	2401.81	5.58	2254.02	3.54	1.36	0.170	32.77	0.29	27	7.36	125	2068	2059	2256	21	2310	0.32	0.52
Notothenia rossii (fish)	1	1960	309	274	319	female	1.0	1.6	26	<800	365.0	7.493		7.474		7.455	0.018	2179.04	54.50	2401.81	5.58	2254.02	3.54	1.36	0.170	32.77	0.29	27	7.36	125	2068	2059	2256	21	2310	0.32	0.52