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Asnaghi, Valentina; Chiantore, Mariachiara; Mangialajo, Luisa; Gazeau, Frédéric; Francour, Patrice; Alliouane, Samir; Gattuso, Jean-Pierre (2013): Cascading Effects of Ocean Acidification in a Rocky Subtidal Community [dataset]. PANGAEA, https://doi.org/10.1594/PANGAEA.830737

Always quote citation above when using data! You can download the citation in several formats below.

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Keyword(s):
Benthos; Coast and continental shelf; Containers and aquaria (20-1000 L or < 1 m**2); Corallina elongata; Cystoseira amentacea; Dictyota dichotoma; Entire community; Growth/Morphology; Laboratory experiment; Mediterranean Sea; Rocky-shore community; Temperate
Related to:
Original version:
Asnaghi, Valentina; Chiantore, Mariachiara; Mangialajo, Luisa; Gazeau, Frédéric; Francour, Patrice; Alliouane, Samir; Gattuso, Jean-Pierre (2013): Effects of ocean acidification on the growth of calcifying and non-calcifying algae and on jaw/test ratio and test robustness of sea urchins fed the different algae. PANGAEA, https://doi.org/10.1594/PANGAEA.818626
Further details:
Lavigne, Héloïse; Gattuso, Jean-Pierre (2011): seacarb: seawater carbonate chemistry with R. R package version 2.4. https://cran.r-project.org/package=seacarb
Comment:
In order to allow full comparability with other ocean acidification data sets, the R package seacarb (Lavigne and Gattuso, 2011) was used to compute a complete and consistent set of carbonate system variables, as described by Nisumaa et al. (2010). In this dataset the original values were archived in addition with the recalculated parameters (see related PI). The date of carbonate chemistry calculation by seacarb is 2014-03-17.
Parameter(s):
#NameShort NameUnitPrincipal InvestigatorMethod/DeviceComment
Aquarium numberAquariumAsnaghi, Valentina
Partial pressure of carbon dioxide (water) at sea surface temperature (wet air)pCO2water_SST_wetµatmAsnaghi, Valentina
Sea urchinSea urchinAsnaghi, Valentinapresents = y, abstents = n
SpeciesSpeciesAsnaghi, Valentina
ReplicateReplAsnaghi, Valentina
Weight lossLoss%Asnaghi, Valentina
Aristotle's lantern length/test diameter ratiojaw/test ratioAsnaghi, Valentina
Test robustnessrobustnessg/cmAsnaghi, Valentina
SalinitySalAsnaghi, Valentina
10 pHpHAsnaghi, ValentinaPotentiometrictotal scale
11 pH, standard deviationpH std dev±Asnaghi, ValentinaPotentiometrictotal scale
12 Alkalinity, totalATµmol/kgAsnaghi, ValentinaPotentiometric titration
13 Alkalinity, total, standard deviationAT std dev±Asnaghi, ValentinaPotentiometric titration
14 Temperature, waterTemp°CAsnaghi, ValentinaCalculated using seacarb
15 Temperature, water, standard deviationTemp std dev±Asnaghi, ValentinaCalculated using seacarb
16 Carbonate system computation flagCSC flagYang, YanCalculated using seacarb after Nisumaa et al. (2010)
17 Carbon dioxideCO2µmol/kgYang, YanCalculated using seacarb after Nisumaa et al. (2010)
18 Partial pressure of carbon dioxide (water) at sea surface temperature (wet air)pCO2water_SST_wetµatmYang, YanCalculated using seacarb after Nisumaa et al. (2010)
19 Fugacity of carbon dioxide (water) at sea surface temperature (wet air)fCO2water_SST_wetµatmYang, YanCalculated using seacarb after Nisumaa et al. (2010)
20 Bicarbonate ion[HCO3]-µmol/kgYang, YanCalculated using seacarb after Nisumaa et al. (2010)
21 Carbonate ion[CO3]2-µmol/kgYang, YanCalculated using seacarb after Nisumaa et al. (2010)
22 Carbon, inorganic, dissolvedDICµmol/kgYang, YanCalculated using seacarb after Nisumaa et al. (2010)
23 Aragonite saturation stateOmega ArgYang, YanCalculated using seacarb after Nisumaa et al. (2010)
24 Calcite saturation stateOmega CalYang, YanCalculated using seacarb after Nisumaa et al. (2010)
Status:
Curation Level: Enhanced curation (CurationLevelC)
Size:
3120 data points

Data

Download dataset as tab-delimited text — use the following character encoding:


Aquarium

pCO2water_SST_wet [µatm]

Sea urchin
(presents = y, abstents = n)

Species

Repl

Loss [%]

jaw/test ratio

robustness [g/cm]

Sal
10 
pH
(total scale, Potentiometric)
11 
pH std dev [±]
(total scale, Potentiometric)
12 
AT [µmol/kg]
(Potentiometric titration)
13 
AT std dev [±]
(Potentiometric titration)
14 
Temp [°C]
(Calculated using seacarb)
15 
Temp std dev [±]
(Calculated using seacarb)
16 
CSC flag
(Calculated using seacarb afte...)
17 
CO2 [µmol/kg]
(Calculated using seacarb afte...)
18 
pCO2water_SST_wet [µatm]
(Calculated using seacarb afte...)
19 
fCO2water_SST_wet [µatm]
(Calculated using seacarb afte...)
20 
[HCO3]- [µmol/kg]
(Calculated using seacarb afte...)
21 
[CO3]2- [µmol/kg]
(Calculated using seacarb afte...)
22 
DIC [µmol/kg]
(Calculated using seacarb afte...)
23 
Omega Arg
(Calculated using seacarb afte...)
24 
Omega Cal
(Calculated using seacarb afte...)
1390nCystoseira amentacea (macroalga)a63.0037.9898.090.042531524.181.12811378377189326121654.046.12
1390nCystoseira amentacea (macroalga)b60.1037.9898.090.042531524.181.12811378377189326121654.046.12
3390nCystoseira amentacea (macroalga)a51.9837.9898.090.042531524.181.12811378377189326121654.046.12
3390nCystoseira amentacea (macroalga)b64.0237.9898.090.042531524.181.12811378377189326121654.046.12
2390yCystoseira amentacea (macroalga)a100.0037.9898.090.042531524.181.12811378377189326121654.046.12
2390yCystoseira amentacea (macroalga)b78.5137.9898.090.042531524.181.12811378377189326121654.046.12
4390yCystoseira amentacea (macroalga)a92.0937.9898.090.042531524.181.12811378377189326121654.046.12
4390yCystoseira amentacea (macroalga)b100.0037.9898.090.042531524.181.12811378377189326121654.046.12
5550nCystoseira amentacea (macroalga)a66.5637.9897.980.062530524.401.30815516515200321622343.355.07
5550nCystoseira amentacea (macroalga)b75.4237.9897.980.062530524.401.30815516515200321622343.355.07
7550nCystoseira amentacea (macroalga)a77.5037.9897.980.062530524.401.30815516515200321622343.355.07
7550nCystoseira amentacea (macroalga)b44.1737.9897.980.062530524.401.30815516515200321622343.355.07
6550yCystoseira amentacea (macroalga)a87.6537.9897.980.062530524.401.30815516515200321622343.355.07
6550yCystoseira amentacea (macroalga)b100.0037.9897.980.062530524.401.30815516515200321622343.355.07
8550yCystoseira amentacea (macroalga)a100.0037.9897.980.062530524.401.30815516515200321622343.355.07
8550yCystoseira amentacea (macroalga)b91.3837.9897.980.062530524.401.30815516515200321622343.355.07
9750nCystoseira amentacea (macroalga)a51.0037.9897.840.042530624.321.08821756754212616623132.563.89
9750nCystoseira amentacea (macroalga)b54.3337.9897.840.042530624.321.08821756754212616623132.563.89
11750nCystoseira amentacea (macroalga)a54.8437.9897.840.042530624.321.08821756754212616623132.563.89
11750nCystoseira amentacea (macroalga)b61.3037.9897.840.042530624.321.08821756754212616623132.563.89
10750yCystoseira amentacea (macroalga)a100.0037.9897.840.042530624.321.08821756754212616623132.563.89
10750yCystoseira amentacea (macroalga)b100.0037.9897.840.042530624.321.08821756754212616623132.563.89
12750yCystoseira amentacea (macroalga)a93.3037.9897.840.042530624.321.08821756754212616623132.563.89
12750yCystoseira amentacea (macroalga)b100.0037.9897.840.042530624.321.08821756754212616623132.563.89
131000nCystoseira amentacea (macroalga)a48.7937.9897.700.032530524.330.9783110921088222412623811.942.95
131000nCystoseira amentacea (macroalga)b63.7937.9897.700.032530524.330.9783110921088222412623811.942.95
151000nCystoseira amentacea (macroalga)a59.6637.9897.700.032530524.330.9783110921088222412623811.942.95
151000nCystoseira amentacea (macroalga)b59.4437.9897.700.032530524.330.9783110921088222412623811.942.95
141000yCystoseira amentacea (macroalga)a99.4437.9897.700.032530524.330.9783110921088222412623811.942.95
141000yCystoseira amentacea (macroalga)b100.0037.9897.700.032530524.330.9783110921088222412623811.942.95
161000yCystoseira amentacea (macroalga)a95.6937.9897.700.032530524.330.9783110921088222412623811.942.95
161000yCystoseira amentacea (macroalga)b92.8737.9897.700.032530524.330.9783110921088222412623811.942.95
1390nCorallina elongata (macroalga)a24.7437.9898.090.042531524.181.12811378377189326121654.046.12
1390nCorallina elongata (macroalga)b31.8537.9898.090.042531524.181.12811378377189326121654.046.12
3390nCorallina elongata (macroalga)a8.0237.9898.090.042531524.181.12811378377189326121654.046.12
3390nCorallina elongata (macroalga)b2.8737.9898.090.042531524.181.12811378377189326121654.046.12
2390yCorallina elongata (macroalga)a81.8137.9898.090.042531524.181.12811378377189326121654.046.12
2390yCorallina elongata (macroalga)b59.3937.9898.090.042531524.181.12811378377189326121654.046.12
4390yCorallina elongata (macroalga)a63.8237.9898.090.042531524.181.12811378377189326121654.046.12
4390yCorallina elongata (macroalga)b61.2137.9898.090.042531524.181.12811378377189326121654.046.12
5550nCorallina elongata (macroalga)a0.0037.9897.980.062530524.401.30815516515200321622343.355.07
5550nCorallina elongata (macroalga)b43.0337.9897.980.062530524.401.30815516515200321622343.355.07
7550nCorallina elongata (macroalga)a51.5537.9897.980.062530524.401.30815516515200321622343.355.07
7550nCorallina elongata (macroalga)b29.4237.9897.980.062530524.401.30815516515200321622343.355.07
6550yCorallina elongata (macroalga)a97.6437.9897.980.062530524.401.30815516515200321622343.355.07
6550yCorallina elongata (macroalga)b97.8437.9897.980.062530524.401.30815516515200321622343.355.07
8550yCorallina elongata (macroalga)a74.9037.9897.980.062530524.401.30815516515200321622343.355.07
8550yCorallina elongata (macroalga)b78.7537.9897.980.062530524.401.30815516515200321622343.355.07
9750nCorallina elongata (macroalga)a50.4537.9897.840.042530624.321.08821756754212616623132.563.89
9750nCorallina elongata (macroalga)b38.2637.9897.840.042530624.321.08821756754212616623132.563.89
11750nCorallina elongata (macroalga)a27.3337.9897.840.042530624.321.08821756754212616623132.563.89
11750nCorallina elongata (macroalga)b24.4237.9897.840.042530624.321.08821756754212616623132.563.89
10750yCorallina elongata (macroalga)a91.6437.9897.840.042530624.321.08821756754212616623132.563.89
10750yCorallina elongata (macroalga)b96.4837.9897.840.042530624.321.08821756754212616623132.563.89
12750yCorallina elongata (macroalga)a95.8937.9897.840.042530624.321.08821756754212616623132.563.89
12750yCorallina elongata (macroalga)b87.8537.9897.840.042530624.321.08821756754212616623132.563.89
131000nCorallina elongata (macroalga)a53.4137.9897.700.032530524.330.9783110921088222412623811.942.95
131000nCorallina elongata (macroalga)b42.7137.9897.700.032530524.330.9783110921088222412623811.942.95
151000nCorallina elongata (macroalga)a57.0637.9897.700.032530524.330.9783110921088222412623811.942.95
151000nCorallina elongata (macroalga)b57.0337.9897.700.032530524.330.9783110921088222412623811.942.95
141000yCorallina elongata (macroalga)a100.0037.9897.700.032530524.330.9783110921088222412623811.942.95
141000yCorallina elongata (macroalga)b86.8637.9897.700.032530524.330.9783110921088222412623811.942.95
161000yCorallina elongata (macroalga)a92.4937.9897.700.032530524.330.9783110921088222412623811.942.95
161000yCorallina elongata (macroalga)b97.0837.9897.700.032530524.330.9783110921088222412623811.942.95
1390nDictyota dichotoma (macroalga)a52.4137.9898.090.042531524.181.12811378377189326121654.046.12
1390nDictyota dichotoma (macroalga)b47.0437.9898.090.042531524.181.12811378377189326121654.046.12
3390nDictyota dichotoma (macroalga)a54.8937.9898.090.042531524.181.12811378377189326121654.046.12
3390nDictyota dichotoma (macroalga)b57.6737.9898.090.042531524.181.12811378377189326121654.046.12
2390yDictyota dichotoma (macroalga)a73.6637.9898.090.042531524.181.12811378377189326121654.046.12
2390yDictyota dichotoma (macroalga)b87.7637.9898.090.042531524.181.12811378377189326121654.046.12
4390yDictyota dichotoma (macroalga)a94.1137.9898.090.042531524.181.12811378377189326121654.046.12
4390yDictyota dichotoma (macroalga)b95.7837.9898.090.042531524.181.12811378377189326121654.046.12
5550nDictyota dichotoma (macroalga)a69.8337.9897.980.062530524.401.30815516515200321622343.355.07
5550nDictyota dichotoma (macroalga)b57.7737.9897.980.062530524.401.30815516515200321622343.355.07
7550nDictyota dichotoma (macroalga)a49.4837.9897.980.062530524.401.30815516515200321622343.355.07
7550nDictyota dichotoma (macroalga)b53.8837.9897.980.062530524.401.30815516515200321622343.355.07
6550yDictyota dichotoma (macroalga)a96.7337.9897.980.062530524.401.30815516515200321622343.355.07
6550yDictyota dichotoma (macroalga)b97.8537.9897.980.062530524.401.30815516515200321622343.355.07
8550yDictyota dichotoma (macroalga)a99.4637.9897.980.062530524.401.30815516515200321622343.355.07
8550yDictyota dichotoma (macroalga)b95.1037.9897.980.062530524.401.30815516515200321622343.355.07
9750nDictyota dichotoma (macroalga)a29.6837.9897.840.042530624.321.08821756754212616623132.563.89
9750nDictyota dichotoma (macroalga)b33.6837.9897.840.042530624.321.08821756754212616623132.563.89
11750nDictyota dichotoma (macroalga)a67.8537.9897.840.042530624.321.08821756754212616623132.563.89
11750nDictyota dichotoma (macroalga)b58.1337.9897.840.042530624.321.08821756754212616623132.563.89
10750yDictyota dichotoma (macroalga)a100.0037.9897.840.042530624.321.08821756754212616623132.563.89
10750yDictyota dichotoma (macroalga)b100.0037.9897.840.042530624.321.08821756754212616623132.563.89
12750yDictyota dichotoma (macroalga)a100.0037.9897.840.042530624.321.08821756754212616623132.563.89
12750yDictyota dichotoma (macroalga)b100.0037.9897.840.042530624.321.08821756754212616623132.563.89
131000nDictyota dichotoma (macroalga)a49.8537.9897.700.032530524.330.9783110921088222412623811.942.95
131000nDictyota dichotoma (macroalga)b51.3837.9897.700.032530524.330.9783110921088222412623811.942.95
151000nDictyota dichotoma (macroalga)a48.8037.9897.700.032530524.330.9783110921088222412623811.942.95
151000nDictyota dichotoma (macroalga)b42.8937.9897.700.032530524.330.9783110921088222412623811.942.95
141000yDictyota dichotoma (macroalga)a84.3337.9897.700.032530524.330.9783110921088222412623811.942.95
141000yDictyota dichotoma (macroalga)b98.9037.9897.700.032530524.330.9783110921088222412623811.942.95
161000yDictyota dichotoma (macroalga)a92.5537.9897.700.032530524.330.9783110921088222412623811.942.95
161000yDictyota dichotoma (macroalga)b78.9337.9897.700.032530524.330.9783110921088222412623811.942.95
2390Corallina elongata (macroalga)c0.3549837.9898.090.042531524.181.12811378377189326121654.046.12
4390Corallina elongata (macroalga)c0.3578137.9898.090.042531524.181.12811378377189326121654.046.12
6550Corallina elongata (macroalga)c0.3295837.9897.980.062530524.401.30815516515200321622343.355.07
8550Corallina elongata (macroalga)a0.3213637.9897.980.062530524.401.30815516515200321622343.355.07
10750Corallina elongata (macroalga)c0.3398737.9897.840.042530624.321.08821756754212616623132.563.89
12750Corallina elongata (macroalga)c0.3095037.9897.840.042530624.321.08821756754212616623132.563.89
141000Corallina elongata (macroalga)d0.3381037.9897.700.032530524.330.9783110921088222412623811.942.95
161000Corallina elongata (macroalga)d0.3316537.9897.700.032530524.330.9783110921088222412623811.942.95
2390Cystoseira amentacea (macroalga)c0.3010637.9898.090.042531524.181.12811378377189326121654.046.12
4390Cystoseira amentacea (macroalga)d0.3075737.9898.090.042531524.181.12811378377189326121654.046.12
6550Cystoseira amentacea (macroalga)b0.3019937.9897.980.062530524.401.30815516515200321622343.355.07
8550Cystoseira amentacea (macroalga)c0.3162537.9897.980.062530524.401.30815516515200321622343.355.07
10750Cystoseira amentacea (macroalga)a0.2890037.9897.840.042530624.321.08821756754212616623132.563.89
12750Cystoseira amentacea (macroalga)a0.3139837.9897.840.042530624.321.08821756754212616623132.563.89
141000Cystoseira amentacea (macroalga)b0.3040037.9897.700.032530524.330.9783110921088222412623811.942.95
161000Cystoseira amentacea (macroalga)c0.3182737.9897.700.032530524.330.9783110921088222412623811.942.95
2390Dictyota dichotoma (macroalga)a0.3544137.9898.090.042531524.181.12811378377189326121654.046.12
4390Dictyota dichotoma (macroalga)b0.3277137.9898.090.042531524.181.12811378377189326121654.046.12
6550Dictyota dichotoma (macroalga)d0.3164237.9897.980.062530524.401.30815516515200321622343.355.07
8550Dictyota dichotoma (macroalga)a0.2955137.9897.980.062530524.401.30815516515200321622343.355.07
10750Dictyota dichotoma (macroalga)d0.3277837.9897.840.042530624.321.08821756754212616623132.563.89
12750Dictyota dichotoma (macroalga)f0.3089437.9897.840.042530624.321.08821756754212616623132.563.89
141000Dictyota dichotoma (macroalga)b0.3021137.9897.700.032530524.330.9783110921088222412623811.942.95
161000Dictyota dichotoma (macroalga)a0.2764437.9897.700.032530524.330.9783110921088222412623811.942.95
4390Corallina elongata (macroalga)f98.65637.9898.090.042531524.181.12811378377189326121654.046.12
2390Corallina elongata (macroalga)f153.25037.9898.090.042531524.181.12811378377189326121654.046.12
6550Corallina elongata (macroalga)f120.85637.9897.980.062530524.401.30815516515200321622343.355.07
8550Corallina elongata (macroalga)b158.00037.9897.980.062530524.401.30815516515200321622343.355.07
10750Corallina elongata (macroalga)f143.03637.9897.840.042530624.321.08821756754212616623132.563.89
12750Corallina elongata (macroalga)f117.77837.9897.840.042530624.321.08821756754212616623132.563.89
161000Corallina elongata (macroalga)c101.32737.9897.700.032530524.330.9783110921088222412623811.942.95
141000Corallina elongata (macroalga)e132.48537.9897.700.032530524.330.9783110921088222412623811.942.95
2390Cystoseira amentacea (macroalga)f90.54537.9898.090.042531524.181.12811378377189326121654.046.12
4390Cystoseira amentacea (macroalga)f86.06837.9898.090.042531524.181.12811378377189326121654.046.12
8550Cystoseira amentacea (macroalga)e84.82137.9897.980.062530524.401.30815516515200321622343.355.07
6550Cystoseira amentacea (macroalga)d137.53637.9897.980.062530524.401.30815516515200321622343.355.07
12750Cystoseira amentacea (macroalga)f116.99037.9897.840.042530624.321.08821756754212616623132.563.89
10750Cystoseira amentacea (macroalga)e103.94437.9897.840.042530624.321.08821756754212616623132.563.89
141000Cystoseira amentacea (macroalga)a48.27637.9897.700.032530524.330.9783110921088222412623811.942.95
161000Cystoseira amentacea (macroalga)b49.27537.9897.700.032530524.330.9783110921088222412623811.942.95
4390Dictyota dichotoma (macroalga)a89.44437.9898.090.042531524.181.12811378377189326121654.046.12
2390Dictyota dichotoma (macroalga)c104.12837.9898.090.042531524.181.12811378377189326121654.046.12
6550Dictyota dichotoma (macroalga)a98.18237.9897.980.062530524.401.30815516515200321622343.355.07
8550Dictyota dichotoma (macroalga)b142.56837.9897.980.062530524.401.30815516515200321622343.355.07
12750Dictyota dichotoma (macroalga)a108.98237.9897.840.042530624.321.08821756754212616623132.563.89
10750Dictyota dichotoma (macroalga)b115.71437.9897.840.042530624.321.08821756754212616623132.563.89
141000Dictyota dichotoma (macroalga)c74.00037.9897.700.032530524.330.9783110921088222412623811.942.95
141000Dictyota dichotoma (macroalga)f85.00037.9897.700.032530524.330.9783110921088222412623811.942.95