Not logged in
PANGAEA.
Data Publisher for Earth & Environmental Science

Endres, Sonja; Unger, Juliane; Wannicke, Nicola; Nausch, Monika; Voss, Maren; Engel, Anja (2013): Response of Nodularia spumigena to pCO2 [dataset]. PANGAEA, https://doi.org/10.1594/PANGAEA.829084, Supplement to: Endres, S et al. (2013): Response of Nodularia spumigena to pCO2; Part 2: Exudation and extracellular enzyme activities. Biogeosciences, 10(1), 567-582, https://doi.org/10.5194/bg-10-567-2013

Always quote citation above when using data! You can download the citation in several formats below.

RIS CitationBibTeX Citation

Abstract:
The filamentous and diazotrophic cyanobacterium Nodularia spumigena plays a major role in the productivity of the Baltic Sea as it forms extensive blooms regularly. Under phosphorus limiting conditions Nodularia spumigena has a high enzyme affinity for dissolved organic phosphorus (DOP) by production and release of alkaline phosphatase. Additionally, it is able to degrade proteinaceous compounds by expressing the extracellular enzyme leucine aminopeptidase. As atmospheric CO2 concentrations are increasing, we expect marine phytoplankton to experience changes in several environmental parameters including pH, temperature, and nutrient availability. The aim of this study was to investigate the combined effect of CO2-induced changes in seawater carbonate chemistry and of phosphate deficiency on the exudation of organic matter, and its subsequent recycling by extracellular enzymes in a Nodularia spumigena culture. Batch cultures of Nodularia spumigena were grown for 15 days aerated with three different pCO2 levels corresponding to values from glacial periods to future values projected for the year 2100. Extracellular enzyme activities as well as changes in organic and inorganic compound concentrations were monitored. CO2 treatment-related effects were identified for cyanobacterial growth, which in turn was influencing exudation and recycling of organic matter by extracellular enzymes. Biomass production was increased by 56.5% and 90.7% in the medium and high pCO2 treatment, respectively, compared to the low pCO2 treatment and simultaneously increasing exudation. During the growth phase significantly more mucinous substances accumulated in the high pCO2 treatment reaching 363 µg Gum Xanthan eq /l compared to 269 µg Gum Xanthan eq /l in the low pCO2 treatment. However, cell-specific rates did not change. After phosphate depletion, the acquisition of P from DOP by alkaline phosphatase was significantly enhanced. Alkaline phosphatase activities were increased by factor 1.64 and 2.25, respectively, in the medium and high compared to the low pCO2 treatment. In conclusion, our results suggest that Nodularia spumigena can grow faster under elevated pCO2 by enhancing the recycling of organic matter to acquire nutrients.
Keyword(s):
Nodularia spumigena; Not applicable
Further details:
Lavigne, Héloïse; Gattuso, Jean-Pierre (2011): seacarb: seawater carbonate chemistry with R. R package version 2.4. https://cran.r-project.org/package=seacarb
Coverage:
Date/Time Start: 2010-03-29T00:00:00 * Date/Time End: 2010-04-13T00:00:00
Comment:
Values are means and standard deviations of three replicates (except one replicate bottle of the 180 ppm treatment at day 9).
In order to allow full comparability with other ocean acidification data sets, the R package seacarb (Lavigne and Gattuso, 2011) was used to compute a complete and consistent set of carbonate system variables, as described by Nisumaa et al. (2010). In this dataset the original values were archived in addition with the recalculated parameters (see related PI). The date of carbonate chemistry calculation by seacarb is 2014-02-11.
Parameter(s):
#NameShort NameUnitPrincipal InvestigatorMethod/DeviceComment
SpeciesSpeciesEndres, Sonja
DATE/TIMEDate/TimeEndres, SonjaGeocode
Incubation durationInc durdaysEndres, Sonja
TreatmentTreatEndres, Sonja
Phosphate[PO4]3-µmol/lWannicke, NicolaSpectrophotometer Hitachi U-2000
Phosphate, standard deviation[PO4]3- std dev±Wannicke, NicolaSpectrophotometer Hitachi U-2000
Nitrogen, inorganic, dissolvedDINµmol/lWannicke, NicolaSpectrophotometer Hitachi U-2000
Nitrogen, inorganic, dissolved, standard deviationDIN std dev±Wannicke, NicolaSpectrophotometer Hitachi U-2000
Chlorophyll aChl aµg/lWannicke, NicolaFluorometry
10 Chlorophyll a, standard deviationChl a std dev±Wannicke, NicolaFluorometry
11 Bacteria, abundanceBact abund109 #/cm3Wannicke, NicolaFlow cytometry
12 Bacteria, abundance, standard deviationBact abund std dev±Wannicke, NicolaFlow cytometry
13 Carbon, organic, dissolvedDOCµmol/lEndres, SonjaTOC analyzer (Shimadzu)
14 Carbon, organic, dissolved, standard deviationDOC std dev±Endres, SonjaTOC analyzer (Shimadzu)
15 Nitrogen, organic, dissolvedDONµmol/lEndres, SonjaTOC analyzer (Shimadzu)
16 Standard deviationStd dev±Endres, SonjaTOC analyzer (Shimadzu)
17 Phosphate, organic, dissolvedDOPµmol/lUnger, JulianeSpectrophotometer (SPEC)
18 Standard deviationStd dev±Unger, JulianeSpectrophotometer (SPEC)
19 Mucinous substancesMucinous subsµg Xeq/lEndres, SonjaUV/VIS Spectrometer
20 Standard deviationStd dev±Endres, SonjaUV/VIS Spectrometer
21 Coomassie stainable particlesCSPµm2/lEndres, SonjaMicroscopy
22 Standard deviationStd dev±Endres, SonjaMicroscopy
23 Coomassie stainable particles, abundanceCSP abund1/lEndres, SonjaMicroscopy
24 Standard deviationStd dev±Endres, SonjaMicroscopy
25 Nodularia spumigenaN. spumigena#/lWannicke, NicolaMicroscopy
26 Standard deviationStd dev±Wannicke, NicolaMicroscopy
27 Coomassie stainable particles, equivalent spherical diameterCSP ESDµmEndres, SonjaMicroscopy
28 Standard deviationStd dev±Endres, SonjaMicroscopy
29 alpha-glucosidase activityMUF-agluµmol/l/hEndres, SonjaFluorometry
30 Standard deviationStd dev±Endres, SonjaFluorometry
31 beta-glucosidase activityMUF-bgluµmol/l/hEndres, SonjaFluorometry
32 Standard deviationStd dev±Endres, SonjaFluorometry
33 Leucine aminopeptidase activityLeu aminopepnmol/l/hEndres, SonjaFluorometry
34 Standard deviationStd dev±Endres, SonjaFluorometry
35 Alkaline phosphatase activityALKP Anmol/l/hEndres, SonjaFluorometry
36 Standard deviationStd dev±Endres, SonjaFluorometry
37 Alkaline phosphatase, Km valueALKP Kmµmol/lEndres, SonjaFluorometry
38 Standard deviationStd dev±Endres, SonjaFluorometry
39 Temperature, waterTemp°CWannicke, Nicola
40 SalinitySalWannicke, Nicola
41 pHpHWannicke, Nicola
42 pH, standard deviationpH std dev±Wannicke, Nicola
43 Carbon, inorganic, dissolvedDICµmol/kgWannicke, Nicola
44 Carbon, inorganic, dissolved, standard deviationDIC std dev±Wannicke, Nicola
45 Alkalinity, totalATµmol/kgWannicke, Nicolatotal scale
46 Alkalinity, total, standard deviationAT std dev±Wannicke, Nicolatotal scale
47 Partial pressure of carbon dioxide (water) at sea surface temperature (wet air)pCO2water_SST_wetµatmWannicke, Nicola
48 Partial pressure of carbon dioxide, standard deviationpCO2 std dev±Wannicke, Nicola
49 Carbonate system computation flagCSC flagYang, YanCalculated using seacarb after Nisumaa et al. (2010)
50 Carbon dioxideCO2µmol/kgYang, YanCalculated using seacarb after Nisumaa et al. (2010)
51 Partial pressure of carbon dioxide (water) at sea surface temperature (wet air)pCO2water_SST_wetµatmYang, YanCalculated using seacarb after Nisumaa et al. (2010)
52 Fugacity of carbon dioxide (water) at sea surface temperature (wet air)fCO2water_SST_wetµatmYang, YanCalculated using seacarb after Nisumaa et al. (2010)
53 Bicarbonate ion[HCO3]-µmol/kgYang, YanCalculated using seacarb after Nisumaa et al. (2010)
54 Carbonate ion[CO3]2-µmol/kgYang, YanCalculated using seacarb after Nisumaa et al. (2010)
55 Alkalinity, total, standard deviationAT std dev±Yang, YanCalculated using seacarb after Nisumaa et al. (2010)
56 Aragonite saturation stateOmega ArgYang, YanCalculated using seacarb after Nisumaa et al. (2010)
57 Calcite saturation stateOmega CalYang, YanCalculated using seacarb after Nisumaa et al. (2010)
Status:
Curation Level: Enhanced curation (CurationLevelC)
Size:
660 data points

Data

Download dataset as tab-delimited text — use the following character encoding:


Species

Date/Time

Inc dur [days]

Treat

[PO4]3- [µmol/l]
(Spectrophotometer Hitachi U-2000)

[PO4]3- std dev [±]
(Spectrophotometer Hitachi U-2000)

DIN [µmol/l]
(Spectrophotometer Hitachi U-2000)

DIN std dev [±]
(Spectrophotometer Hitachi U-2000)

Chl a [µg/l]
(Fluorometry)
10 
Chl a std dev [±]
(Fluorometry)
11 
Bact abund [109 #/cm3]
(Flow cytometry)
12 
Bact abund std dev [±]
(Flow cytometry)
13 
DOC [µmol/l]
(TOC analyzer (Shimadzu))
14 
DOC std dev [±]
(TOC analyzer (Shimadzu))
15 
DON [µmol/l]
(TOC analyzer (Shimadzu))
16 
Std dev [±]
(TOC analyzer (Shimadzu))
17 
DOP [µmol/l]
(Spectrophotometer)
18 
Std dev [±]
(Spectrophotometer)
19 
Mucinous subs [µg Xeq/l]
(UV/VIS Spectrometer)
20 
Std dev [±]
(UV/VIS Spectrometer)
21 
CSP [µm2/l]
(Microscopy)
22 
Std dev [±]
(Microscopy)
23 
CSP abund [1/l]
(Microscopy)
24 
Std dev [±]
(Microscopy)
25 
N. spumigena [#/l]
(Microscopy)
26 
Std dev [±]
(Microscopy)
27 
CSP ESD [µm]
(Microscopy)
28 
Std dev [±]
(Microscopy)
29 
MUF-aglu [µmol/l/h]
(Fluorometry)
30 
Std dev [±]
(Fluorometry)
31 
MUF-bglu [µmol/l/h]
(Fluorometry)
32 
Std dev [±]
(Fluorometry)
33 
Leu aminopep [nmol/l/h]
(Fluorometry)
34 
Std dev [±]
(Fluorometry)
35 
ALKP A [nmol/l/h]
(Fluorometry)
36 
Std dev [±]
(Fluorometry)
37 
ALKP Km [µmol/l]
(Fluorometry)
38 
Std dev [±]
(Fluorometry)
39 
Temp [°C]
40 
Sal
41 
pH
42 
pH std dev [±]
43 
DIC [µmol/kg]
44 
DIC std dev [±]
45 
AT [µmol/kg]
(total scale)
46 
AT std dev [±]
(total scale)
47 
pCO2water_SST_wet [µatm]
48 
pCO2 std dev [±]
49 
CSC flag
(Calculated using seacarb afte...)
50 
CO2 [µmol/kg]
(Calculated using seacarb afte...)
51 
pCO2water_SST_wet [µatm]
(Calculated using seacarb afte...)
52 
fCO2water_SST_wet [µatm]
(Calculated using seacarb afte...)
53 
[HCO3]- [µmol/kg]
(Calculated using seacarb afte...)
54 
[CO3]2- [µmol/kg]
(Calculated using seacarb afte...)
55 
AT std dev [±]
(Calculated using seacarb afte...)
56 
Omega Arg
(Calculated using seacarb afte...)
57 
Omega Cal
(Calculated using seacarb afte...)
Nodularia spumigena (bacteria)2010-03-29T00:000low0.290.020.220.310.740.080.4310.254306.518.616.020.070.340.04120.987.291763474.75439631.54100041273378967.0044895367925.002.530.280.000.001127.661098.120.000.0072.058.860.880.27239.18.020.021651.98.91724.26.4464.129.9916.0469.3467.81559.776.21728.51.302.26
Nodularia spumigena (bacteria)2010-03-29T00:000medium0.320.080.280.160.870.090.5610.222295.623.918.021.170.330.0689.836.671717872.60454055.89161826309718016.0038482789377.002.170.380.000.000.000.000.000.0093.8014.341.030.27239.17.950.011656.83.61713.42.8561.08.7919.0555.9554.11572.465.41717.51.121.94
Nodularia spumigena (bacteria)2010-03-29T00:000high0.340.020.220.020.710.040.3140.022330.176.317.671.740.380.06104.2116.771493057.45395141.83133220066250113.0032089478906.002.040.230.000.00188.79327.0045.6379.0363.158.560.900.14239.17.930.031676.72.71730.32.6590.735.3920.2589.8587.91593.363.31733.61.081.88
Nodularia spumigena (bacteria)2010-04-01T00:003low0.050.020.410.353.040.120.2680.082270.68.715.610.010.270.02196.9920.942961152.07823289.90108366822811469.00734833181419.003.040.517316.581596.059080.861229.7477.6618.62163.425.97239.18.160.031607.410.21709.73.2330.126.3911.1326.0324.91495.4100.81718.61.722.99
Nodularia spumigena (bacteria)2010-04-01T00:003medium0.030.010.240.034.040.790.4950.168297.88.515.350.140.240.02179.434.984450488.081657788.50179548503482350.0084650754924.002.630.806750.213079.449632.353684.7478.4716.09286.57102.94239.18.090.031617.511.41703.53.5388.836.0913.3388.5387.31517.187.11710.01.492.58
Nodularia spumigena (bacteria)2010-04-01T00:003high0.040.000.220.023.460.070.4330.165296.81.616.181.560.280.07157.5114.392374424.08515648.18170104454957294.00815810338072.002.150.339457.642757.5912028.263953.4149.7416.0273.065.33239.17.940.021667.91.91720.55.1576.823.3919.6573.0571.21584.064.41726.41.101.91
Nodularia spumigena (bacteria)2010-04-07T00:009low0.010.010.280.273.382.270.5140.156308.719.615.441.790.270.08218.590.852333878.80595434.814547405835685910.001142640172660.001.720.4816224.762106.5017580.952386.65105.1749.20426.1326.572.710.60239.18.220.041570.414.61690.85.0276.727.199.4275.1274.21448.8112.21697.41.913.33
Nodularia spumigena (bacteria)2010-04-07T00:009medium0.020.020.200.125.150.230.5410.239319.917.215.910.820.250.09218.3924.735032202.30384605.934427165114983627.001313500240299.001.950.2516084.431076.9119614.281694.69241.2191.40697.59112.743.691.23239.18.180.031581.12.81690.95.9305.320.3910.4305.4304.41467.1103.61696.61.773.07
Nodularia spumigena (bacteria)2010-04-07T00:009high0.010.000.140.157.270.420.5340.385322.66.115.810.440.230.04254.739.687296840.86492557.12330645628221274.002737000135264.002.510.2211848.771984.7713108.382297.48213.6659.46958.2317.785.571.71239.18.070.021620.75.31702.33.8412.216.9914.0408.5407.21523.283.51708.21.422.48
Nodularia spumigena (bacteria)2010-04-13T00:0015low0.030.010.200.041.490.280.6620.322318.726.814.650.740.240.07269.1036.615273706.891321870.805720889112564925.001312133190508.001.790.0315569.912817.0618696.482398.84267.97133.84363.6658.10239.18.200.041568.011.41683.322.6291.829.399.9288.4287.51450.9107.31688.71.833.18
Nodularia spumigena (bacteria)2010-04-13T00:0015medium0.020.010.210.153.050.450.2200.033323.716.415.130.490.190.02318.4921.432340175.561083912.722568285217304089.001658933405087.001.770.2015536.042656.2416053.932851.72375.6360.70710.27175.14239.18.140.011595.94.91696.72.0339.612.5911.6339.7338.61488.495.91700.81.642.84
Nodularia spumigena (bacteria)2010-04-13T00:0015high0.020.010.100.004.411.090.6100.524306.015.816.790.410.210.04362.5727.543707359.991527392.356769318113345274.002402767406401.001.490.3318815.807861.1018071.197070.26244.6458.22724.5840.72239.18.030.061626.921.11702.26.7452.982.2915.4451.3449.81534.876.71704.71.312.28