Citation:

PANGAEA.818214

Name: Abundance of Gamma-A nifH genes of unicellular diazotrophic cyanobacteria in the temperate oligotrophic North Pacific Ocean
Published: 2013-08-12
License: https://creativecommons.org/licenses/by/3.0/
Keywords: MAREDAT_Diazotrophs_Collection

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Keyword(s):

MAREDAT_Diazotrophs_Collection

Related to:

Luo, Yawei; Doney, Scott C; Anderson, L A; Benavides, Mar; Berman-Frank, I; Bode, Antonio; Bonnet, S; Boström, Kjärstin H; Böttjer, D; Capone, D G; Carpenter, E J; Chen, Yaw-Lin; Church, Matthew J; Dore, John E; Falcón, Luisa I; Fernández, A; Foster, R A; Furuya, Ken; Gomez, Fernando; Gundersen, Kjell; Hynes, Annette M; Karl, David Michael; Kitajima, Satoshi; Langlois, Rebecca; LaRoche, Julie; Letelier, Ricardo M; Marañón, Emilio; McGillicuddy Jr, Dennis J; Moisander, Pia H; Moore, C Mark; Mouriño-Carballido, Beatriz; Mulholland, Margaret R; Needoba, Joseph A; Orcutt, Karen M; Poulton, Alex J; Rahav, Eyal; Raimbault, Patrick; Rees, Andrew; Riemann, Lasse; Shiozaki, Takuhei; Subramaniam, Ajit; Tyrrell, Toby; Turk-Kubo, Kendra A; Varela, Manuel; Villareal, Tracy A; Webb, Eric A; White, Angelicque E; Wu, Jingfeng; Zehr, Jonathan P (2012): Database of diazotrophs in global ocean: abundance, biomass and nitrogen fixation rates. Earth System Science Data, 4, 47-73, https://doi.org/10.5194/essd-4-47-2012

Needoba, Joseph A; Foster, Rachel A; Sakamoto, Carole M; Zehr, Jonathan P; Johnson, Kenneth S (2007): Nitrogen fixation by unicellular diazotrophic cyanobacteria in the temperate oligotrophic North Pacific Ocean. Limnology and Oceanography, 52(4), 1317-1327, https://doi.org/10.4319/lo.2007.52.4.1317

Coverage:

Latitude: 34.000000 * Longitude: -129.000000

Date/Time Start: 2005-10-25T00:00:00 * Date/Time End: 2005-10-25T00:00:00

Minimum DEPTH, water: 10 m * Maximum DEPTH, water: 100 m

Event(s):

WesternFlyer2005-10-25 * Latitude: 34.000000 * Longitude: -129.000000 * Date/Time: 2005-10-25T00:00:00 * Location: North Pacific * Method/Device: (CTD-RO)

Parameter(s):

#	Name	Short Name	Unit	Principal Investigator	Method/Device	Comment
1	Latitude of event	Latitude
2	Longitude of event	Longitude
3	Date/Time of event	Date/Time
4	DEPTH, water	Depth water	m			Geocode
5	Unicellular cyanobacteria-A, abundance expressed in number of nifH gene copies	UCYN-A abund nifH copies	10⁶ #/m³	Needoba, Joseph A	Fluorescence-based quantitative real-time PCR (qPCR)
6	Unicellular cyanobacteria-A, biological trait, ratio expressed in mass of carbon per amount of nifH gene copies	UCYN-A C per nifH copies	mg/10⁶ #	Luo, Yawei	Calculated after Luo et al. (2012)
7	Unicellular cyanobacteria-B, abundance expressed in number of nifH gene copies	UCYN-B abund nifH copies	10⁶ #/m³	Needoba, Joseph A	Fluorescence-based quantitative real-time PCR (qPCR)
8	Unicellular cyanobacteria-B, biological trait, ratio expressed in mass of carbon per amount of nifH gene copies	UCYN-B C per nifH copies	mg/10⁶ #	Luo, Yawei	Calculated after Luo et al. (2012)
9	Unicellular cyanobacteria-C, abundance expressed in number of nifH gene copies	UCYN-C abund nifH copies	10⁶ #/m³	Needoba, Joseph A	Fluorescence-based quantitative real-time PCR (qPCR)
10	Unicellular cyanobacteria-C, biological trait, ratio expressed in mass of carbon per amount of nifH gene copies	UCYN-C C per nifH copies	mg/10⁶ #	Luo, Yawei	Calculated after Luo et al. (2012)
11	Unicellular cyanobacteria, biomass	UCYN biom	mg/m²	Luo, Yawei	Calculated after Luo et al. (2012)
12	Diazotrophs, total biomass as carbon	Diazotrophs total C	mg/m³	Luo, Yawei	Calculated after Luo et al. (2012)
13	Temperature, water	Temp	°C	Needoba, Joseph A
14	Salinity	Sal		Needoba, Joseph A
15	Nitrate	[NO3]-	µmol/l	Needoba, Joseph A
16	Phosphate	[PO4]3-	µmol/l	Needoba, Joseph A
17	Iron	Fe	nmol/l	Needoba, Joseph A

License:

Creative Commons Attribution 3.0 Unported (CC-BY-3.0)

Size:

78 data points

Data

Download dataset as tab-delimited text — use the following character encoding:

1 Latitude	2 Longitude	3 Date/Time	4 Depth water [m]	5 UCYN-A abund nifH copies [10⁶ #/m³]	6 UCYN-A C per nifH copies [mg/10⁶ #]	7 UCYN-B abund nifH copies [10⁶ #/m³]	8 UCYN-B C per nifH copies [mg/10⁶ #]	9 UCYN-C abund nifH copies [10⁶ #/m³]	10 UCYN-C C per nifH copies [mg/10⁶ #]	11 UCYN biom [mg/m²]	12 Diazotrophs total C [mg/m³]	13 Temp [°C]	14 Sal	15 [NO3]- [µmol/l]	16 [PO4]3- [µmol/l]	17 Fe [nmol/l]
34.00	-129.00	2005-10-25	10	7.2736	0.0002	0.0184	0.02	0.0000	0.01	0.0018	0.002	19.34	33.43	0.007	0.132	0.0938
34.00	-129.00	2005-10-25	20	4.5158	0.0002	0.3395	0.02	0.0000	0.01	0.0077	0.008	19.33	33.46	0.009	0.122	0.0925
34.00	-129.00	2005-10-25	40	10.3044	0.0002	1.5823	0.02	0.7500	0.01	0.0412	0.041	19.12	33.49	0.007	0.111	0.0762
34.00	-129.00	2005-10-25	60	5.7667	0.0002	0.1871	0.02	0.0369	0.01	0.0053	0.005	16.54	33.48	0.009	0.093	0.0783
34.00	-129.00	2005-10-25	80	0.1220	0.0002	0.0000	0.02	0.0000	0.01	0.0000	0.000	15.31	33.52	0.008	0.114	0.0798
34.00	-129.00	2005-10-25	100	0.0000	0.0002	0.3569	0.02	0.0000	0.01	0.0071	0.007	14.66	33.56	0.045	0.137	0.1085