Citation:

PANGAEA.818214

Name: Abundance of Gamma-A nifH genes at Stn Aloha in the oligotrophic North Pacific Ocean
Published: 2013-08-09
License: https://creativecommons.org/licenses/by/3.0/
Keywords: MAREDAT_Diazotrophs_Collection

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Keyword(s):

MAREDAT_Diazotrophs_Collection

Related to:

Church, Matthew J; Jenkins, Bethany D; Karl, David Michael; Zehr, Jonathan P (2005): Vertical distributions of nitrogen-fixing phylotypes at Stn Aloha in the oligotrophic North Pacific Ocean. Aquatic Microbial Ecology, 38, 3-14, https://doi.org/10.3354/ame038003

Luo, Yawei; Doney, Scott C; Anderson, L A; Benavides, Mar; Berman-Frank, I; Bode, Antonio; Bonnet, S; Boström, Kjärstin H; Böttjer, D; Capone, D G; Carpenter, E J; Chen, Yaw-Lin; Church, Matthew J; Dore, John E; Falcón, Luisa I; Fernández, A; Foster, R A; Furuya, Ken; Gomez, Fernando; Gundersen, Kjell; Hynes, Annette M; Karl, David Michael; Kitajima, Satoshi; Langlois, Rebecca; LaRoche, Julie; Letelier, Ricardo M; Marañón, Emilio; McGillicuddy Jr, Dennis J; Moisander, Pia H; Moore, C Mark; Mouriño-Carballido, Beatriz; Mulholland, Margaret R; Needoba, Joseph A; Orcutt, Karen M; Poulton, Alex J; Rahav, Eyal; Raimbault, Patrick; Rees, Andrew; Riemann, Lasse; Shiozaki, Takuhei; Subramaniam, Ajit; Tyrrell, Toby; Turk-Kubo, Kendra A; Varela, Manuel; Villareal, Tracy A; Webb, Eric A; White, Angelicque E; Wu, Jingfeng; Zehr, Jonathan P (2012): Database of diazotrophs in global ocean: abundance, biomass and nitrogen fixation rates. Earth System Science Data, 4, 47-73, https://doi.org/10.5194/essd-4-47-2012

Coverage:

Latitude: 22.750000 * Longitude: -158.000000

Date/Time Start: 2002-12-14T00:00:00 * Date/Time End: 2002-12-14T00:00:00

Minimum DEPTH, water: 5 m * Maximum DEPTH, water: 200 m

Event(s):

ALOHA2002-12-14 * Latitude: 22.750000 * Longitude: -158.000000 * Date/Time: 2002-12-14T00:00:00 * Location: Hawaiian Islands, North Central Pacific

Parameter(s):

#	Name	Short Name	Unit	Principal Investigator	Method/Device	Comment
1	Event label	Event
2	Latitude of event	Latitude
3	Longitude of event	Longitude
4	Date/Time of event	Date/Time
5	DEPTH, water	Depth water	m			Geocode
6	Trichodesmium, abundance expressed in number of nifH gene copies	Trichodesmium abund nifH copies	10⁶ #/m³	Church, Matthew J	Fluorescence-based quantitative real-time PCR (qPCR)
7	Trichodesmium abundance, total	Trichodesmium abund total	10⁶ #/m³	Church, Matthew J	Fluorescence-based quantitative real-time PCR (qPCR)
8	Trichodesmium, biomass as carbon	Trichodesmium C	mg/m³	Luo, Yawei	Calculated after Luo et al. (2012)
9	Unicellular cyanobacteria-A, abundance expressed in number of nifH gene copies	UCYN-A abund nifH copies	10⁶ #/m³	Church, Matthew J	Fluorescence-based quantitative real-time PCR (qPCR)
10	Unicellular cyanobacteria-A, biological trait, ratio expressed in mass of carbon per amount of nifH gene copies	UCYN-A C per nifH copies	mg/10⁶ #	Luo, Yawei	Calculated after Luo et al. (2012)
11	Unicellular cyanobacteria-B, abundance expressed in number of nifH gene copies	UCYN-B abund nifH copies	10⁶ #/m³	Church, Matthew J	Fluorescence-based quantitative real-time PCR (qPCR)
12	Unicellular cyanobacteria-B, biological trait, ratio expressed in mass of carbon per amount of nifH gene copies	UCYN-B C per nifH copies	mg/10⁶ #	Luo, Yawei	Calculated after Luo et al. (2012)
13	Unicellular cyanobacteria, biomass	UCYN biom	mg/m²	Luo, Yawei	Calculated after Luo et al. (2012)
14	Diazotrophs, total biomass as carbon	Diazotrophs total C	mg/m³	Church, Matthew J	Fluorescence-based quantitative real-time PCR (qPCR)
15	Comment	Comment		Church, Matthew J
16	CIII, abundance expressed in number of nifH gene copies	CIII abund nifH copies	10⁶ #/m³	Church, Matthew J	Fluorescence-based quantitative real-time PCR (qPCR)

License:

Creative Commons Attribution 3.0 Unported (CC-BY-3.0)

Size:

75 data points

Data

Download dataset as tab-delimited text — use the following character encoding:

1 Event	2 Latitude	3 Longitude	4 Date/Time	5 Depth water [m]	6 Trichodesmium abund nifH copies [10⁶ #/m³]	7 Trichodesmium abund total [10⁶ #/m³]	8 Trichodesmium C [mg/m³]	9 UCYN-A abund nifH copies [10⁶ #/m³]	10 UCYN-A C per nifH copies [mg/10⁶ #]	11 UCYN-B abund nifH copies [10⁶ #/m³]	12 UCYN-B C per nifH copies [mg/10⁶ #]	13 UCYN biom [mg/m²]	14 Diazotrophs total C [mg/m³]	15 Comment	16 CIII abund nifH copies [10⁶ #/m³]
ALOHA2002-12-14	22.75	-158.00	2002-12-14	5	7.6380	0.3	2.291	0.1937	0.0002			0.0000	2.291
ALOHA2002-12-14	22.75	-158.00	2002-12-14	25	2.9866	0.3	0.896	186.3710	0.0002	1.6339	0.02	0.0700	0.966		100.01
ALOHA2002-12-14	22.75	-158.00	2002-12-14	45	1.0763	0.3	0.323	111.2326	0.0002	2.0105	0.02	0.0625	0.385		75.84
ALOHA2002-12-14	22.75	-158.00	2002-12-14	75	2.5366	0.3	0.761	55.7596	0.0002	3.3770	0.02	0.0787	0.840		32.00
ALOHA2002-12-14	22.75	-158.00	2002-12-14	100	0.0121	0.3	0.004	6.9798	0.0002	0.2615	0.02	0.0066	0.010		8.34
ALOHA2002-12-14	22.75	-158.00	2002-12-14	125				0.1403	0.0002	0.0352	0.02	0.0007	0.001		0.96
ALOHA2002-12-14	22.75	-158.00	2002-12-14	150				0.4210	0.0002	0.0100	0.02	0.0003	0.000	''UCYN-B detected but not quantifiable, assigned 10 copies L-1''	0.82
ALOHA2002-12-14	22.75	-158.00	2002-12-14	175				0.1983	0.0002	0.0364	0.02	0.0008	0.001		0.37
ALOHA2002-12-14	22.75	-158.00	2002-12-14	200						0.0100	0.02	0.0002	0.000	''UCYN-B detected but not quantifiable, assigned 10 copies L-1''	0.62