Boström, Kjärstin H; Riemann, Lasse; Li Zweifel, Ulla; Hagström, Åke (2013): Abundance of nifH genes in the Baltic Sea [dataset]. PANGAEA, https://doi.org/10.1594/PANGAEA.817719, In: Luo, Yawei; Doney, Scott C; Anderson, L A; Benavides, Mar; Berman-Frank, I; Bode, Antonio; Bonnet, S; Boström, Kjärstin H; Böttjer, D; Capone, D G; Carpenter, E J; Chen, Yaw-Lin; Church, Matthew J; Dore, John E; Falcón, Luisa I; Fernández, A; Foster, R A; Furuya, Ken; Gomez, Fernando; Gundersen, Kjell; Hynes, Annette M; Karl, David Michael; Kitajima, Satoshi; Langlois, Rebecca; LaRoche, Julie; Letelier, Ricardo M; Marañón, Emilio; McGillicuddy Jr, Dennis J; Moisander, Pia H; Moore, C Mark; Mouriño-Carballido, Beatriz; Mulholland, Margaret R; Needoba, Joseph A; Orcutt, Karen M; Poulton, Alex J; Rahav, Eyal; Raimbault, Patrick; Rees, Andrew; Riemann, Lasse; Shiozaki, Takuhei; Subramaniam, Ajit; Tyrrell, Toby; Turk-Kubo, Kendra A; Varela, Manuel; Villareal, Tracy A; Webb, Eric A; White, Angelicque E; Wu, Jingfeng; Zehr, Jonathan P (2013): Global distributions of diazotrophs abundance, biomass and nitrogen fixation rates - Collection of source datasets - Contribution to the MAREDAT World Ocean Atlas of Plankton Functional Types [dataset publication series]. PANGAEA, https://doi.org/10.1594/PANGAEA.818214
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Related to:
Boström, Kjärstin H; Riemann, Lasse; Li Zweifel, Ulla; Hagström, Åke (2007): Nodularia sp. nifH gene transcripts in the Baltic Sea proper. Journal of Plankton Research, 29(4), 391-399, https://doi.org/10.1093/plankt/fbm019
Luo, Yawei; Doney, Scott C; Anderson, L A; Benavides, Mar; Berman-Frank, I; Bode, Antonio; Bonnet, S; Boström, Kjärstin H; Böttjer, D; Capone, D G; Carpenter, E J; Chen, Yaw-Lin; Church, Matthew J; Dore, John E; Falcón, Luisa I; Fernández, A; Foster, R A; Furuya, Ken; Gomez, Fernando; Gundersen, Kjell; Hynes, Annette M; Karl, David Michael; Kitajima, Satoshi; Langlois, Rebecca; LaRoche, Julie; Letelier, Ricardo M; Marañón, Emilio; McGillicuddy Jr, Dennis J; Moisander, Pia H; Moore, C Mark; Mouriño-Carballido, Beatriz; Mulholland, Margaret R; Needoba, Joseph A; Orcutt, Karen M; Poulton, Alex J; Rahav, Eyal; Raimbault, Patrick; Rees, Andrew; Riemann, Lasse; Shiozaki, Takuhei; Subramaniam, Ajit; Tyrrell, Toby; Turk-Kubo, Kendra A; Varela, Manuel; Villareal, Tracy A; Webb, Eric A; White, Angelicque E; Wu, Jingfeng; Zehr, Jonathan P (2012): Database of diazotrophs in global ocean: abundance, biomass and nitrogen fixation rates. Earth System Science Data, 4, 47-73, https://doi.org/10.5194/essd-4-47-2012
Coverage:
Median Latitude: 57.442826 * Median Longitude: 17.366304 * South-bound Latitude: 57.260000 * West-bound Longitude: 16.680000 * North-bound Latitude: 57.590000 * East-bound Longitude: 20.050000
Date/Time Start: 1999-07-12T00:00:00 * Date/Time End: 2001-10-08T00:00:00
Minimum DEPTH, water: 1 m * Maximum DEPTH, water: 4 m
Event(s):
Humboldt1999-07-12 * Latitude: 57.320000 * Longitude: 20.050000 * Date/Time: 1999-07-12T00:00:00 * Location: Baltic Sea * Method/Device: Water sample (WS)
Comment:
The heterocyst species is Nodularia, not Richelia. Size is assuming 8 um wide, 6 um long, see Laamane et al. (2001).
Parameter(s):
| # | Name | Short Name | Unit | Principal Investigator | Method/Device | Comment |
|---|---|---|---|---|---|---|
| 1 | Event label | Event | ||||
| 2 | Date/Time of event | Date/Time | ||||
| 3 | Latitude of event | Latitude | ||||
| 4 | Longitude of event | Longitude | ||||
| 5 | DEPTH, water | Depth water | m | Geocode | ||
| 6 | Richelia, abundance expressed in number of nifH gene copies | Richelia abund nifH copies | 106 #/m3 | Boström, Kjärstin H | Fluorescence-based quantitative real-time PCR (qPCR) | |
| 7 | Richelia, biological trait, ratio expressed in mass of carbon per amount of nifH gene copies | Richelia C per nifH copies | mg/106 # | Luo, Yawei | Calculated after Luo et al. (2012) | |
| 8 | Heterocyst, biomass | Heterocyst biom | mg/m3 | Luo, Yawei | Calculated after Luo et al. (2012) | |
| 9 | Diazotrophs, total biomass as carbon | Diazotrophs total C | mg/m3 | Luo, Yawei | Calculated after Luo et al. (2012) |
License:
Creative Commons Attribution 3.0 Unported (CC-BY-3.0)
Size:
232 data points
Data
| 1 Event | 2 Date/Time | 3 Latitude | 4 Longitude | 5 Depth water [m] | 6 Richelia abund nifH copies [106 #/m3] | 7 Richelia C per nifH copies [mg/106 #] | 8 Heterocyst biom [mg/m3] | 9 Diazotrophs total C [mg/m3] |
|---|---|---|---|---|---|---|---|---|
| Humboldt1999-07-12 | 1999-07-12 | 57.32 | 20.05 | 1 | 0.000 | 0.06 | 0.000 | 0.000 |
| Humboldt1999-07-12 | 1999-07-12 | 57.32 | 20.05 | 1 | 36.500 | 0.06 | 2.190 | 2.190 |
| Humboldt1999-07-12 | 1999-07-12 | 57.32 | 20.05 | 1 | 0.374 | 0.06 | 0.022 | 0.022 |
| Humboldt1999-07-12 | 1999-07-12 | 57.32 | 20.05 | 1 | 0.000 | 0.06 | 0.000 | 0.000 |
| Humboldt1999-07-12 | 1999-07-12 | 57.32 | 20.05 | 1 | 0.000 | 0.06 | 0.000 | 0.000 |
| Humboldt1999-07-12 | 1999-07-12 | 57.32 | 20.05 | 1 | 0.000 | 0.06 | 0.000 | 0.000 |
| Humboldt1999-07-12 | 1999-07-12 | 57.32 | 20.05 | 1 | 2.090 | 0.06 | 0.125 | 0.125 |
| Humboldt1999-07-12 | 1999-07-12 | 57.32 | 20.05 | 1 | 0.055 | 0.06 | 0.003 | 0.003 |
| Humboldt1999-07-12 | 1999-07-12 | 57.32 | 20.05 | 1 | 0.000 | 0.06 | 0.000 | 0.000 |
| Humboldt1999-07-12 | 1999-07-12 | 57.32 | 20.05 | 1 | 1.040 | 0.06 | 0.062 | 0.062 |
| Humboldt1999-07-12 | 1999-07-12 | 57.32 | 20.05 | 1 | 0.175 | 0.06 | 0.010 | 0.011 |
| Humboldt1999-07-12 | 1999-07-12 | 57.32 | 20.05 | 1 | 4.110 | 0.06 | 0.247 | 0.247 |
| Humboldt1999-07-12 | 1999-07-12 | 57.32 | 20.05 | 1 | 2.090 | 0.06 | 0.125 | 0.125 |
| Thjelvar2001-06-05_01 | 2001-06-05 | 57.26 | 16.68 | 4 | 104.976 | 0.06 | 6.299 | 6.299 |
| Thjelvar2001-06-05_02 | 2001-06-05 | 57.31 | 16.82 | 4 | 22.860 | 0.06 | 1.372 | 1.372 |
| Thjelvar2001-06-05_03 | 2001-06-05 | 57.38 | 16.96 | 4 | 56.934 | 0.06 | 3.416 | 3.416 |
| Thjelvar2001-06-05_04 | 2001-06-05 | 57.43 | 17.10 | 4 | 17.406 | 0.06 | 1.044 | 1.044 |
| Thjelvar2001-06-05_05 | 2001-06-05 | 57.46 | 17.27 | 4 | 83.328 | 0.06 | 5.000 | 5.000 |
| Thjelvar2001-06-05_06 | 2001-06-05 | 57.49 | 17.46 | 4 | 35.784 | 0.06 | 2.147 | 2.147 |
| Thjelvar2001-06-05_07 | 2001-06-05 | 57.53 | 17.64 | 4 | 38.358 | 0.06 | 2.302 | 2.301 |
| Thjelvar2001-06-05_08 | 2001-06-05 | 57.56 | 17.83 | 4 | 24.492 | 0.06 | 1.470 | 1.470 |
| Thjelvar2001-06-05_09 | 2001-06-05 | 57.59 | 18.00 | 4 | 166.770 | 0.06 | 10.006 | 10.006 |
| Thjelvar2001-06-26_01 | 2001-06-26 | 57.26 | 16.68 | 4 | 0.000 | 0.06 | 0.000 | 0.000 |
| Thjelvar2001-06-26_02 | 2001-06-26 | 57.31 | 16.82 | 4 | 2726.718 | 0.06 | 163.603 | 163.603 |
| Thjelvar2001-06-26_03 | 2001-06-26 | 57.38 | 16.96 | 4 | 3434.996 | 0.06 | 206.100 | 206.100 |
| Thjelvar2001-06-26_04 | 2001-06-26 | 57.43 | 17.10 | 4 | 1077.870 | 0.06 | 64.672 | 64.672 |
| Thjelvar2001-06-26_05 | 2001-06-26 | 57.46 | 17.27 | 4 | 1408.686 | 0.06 | 84.521 | 84.521 |
| Thjelvar2001-06-26_06 | 2001-06-26 | 57.49 | 17.46 | 4 | 558.252 | 0.06 | 33.495 | 33.495 |
| Thjelvar2001-06-26_07 | 2001-06-26 | 57.53 | 17.64 | 4 | 1804.854 | 0.06 | 108.291 | 108.291 |
| Thjelvar2001-06-26_08 | 2001-06-26 | 57.56 | 17.83 | 4 | 987.474 | 0.06 | 59.248 | 59.248 |
| Thjelvar2001-06-26_09 | 2001-06-26 | 57.59 | 18.00 | 4 | 168.600 | 0.06 | 10.116 | 10.116 |
| Thjelvar2001-07-31_01 | 2001-07-31 | 57.26 | 16.68 | 4 | 640.128 | 0.06 | 38.408 | 38.408 |
| Thjelvar2001-07-31_02 | 2001-07-31 | 57.31 | 16.82 | 4 | 281.640 | 0.06 | 16.898 | 16.898 |
| Thjelvar2001-07-31_03 | 2001-07-31 | 57.38 | 16.96 | 4 | 2223.534 | 0.06 | 133.412 | 133.412 |
| Thjelvar2001-07-31_04 | 2001-07-31 | 57.43 | 17.10 | 4 | 795.150 | 0.06 | 47.709 | 47.709 |
| Thjelvar2001-07-31_05 | 2001-07-31 | 57.46 | 17.27 | 4 | 1132.158 | 0.06 | 67.930 | 67.929 |
| Thjelvar2001-07-31_06 | 2001-07-31 | 57.49 | 17.46 | 4 | 1562.370 | 0.06 | 93.742 | 93.742 |
| Thjelvar2001-07-31_07 | 2001-07-31 | 57.53 | 17.64 | 4 | 252.606 | 0.06 | 15.156 | 15.156 |
| Thjelvar2001-07-31_08 | 2001-07-31 | 57.56 | 17.83 | 4 | 208.134 | 0.06 | 12.488 | 12.488 |
| Thjelvar2001-07-31_09 | 2001-07-31 | 57.59 | 18.00 | 4 | 181.932 | 0.06 | 10.916 | 10.916 |
| Thjelvar2001-08-16_01 | 2001-08-16 | 57.26 | 16.68 | 4 | 0.000 | 0.06 | 0.000 | 0.000 |
| Thjelvar2001-08-16_02 | 2001-08-16 | 57.31 | 16.82 | 4 | 125.532 | 0.06 | 7.532 | 7.532 |
| Thjelvar2001-08-16_03 | 2001-08-16 | 57.38 | 16.96 | 4 | 164.844 | 0.06 | 9.891 | 9.891 |
| Thjelvar2001-08-16_04 | 2001-08-16 | 57.43 | 17.10 | 4 | 244.326 | 0.06 | 14.660 | 14.660 |
| Thjelvar2001-08-16_05 | 2001-08-16 | 57.46 | 17.27 | 4 | 79.896 | 0.06 | 4.794 | 4.794 |
| Thjelvar2001-08-16_06 | 2001-08-16 | 57.49 | 17.46 | 4 | 59.616 | 0.06 | 3.577 | 3.577 |
| Thjelvar2001-08-16_07 | 2001-08-16 | 57.53 | 17.64 | 4 | 9.486 | 0.06 | 0.569 | 0.569 |
| Thjelvar2001-08-16_08 | 2001-08-16 | 57.56 | 17.83 | 4 | 8.448 | 0.06 | 0.507 | 0.507 |
| Thjelvar2001-08-16_09 | 2001-08-16 | 57.59 | 18.00 | 4 | 0.000 | 0.06 | 0.000 | 0.000 |
| Thjelvar2001-10-08_01 | 2001-10-08 | 57.26 | 16.68 | 4 | 6.246 | 0.06 | 0.375 | 0.375 |
| Thjelvar2001-10-08_02 | 2001-10-08 | 57.31 | 16.82 | 4 | 83.634 | 0.06 | 5.018 | 5.018 |
| Thjelvar2001-10-08_03 | 2001-10-08 | 57.38 | 16.96 | 4 | 12.402 | 0.06 | 0.744 | 0.744 |
| Thjelvar2001-10-08_04 | 2001-10-08 | 57.43 | 17.10 | 4 | 5.100 | 0.06 | 0.306 | 0.306 |
| Thjelvar2001-10-08_05 | 2001-10-08 | 57.46 | 17.27 | 4 | 13.122 | 0.06 | 0.787 | 0.787 |
| Thjelvar2001-10-08_06 | 2001-10-08 | 57.49 | 17.46 | 4 | 0.792 | 0.06 | 0.048 | 0.048 |
| Thjelvar2001-10-08_07 | 2001-10-08 | 57.53 | 17.64 | 4 | 0.000 | 0.06 | 0.000 | 0.000 |
| Thjelvar2001-10-08_08 | 2001-10-08 | 57.56 | 17.83 | 4 | 10.530 | 0.06 | 0.632 | 0.632 |
| Thjelvar2001-10-08_09 | 2001-10-08 | 57.59 | 18.00 | 4 | 2.154 | 0.06 | 0.129 | 0.129 |