Ayton, J; Aislabie, Jackie; Barker, Gary M; Saul, D; Turner, Simon (2010): (Table 2) Number of archaeal clones, and diversity of archaeal OTUs in soils obtained from the Ross Sea Region [dataset]. PANGAEA, https://doi.org/10.1594/PANGAEA.807146, In supplement to: Ayton, J et al. (2010): Crenarchaeota affiliated with group 1.1b are prevalent in coastal mineral soils of the Ross Sea region of Antarctica. Environmental Microbiology, 12(3), 689-703, https://doi.org/10.1111/j.1462-2920.2009.02111.x
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Coverage:
Median Latitude: -77.400000 * Median Longitude: 163.645833 * South-bound Latitude: -77.850000 * West-bound Longitude: 161.600000 * North-bound Latitude: -77.000000 * East-bound Longitude: 166.766670
Minimum DEPTH, sediment/rock: 0.005 m * Maximum DEPTH, sediment/rock: 0.750 m
Event(s):
Granite_Harbour * Latitude: -77.000000 * Longitude: 162.533330 * Elevation: 5.0 m * Location: Ross Sea Region, Antarctica * Method/Device: Sampling by hand (HAND)
Parameter(s):
| # | Name | Short Name | Unit | Principal Investigator | Method/Device | Comment |
|---|---|---|---|---|---|---|
| 1 | Event label | Event | ||||
| 2 | Latitude of event | Latitude | ||||
| 3 | Longitude of event | Longitude | ||||
| 4 | Elevation of event | Elevation | m | |||
| 5 | Description | Description | Ayton, J | |||
| 6 | Sample ID | Sample ID | Ayton, J | sample VV4 was collected from beneath a cyanobacterial mat on the shore of the lake below the Victoria Upper Glacier | ||
| 7 | Depth, top/min | Depth top | m | Ayton, J | ||
| 8 | Depth, bottom/max | Depth bot | m | Ayton, J | ||
| 9 | DEPTH, sediment/rock | Depth sed | m | Geocode | ||
| 10 | Number of clones | Clones | # | Ayton, J | Fluorescence in situ hybridization (FISH) | |
| 11 | Archaea, operational taxonomic unit | A OTU | # | Ayton, J | Fluorescence in situ hybridization (FISH) | no. of unique OTUs |
| 12 | Number | No | Ayton, J | Fluorescence in situ hybridization (FISH) | of singletons | |
| 13 | Index | Index | Ayton, J | OTU dominance, Berger-Parker Index | ||
| 14 | Archaea, richness of taxonomic units | Arch div | # | Ayton, J | S(chao1) | |
| 15 | Shannon Diversity Index | H' | Ayton, J | |||
| 16 | Fraction | Fraction | Ayton, J | sample coverage (Good's) |
License:
Creative Commons Attribution 3.0 Unported (CC-BY-3.0)
Size:
198 data points
Data
| 1 Event | 2 Latitude | 3 Longitude | 4 Elevation [m] | 5 Description | 6 Sample ID | 7 Depth top [m] | 8 Depth bot [m] | 9 Depth sed [m] | 10 Clones [#] | 11 A OTU [#] | 12 No | 13 Index | 14 Arch div [#] | 15 H' | 16 Fraction |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Scott_Base | -77.8500 | 166.7667 | 38 | Ross Island | SB | 0.00 | 0.01 | 0.005 | 73 | 6 | 1 | 0.49 | 7 | 1.16 | 0.99 |
| Scott_Base | -77.8500 | 166.7667 | 38 | Ross Island | SB | 0.01 | 0.07 | 0.040 | 78 | 5 | 3 | 0.58 | 10 | 0.85 | 0.96 |
| Scott_Base | -77.8500 | 166.7667 | 38 | Ross Island | SB | 0.07 | 0.15 | 0.110 | 76 | 5 | 2 | 0.70 | 6 | 0.81 | 0.97 |
| Scott_Base | -77.8500 | 166.7667 | 38 | Ross Island | SB | 0.15 | 0.30 | 0.225 | 67 | 3 | 1 | 0.76 | 4 | 0.61 | 0.98 |
| Marble_Point | -77.4167 | 163.6833 | 50 | Coastal Mainland | MP | 0.00 | 0.03 | 0.015 | 87 | 7 | 3 | 0.46 | 9 | 1.26 | 0.97 |
| Marble_Point | -77.4167 | 163.6833 | 50 | Coastal Mainland | MP | 0.03 | 0.10 | 0.065 | 89 | 5 | 3 | 0.92 | 10 | 0.37 | 0.97 |
| Marble_Point | -77.4167 | 163.6833 | 50 | Coastal Mainland | MP | 0.15 | 0.32 | 0.235 | 89 | 6 | 3 | 0.87 | 8 | 0.57 | 0.97 |
| Granite_Harbour | -77.0000 | 162.5333 | 5 | Coastal Mainland | GH | 0.02 | 0.05 | 0.035 | 79 | 8 | 4 | 0.77 | 16 | 0.91 | 0.95 |
| Granite_Harbour | -77.0000 | 162.5333 | 5 | Coastal Mainland | GH | 0.05 | 0.10 | 0.075 | 86 | 9 | 4 | 0.63 | 17 | 1.22 | 0.95 |
| Granite_Harbour | -77.0000 | 162.5333 | 5 | Coastal Mainland | GH | 0.10 | 0.20 | 0.150 | 84 | 12 | 9 | 0.73 | 53 | 1.12 | 0.89 |
| Granite_Harbour | -77.0000 | 162.5333 | 5 | Coastal Mainland | GH | 0.20 | 0.30 | 0.250 | 83 | 11 | 4 | 0.72 | 13 | 1.17 | 0.95 |
| Granite_Harbour | -77.0000 | 162.5333 | 5 | Coastal Mainland | GH | 0.30 | 0.40 | 0.350 | 85 | 10 | 3 | 0.76 | 11 | 1.02 | 0.96 |
| Granite_Harbour | -77.0000 | 162.5333 | 5 | Coastal Mainland | GH | 0.40 | 0.50 | 0.450 | 80 | 7 | 3 | 0.66 | 12 | 1.10 | 0.96 |
| Granite_Harbour | -77.0000 | 162.5333 | 5 | Coastal Mainland | GH | 0.50 | 0.60 | 0.550 | 83 | 13 | 8 | 0.58 | 28 | 1.49 | 0.90 |
| Granite_Harbour | -77.0000 | 162.5333 | 5 | Coastal Mainland | GH | 0.60 | 0.70 | 0.650 | 81 | 11 | 7 | 0.52 | 36 | 1.43 | 0.91 |
| Granite_Harbour | -77.0000 | 162.5333 | 5 | Coastal Mainland | GH | 0.70 | 0.80 | 0.750 | 86 | 7 | 3 | 0.76 | 12 | 0.91 | 0.97 |
| Victoria_Valley | -77.3333 | 161.6000 | 412 | Dry Valleys | VV | 0.02 | 0.08 | 0.050 | 70 | 6 | 0 | 0.69 | 6 | 1.06 | 1.00 |
| Victoria_Valley | -77.3333 | 161.6000 | 412 | Dry Valleys | VV4 | 0.00 | 0.10 | 0.050 | 76 | 6 | 2 | 0.79 | 8 | 0.80 | 0.97 |