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Hein, James R; Mizell, Kira; Barnard, Patrick L (2013): Mineralogical compositions of sediment samples from the San Francisco Bay coastal system [dataset]. PANGAEA, https://doi.org/10.1594/PANGAEA.803903, Supplement to: Hein, JR et al. (2013): Sand sources and transport pathways for the San Francisco Bay coastal system, based on X-ray diffraction mineralogy. Marine Geology, 345, 154-169, https://doi.org/10.1016/j.margeo.2013.04.003

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Abstract:
The mineralogical compositions of 119 samples collected from throughout the San Francisco Bay coastal system, including bayfloor and seafloor, area beaches, cliff outcrops, and major drainages, were determined using X-ray diffraction (XRD). Comparison of the mineral concentrations and application of statistical cluster analysis of XRD spectra allowed for the determination of provenances and transport pathways. The use of XRD mineral identifications provides semi-quantitative compositions needed for comparisons of beach and offshore sands with potential cliff and river sources, but the innovative cluster analysis of XRD diffraction spectra provides a unique visualization of how groups of samples within the San Francisco Bay coastal system are related so that sand-sized sediment transport pathways can be inferred.
The main vector for sediment transport as defined by the XRD analysis is from San Francisco Bay to the outer coast, where the sand then accumulates on the ebb tidal delta and also moves alongshore. This mineralogical link defines a critical pathway because large volumes of sediment have been removed from the Bay over the last century via channel dredging, aggregate mining, and borrow pit mining, with comparable volumes of erosion from the ebb tidal delta over the same period, in addition to high rates of shoreline retreat along the adjacent, open-coast beaches. Therefore, while previously only a temporal relationship was established, the transport pathway defined by mineralogical and geochemical tracers support the link between anthropogenic activities in the Bay and widespread erosion outside the Bay. The XRD results also establish the regional and local importance of sediment derived from cliff erosion, as well as both proximal and distal fluvial sources. This research is an important contribution to a broader provenance study aimed at identifying the driving forces for widespread geomorphic change in a heavily urbanized coastal-estuarine system.
Related to:
Barnard, Patrick L; Foxgrover, Amy C; Elias, Edwin; Erikson, Li H; Hein, James R; McGann, Mary L; Mizell, Kira; Rosenbauer, Robert J; Swarzenski, Peter W; Takesue, Renee K; Wong, Florence L; Woodrow, Donald L (2013): Integration of bed characteristics, geochemical tracers, current measurements, and numerical modeling for assessing the provenance of beach sand in the San Francisco Bay Coastal System. Marine Geology, 336, 120-145, https://doi.org/10.1016/j.margeo.2012.11.008
Barnard, Patrick L; Foxgrover, Amy C; Elias, Edwin; Erikson, Li H; Hein, James R; McGann, Mary L; Mizell, Kira; Rosenbauer, Robert J; Swarzenski, Peter W; Takesue, Renee K; Wong, Florence L; Woodrow, Donald L (2013): Integration of bed characteristics, geochemical tracers, current measurements, and numerical modeling for assessing the provenance of beach sand in the San Francisco Bay Coastal System. Marine Geology, 345, 181-206, https://doi.org/10.1016/j.margeo.2013.08.007
Coverage:
Median Latitude: 37.840059 * Median Longitude: -122.468750 * South-bound Latitude: 37.380000 * West-bound Longitude: -123.053630 * North-bound Latitude: 38.562800 * East-bound Longitude: -121.308360
Date/Time Start: 2010-01-23T00:00:00 * Date/Time End: 2012-03-09T00:00:00
Minimum DEPTH, sediment/rock: m * Maximum DEPTH, sediment/rock: m
Event(s):
BRP02  * Latitude: 37.823730 * Longitude: -122.612070 * Date/Time: 2010-03-19T00:00:00 * Recovery: 0.1 m * Location: San Francisco Bay, California * Campaign: S-8-10-SF * Basis: Parke Snavely * Method/Device: Grab (GRAB)
BRP04  * Latitude: 37.786380 * Longitude: -122.645850 * Date/Time: 2010-03-19T00:00:00 * Recovery: 0.1 m * Location: San Francisco Bay, California * Campaign: S-8-10-SF * Basis: Parke Snavely * Method/Device: Grab (GRAB)
BRP06  * Latitude: 37.806540 * Longitude: -122.599360 * Date/Time: 2010-03-19T00:00:00 * Recovery: 0.1 m * Location: San Francisco Bay, California * Campaign: S-8-10-SF * Basis: Parke Snavely * Method/Device: Grab (GRAB)
Comment:
The mineralogical compositions of the sand-sized fraction of 119 total beach, offshore grab, cliff outcrop, and river/streambed samples throughout the San Francisco Bay coastal system were determined using X-ray diffraction (XRD). All sediment sample analyses were done on a consistent size fraction, 0.15 - 0.5 mm (mean D10-D90 range of beach samples), after shell was removed by weak hydrochloric acid leach. Potential source rocks were analyzed in bulk. All samples were ground in a McCrone micronizing mill with 4 ml of methanol for 5 min. The ground mixture was then dried at 80° C overnight, and the resulting powder was ground with a mortar and pestle to fit through a 106 mm sieve and back-packed into an aluminum sample holder to ensure randomization. Samples were analyzed using a Philips XRD with graphite monochromator at 40 kv and 45 mA. Step scans were run from 5° to 65° 2-theta with 0.02° steps, using CuKa radiation and a count time of 2 s/step. XRD digital scan data were analyzed using Philips X'Pert High Score search and match function to identify peaks and mineral composition. Semi-quantitative mineral percentages were determined by multiplying unique peak intensities for each mineral in a sample by relative intensity factors as described by Cook et al. (1975) and the products for all minerals in a sample were then summed to 100%. Intensity factors were estimated for minerals not found in Cook et al. (1975).
Size:
2737 data points

Data

Download dataset as tab-delimited text — use the following character encoding:


Event

Latitude

Longitude

Area

Description

Depth sed [m]

Qz [%]

Pl [%]

Kfs [%]
10 
Chl [%]
11 
Ill+mica [%]
12 
Pyrox [%]
13 
Amp [%]
14 
Kln [%]
15 
Srp [%]
16 
Hem [%]
17 
Cal [%]
18 
Fe3O4 [%]
19 
Pyroaurite [%]
20 
Ep [%]
21 
Sep [%]
22 
Rt [%]
23 
Trd [%]
24 
Py [%]
25 
Tlc [%]
26 
Gth [%]
27 
Ilm [%]
BRP02 37.82373-122.61207N. CoastOffshore064.630.40.01.92.00.01.10.00.00.00.00.00.00.00.00.0000.00.00.0
BRP04 37.78638-122.64585GGBOffshore042.220.230.40.01.34.30.60.01.00.00.00.00.00.00.00.0000.00.00.0
BRP06 37.80654-122.59936N. CoastOffshore045.816.130.70.00.95.30.30.90.00.00.00.00.00.00.00.0000.00.00.0
BRP08 37.82163-122.55707N. CoastOffshore051.423.715.21.20.76.41.40.00.00.00.00.00.00.00.00.0000.00.00.0
BRP10 37.77638-122.60646GGBOffshore051.623.317.70.81.55.10.00.00.00.00.00.00.00.00.00.0000.00.00.0
BRP12 37.79070-122.56386GGBOffshore061.217.714.80.00.06.00.00.30.00.00.00.00.00.00.00.0000.00.00.0
BRP14 37.75078-122.58888S. CoastOffshore064.324.30.01.11.27.71.40.00.00.00.00.00.00.00.00.0000.00.00.0
BRP16 37.77161-122.54905S. CoastOffshore061.517.715.40.00.05.10.00.30.00.00.00.00.00.00.00.0000.00.00.0
BRP18 37.73173-122.57645S. CoastOffshore061.826.60.00.01.47.71.11.40.00.00.00.00.00.00.00.0000.00.00.0
BRP19 37.73924-122.55322S. CoastOffshore060.029.50.01.31.37.30.60.00.00.00.00.00.00.00.00.0000.00.00.0
CBP05 37.81523-122.47079GGBBay060.118.914.40.00.05.90.30.30.00.00.00.00.00.00.00.0000.00.00.0
CBP07 37.80840-122.46428GGBBay052.314.428.00.00.05.10.00.20.00.00.00.00.00.00.00.0000.00.00.0
CBP09 37.84242-122.46487GGBBay060.128.10.00.01.78.21.01.00.00.00.00.00.00.00.00.0000.00.00.0
CBP11 37.82378-122.46077GGBBay060.829.10.00.01.67.30.60.60.00.00.00.00.00.00.00.0000.00.00.0
CBP15 37.84142-122.45221GGBBay063.128.50.00.00.07.40.50.60.00.00.00.00.00.00.00.0000.00.00.0
CBP19 37.80966-122.44835GGBBay060.536.40.00.01.70.00.01.40.00.00.00.00.00.00.00.0000.00.00.0
CBP25 37.83179-122.43674GGBBay055.219.517.20.00.76.40.60.40.00.00.00.00.00.00.00.0000.00.00.0
CBP26 37.82347-122.43744GGBBay055.919.817.90.00.06.00.20.30.00.00.00.00.00.00.00.0000.00.00.0
CBP28 37.81153-122.43782GGBBay063.327.80.00.01.46.40.01.00.00.00.00.00.00.00.00.0000.00.00.0
CBP31 37.82962-122.43069GGBBay055.720.017.30.00.06.20.50.20.00.00.00.00.00.00.00.0000.00.00.0
CBP33 37.81576-122.42488GGBBay060.717.914.50.00.46.20.00.30.00.00.00.00.00.00.00.0000.00.00.0
CBP34 37.84603-122.42117BayBay062.633.70.00.02.50.00.01.20.00.00.00.00.00.00.00.0000.00.00.0
CBP37 37.86439-122.41187BayBay060.229.80.00.01.76.70.01.50.00.00.00.00.00.00.00.0000.00.00.0
CBP41 37.81988-122.39382BayBay061.117.216.60.00.04.90.00.20.00.00.00.00.00.00.00.0000.00.00.0
CBP42 37.87290-122.44054BayBay063.125.70.00.01.48.20.51.00.00.00.00.00.00.00.00.0000.00.00.0
CBP46 37.91482-122.44659BayBay055.130.60.01.42.19.01.70.00.00.00.00.00.00.00.00.0000.00.00.0
CR_01 37.95200-122.31900SourceStream072.819.50.00.00.07.00.00.70.00.00.00.00.00.00.00.0000.00.00.0
CR_03 38.44100-122.39500SourceRiver047.618.927.50.01.04.50.00.50.00.00.00.00.00.00.00.0000.00.00.0
CR_04 38.26600-122.46700SourceRiver056.734.00.00.00.08.60.00.60.00.00.00.00.00.00.00.0000.00.00.0
CR_06B 37.90300-122.54300SourceStream072.120.10.00.02.24.50.01.20.00.00.00.00.00.00.00.0000.00.00.0
CR_07B 37.96200-122.55700SourceStream069.627.90.00.01.60.00.00.00.90.00.00.00.00.00.00.0000.00.00.0
CR_08 37.42500-122.19100SourceStream069.29.815.70.00.04.80.00.60.00.00.00.00.00.00.00.0000.00.00.0
CR_09 37.38000-121.93800SourceStream054.222.115.90.00.86.40.00.60.00.00.00.00.00.00.00.0000.00.00.0
CR_10 37.57800-121.96900SourceStream072.020.30.00.01.15.20.01.50.00.00.00.00.00.00.00.0000.00.00.0
CR_11A1 37.56900-121.86500SourceStream071.324.10.01.92.70.00.00.00.00.00.00.00.00.00.00.0000.00.00.0
CR_15A 38.49935-122.99903SourceRiver068.521.10.01.01.86.00.00.01.60.00.00.00.00.00.00.0000.00.00.0
CR_15B 38.46125-123.05363SourceRiver066.620.80.01.32.06.80.60.01.90.00.00.00.00.00.00.0000.00.00.0
GGP01 37.78569-122.51949GGBBay051.016.727.20.00.04.80.00.40.00.00.00.00.00.00.00.0000.00.00.0
GGP03 37.80571-122.51949GGBBay055.016.827.70.00.00.00.00.50.00.00.00.00.00.00.00.0000.00.00.0
GGP08 37.79117-122.50041GGBBay049.817.631.10.00.80.00.00.70.00.00.00.00.00.00.00.0000.00.00.0
GGP09 37.82087-122.51332GGBBay061.429.60.00.00.07.90.01.00.00.00.00.00.00.00.00.0000.00.00.0
GGP11 37.80681-122.50385GGBBay057.614.527.20.00.00.00.40.30.00.00.00.00.00.00.00.0000.00.00.0
GGP12 37.80136-122.49983GGBBay060.317.716.40.00.05.30.00.30.00.00.00.00.00.00.00.0000.00.00.0
GGP15 37.79812-122.48536GGBBay052.116.226.20.00.05.00.00.60.00.00.00.00.00.00.00.0000.00.00.0
OSP01 38.03457-123.00573N. CoastNear Shore079.316.60.00.00.04.10.00.00.00.00.00.00.00.00.00.0000.00.00.0
OSP03 38.00262-123.02454N. CoastNear Shore076.218.60.00.00.05.20.00.00.00.00.00.00.00.00.00.0000.00.00.0
OSP05 37.98231-122.96114N. CoastNear Shore044.716.426.90.06.35.50.00.30.00.00.00.00.00.00.00.0000.00.00.0
OSP07 38.02540-122.95541N. CoastNear Shore057.915.522.60.00.04.00.00.00.00.00.00.00.00.00.00.0000.00.00.0
OSP13 37.97768-122.80806N. CoastNear Shore065.811.818.10.00.04.20.00.00.00.00.00.00.00.00.00.0000.00.00.0
OSP18 37.91463-122.73970N. CoastNear Shore062.512.319.30.00.05.90.00.00.00.00.00.00.00.00.00.0000.00.00.0
OSP22 37.89901-122.65687N. CoastNear Shore051.616.424.60.00.06.60.00.80.00.00.00.00.00.00.00.0000.00.00.0
OSP25 37.85441-122.58480N. CoastNear Shore064.126.70.01.32.15.80.00.00.00.00.00.00.00.00.00.0000.00.00.0
OSP28 37.73446-122.51382S. CoastNear Shore067.522.90.00.00.57.11.40.60.00.00.00.00.00.00.00.0000.00.00.0
OSP31 37.69658-122.50303S. CoastNear Shore058.817.916.00.00.45.90.60.30.00.00.00.00.00.00.00.0000.00.00.0
OSP35 37.63870-122.49811S. CoastNear Shore056.319.414.80.00.08.21.00.20.00.00.00.00.00.00.00.0000.00.00.0
OSP38 37.60206-122.51579S. CoastNear Shore043.424.030.70.00.90.00.00.01.00.00.00.00.00.00.00.0000.00.00.0
OSP39 37.58324-122.51948S. CoastNear Shore052.032.30.00.07.76.70.00.01.30.00.00.00.00.00.00.0000.00.00.0
SAC01 38.56280-121.51916SourceRiver061.326.70.02.22.56.60.70.00.00.00.00.00.00.00.00.0000.00.00.0
SBP02 37.76467-122.35823BayBay057.315.721.80.00.04.40.70.20.00.00.00.00.00.00.00.0000.00.00.0
SBP06 37.69822-122.33806BayBay071.420.70.01.41.45.10.00.00.00.00.00.00.00.00.00.0000.00.00.0
SBP13 37.63531-122.31331BayBay071.522.50.00.71.44.00.00.00.00.00.00.00.00.00.00.0000.00.00.0
SBP18 37.65433-122.24020BayBay055.919.20.00.014.17.00.03.80.00.00.00.00.00.00.00.0000.00.00.0
SBP21 37.57989-122.24498BayBay063.823.60.00.03.65.90.60.02.40.00.00.00.00.00.00.0000.00.00.0
SBP25 37.50830-122.12168BayBay067.922.70.00.01.56.90.01.00.00.00.00.00.00.00.00.0000.00.00.0
SFPBCH05 37.66967-122.16516BayBeach Sediment078.814.80.00.00.06.50.00.00.00.00.00.00.00.00.00.0000.00.00.0
SFPBCH06 37.85162-122.30038BayBeach Sediment073.719.70.00.00.06.60.00.00.00.00.00.00.00.00.00.0000.00.00.0
SFPBCH07 37.82537-122.31740BayBeach Sediment078.015.90.00.00.06.10.00.00.00.00.00.00.00.00.00.0000.00.00.0
SFPBCH09 37.99837-122.36547BayBeach Sediment079.219.70.00.00.90.00.00.30.00.00.00.00.00.00.00.0000.00.00.0
SFPBCH11 38.01440-122.29700BayBeach Sediment072.919.40.00.00.07.70.00.00.00.00.00.00.00.00.00.0000.00.00.0
SFPBCH13 37.90882-122.33897BayBeach Sediment066.813.914.70.00.04.60.00.00.00.00.00.00.00.00.00.0000.00.00.0
SFPBCH14 37.54601-122.51480S. CoastBeach Sediment051.939.50.00.00.07.40.60.60.00.00.00.00.00.00.00.0000.00.00.0
SFPBCH17 37.83070-122.53754N. CoastBeach Sediment074.817.10.00.00.07.70.00.40.00.00.00.00.00.00.00.0000.00.00.0
SFPBCH18 37.80651-122.45219GGBBeach Sediment056.024.60.00.00.016.02.90.50.00.00.00.00.00.00.00.0000.00.00.0
SFPBCH19 37.80685-122.46809GGBBeach Sediment059.125.70.00.80.012.51.90.00.00.00.00.00.00.00.00.0000.00.00.0
SFPBCH20 37.79277-122.48426GGBBeach Sediment067.023.20.00.00.08.90.60.40.00.00.00.00.00.00.00.0000.00.00.0
SFPBCH21 37.77498-122.51358S. CoastBeach Sediment068.323.10.00.00.07.60.50.50.00.00.00.00.00.00.00.0000.00.00.0
SFPBCH22 37.73566-122.50773S, CoastBeach Sediment02.02.05.70.00.00.00.00.00.027.30.061.20.00.00.01.8000.00.00.0
SFPBCH23 37.63422-122.49450S. CoastBeach Sediment038.218.90.00.00.040.41.90.00.00.00.00.00.00.80.00.0000.00.00.0
SFPBCH25 37.59820-122.50324S. CoastBeach Sediment064.429.30.00.00.05.80.00.50.00.00.00.00.00.00.00.0000.00.00.0
SFPBCH27 38.04856-122.98929N. CoastBeach Sediment081.814.60.00.00.03.60.00.00.00.00.00.00.00.00.00.0000.00.00.0
SFPBCH28 38.02521-122.88324N. CoastBeach Sediment068.114.513.20.00.04.00.00.20.00.00.00.00.00.00.00.0000.00.00.0
SFPBCH30 37.90499-122.68398N. CoastBeach Sediment067.013.119.80.00.00.00.00.00.00.00.00.00.00.00.00.0000.00.00.0
SFPBCH31 37.89952-122.64654N. CoastBeach Sediment061.813.019.50.00.05.80.00.00.00.00.00.00.00.00.00.0000.00.00.0
SFPBCH32 37.85921-122.57566N. CoastBeach Sediment061.717.514.00.00.85.20.00.80.00.00.00.00.00.00.00.0000.00.00.0
SFPBCH33 37.82439-122.50904GGBBeach Sediment026.520.026.03.90.023.50.00.00.00.00.00.00.00.00.00.0000.00.00.0
SFPBCH34 37.82685-122.48957GGBBeach Sediment085.47.60.00.00.06.50.00.50.00.00.00.00.00.00.00.0000.00.00.0
SFPBCH36 37.85979-122.42044BayBeach Sediment049.319.530.20.00.90.00.00.30.00.00.00.00.00.00.00.0000.00.00.0
SFPBCH38 38.00140-122.46162BayBeach Sediment076.321.40.00.01.90.00.00.40.00.00.00.00.00.00.00.0000.00.00.0
SFPBCH40 37.72099-122.50565S. CoastBeach Sediment044.422.90.00.00.025.16.90.70.00.00.00.00.00.00.00.0000.00.00.0
SFPBCH41 37.74532-122.50882S. CoastBeach Sediment02.86.00.00.00.013.52.40.00.022.70.041.40.00.00.00.0000.00.011.2
SFPBCH42 37.76002-122.51177S. CoastBeach Sediment033.423.50.01.30.016.110.90.00.010.70.04.20.00.00.00.0000.00.00.0
SFPCLF01 37.83995-122.48120SourceChert096.40.00.00.00.00.00.00.00.03.60.00.00.00.00.00.0000.00.00.0
SFPCLF02A 37.82010-122.53033SourceBasalt00.041.90.017.67.433.20.00.00.00.00.00.00.00.00.00.0000.00.00.0
SFPCLF02B 37.81920-122.53040SourceBasalt w/ Quartz055.837.70.02.44.00.00.00.00.00.00.00.00.00.00.00.0000.00.00.0
SFPCLF02C 37.81920-122.53040SourceBasalt00.044.50.04.70.034.70.00.00.00.016.10.00.00.00.00.0000.00.00.0
SFPCLF03 37.83198-122.54008SourceCoarse Sandstone057.630.40.00.012.00.00.00.00.00.00.00.00.00.00.00.0000.00.00.0
SFPCLF04 37.80197-122.47866SourceW. Serpetinite00.00.00.00.00.00.00.00.033.50.00.040.326.20.00.00.0000.00.00.0
SFPCLF05A 37.56733-122.51526SourceFresh Granite021.031.341.14.30.00.02.30.00.00.00.00.00.00.00.00.0000.00.00.0
SFPCLF05B 37.56733-122.51526SourceSemi-F. Granite042.341.20.07.50.09.00.00.00.00.00.00.00.00.00.00.0000.00.00.0
SFPCLF05C 37.56733-122.51526SourceW. Granite040.354.90.02.00.00.00.00.00.00.00.00.00.02.70.00.0000.00.00.0
SFPCLF06 37.99395-122.97376SourceGranite030.119.627.30.09.112.10.01.90.00.00.00.00.00.00.00.0000.00.00.0
SFPCLF07 37.99768-123.01188SourceW. Granite024.131.928.70.013.50.00.00.00.00.00.00.00.00.01.80.0000.00.00.0
SFPCLF08 38.02596-122.96235SourceFine Sandstone055.433.10.00.00.010.90.00.70.00.00.00.00.00.00.00.0000.00.00.0
SFPCLF09 37.72099-122.50553SourceSandstone051.719.20.00.00.09.43.00.70.00.00.016.00.00.00.00.0000.00.00.0
SFPCLF10 37.57845-122.51687SourceW. Granite043.540.30.05.44.20.00.00.00.00.05.70.00.00.00.00.0000.80.00.0
SFPCLF11A 37.57862-122.51692SourceSandstone040.128.215.01.04.26.30.00.00.00.05.20.00.00.00.00.0000.00.00.0
SFPCLF13 37.78090-122.51362SourceSandstone032.130.20.00.05.67.00.01.80.00.00.03.80.00.00.00.0000.019.50.0
SFPCLF14 37.78132-122.51412SourceSandstone032.833.10.00.01.96.10.01.60.00.00.02.50.00.00.00.0000.022.10.0
SFPCLF15 37.80413-122.46905SourceSandstone Bed045.335.80.01.06.79.20.00.00.00.02.00.00.00.00.00.0000.00.00.0
SJC02 37.78738-121.30836SourceRiver038.931.227.30.01.00.01.20.40.00.00.00.00.00.00.00.0000.00.00.0
SPP07 37.97509-122.43677BayBay041.419.330.40.82.15.30.70.00.00.00.00.00.00.00.00.0000.00.00.0
SPP12 38.04189-122.34540BayBay041.017.431.40.01.75.70.82.00.00.00.00.00.00.00.00.0000.00.00.0
SPP16 38.06178-122.26445BayBay046.617.533.40.01.20.00.60.50.00.00.00.00.00.00.00.0000.00.00.0
SSP01 38.06013-122.20863BayOffshore056.728.40.00.01.510.31.31.80.00.00.00.00.00.00.00.0000.00.00.0
SSP04 38.04237-122.12530BayOffshore036.619.234.91.11.16.60.50.00.00.00.00.00.00.00.00.0000.00.00.0
SSP07 38.09251-122.07089BayOffshore051.931.50.00.02.111.01.81.70.00.00.00.00.00.00.00.0000.00.00.0
SSP11 38.06494-122.03528BayOffshore054.831.10.00.81.710.51.10.00.00.00.00.00.00.00.00.0000.00.00.0
SSP17 38.04551-121.90838BayOffshore045.625.316.50.71.69.40.90.00.00.00.00.00.00.00.00.0000.00.00.0
SSP19 38.06333-121.85526BayOffshore061.226.70.00.71.28.91.30.00.00.00.00.00.00.00.00.0000.00.00.0