Not logged in
PANGAEA.
Data Publisher for Earth & Environmental Science

Raupach, Michael R; Malyutina, Marina; Brandt, Angelika; Wägele, Johann-Wolfgang (2007): (Table 1) Individual codes, haplotype codes, GenBank accession numbers for DNA sequences and sample locality of the analysed Betamorpha fusiformis specimens from the ANDEEP III expedition [dataset]. PANGAEA, https://doi.org/10.1594/PANGAEA.786505, Supplement to: Raupach, MR et al. (2007): Molecular data reveal a highly diverse species flock within the munnopsoid deep-sea isopod Betamorpha fusiformis (Barnard, 1920) (Crustacea: Isopoda: Asellota) in the Southern Ocean. Deep Sea Research Part II: Topical Studies in Oceanography, 54(16-17), 1820-1830, https://doi.org/10.1016/j.dsr2.2007.07.009

Always quote citation above when using data! You can download the citation in several formats below.

RIS CitationBibTeX CitationShow MapGoogle Earth

Abstract:
Based on our current knowledge about population genetics, phylogeography and speciation, we begin to understand that the deep sea harbours more species than suggested in the past. Deep-sea soft-sediment environment in particular hosts a diverse and highly endemic invertebrate fauna. Very little is known about evolutionary processes that generate this remarkable species richness, the genetic variability and spatial distribution of deep-sea animals. In this study, phylogeographic patterns and the genetic variability among eight populations of the abundant and widespread deep-sea isopod morphospecies Betamorpha fusiformis [Barnard, K.H., 1920. Contributions to the crustacean fauna of South Africa. 6. Further additions to the list of marine isopods. Annals of the South African Museum 17, 319-438] were examined. A fragment of the mitochondrial 16S rRNA gene of 50 specimens and the complete nuclear 18S rRNA gene of 7 specimens were sequenced. The molecular data reveal high levels of genetic variability of both genes between populations, giving evidence for distinct monophyletic groups of haplotypes with average p-distances ranging from 0.0470 to 0.1440 (d-distances: 0.0592-0.2850) of the 16S rDNA, and 18S rDNA p-distances ranging between 0.0032 and 0.0174 (d-distances: 0.0033-0.0195). Intermediate values are absent. Our results show that widely distributed benthic deep-sea organisms of a homogeneous phenotype can be differentiated into genetically highly divergent populations. Sympatry of some genotypes indicates the existence of cryptic speciation. Flocks of closely related but genetically distinct species probably exist in other widespread benthic deep-sea asellotes and other Peracarida. Based on existing data we hypothesize that many widespread morphospecies are complexes of cryptic biological species (patchwork hypothesis).
Coverage:
Median Latitude: -61.445094 * Median Longitude: -21.477644 * South-bound Latitude: -71.305900 * West-bound Longitude: -50.639500 * North-bound Latitude: -41.116500 * East-bound Longitude: 9.914700
Date/Time Start: 2005-01-26T09:35:00 * Date/Time End: 2005-03-15T02:44:00
Minimum Elevation: -4895.0 m * Maximum Elevation: -1030.0 m
Event(s):
PS67/016-10  * Latitude Start: -41.117700 * Longitude Start: 9.914700 * Latitude End: -41.116500 * Longitude End: 9.912600 * Date/Time Start: 2005-01-26T09:35:00 * Date/Time End: 2005-01-26T09:45:00 * Elevation Start: -4687.0 m * Elevation End: -4669.0 m * Campaign: ANT-XXII/3 (PS67 ANDEEP 3) * Basis: Polarstern * Method/Device: Epibenthic sledge (EBS)
PS67/021-7  * Latitude Start: -47.645400 * Longitude Start: 4.253300 * Latitude End: -47.643100 * Longitude End: 4.251200 * Date/Time Start: 2005-01-29T17:18:00 * Date/Time End: 2005-01-29T17:28:00 * Elevation Start: -4555.0 m * Elevation End: -4552.0 m * Campaign: ANT-XXII/3 (PS67 ANDEEP 3) * Basis: Polarstern * Method/Device: Epibenthic sledge (EBS)
PS67/074-6  * Latitude Start: -71.305900 * Longitude Start: -13.961900 * Latitude End: -71.304700 * Longitude End: -13.955200 * Date/Time Start: 2005-02-20T15:58:00 * Date/Time End: 2005-02-20T16:08:00 * Elevation Start: -1030.0 m * Elevation End: -1040.0 m * Campaign: ANT-XXII/3 (PS67 ANDEEP 3) * Basis: Polarstern * Method/Device: Epibenthic sledge (EBS)
Parameter(s):
#NameShort NameUnitPrincipal InvestigatorMethod/DeviceComment
Event labelEvent
Area/localityAreaRaupach, Michael R
Date/Time of eventDate/Time
Latitude of eventLatitude
Longitude of eventLongitude
Latitude of event 2Latitude 2
Longitude of event 2Longitude 2
Elevation of eventElevationm
Elevation of event 2Elevation 2m
10 Individual codeIndividual codeRaupach, Michael R
11 Haplotype groupHaplotype grRaupach, Michael R
12 Database accession numberAccession noRaupach, Michael RGenBank 16S rDNA
13 Uniform resource locator/link to fileURL fileRaupach, Michael RGenBank 16S rDNA
14 Database accession numberAccession noRaupach, Michael RGenBank 18S rDNA
15 Uniform resource locator/link to fileURL fileRaupach, Michael RGenBank 18S rDNA
Size:
264 data points

Data

Download dataset as tab-delimited text — use the following character encoding:


Event

Area

Date/Time

Latitude

Longitude

Latitude 2

Longitude 2

Elevation [m]

Elevation 2 [m]
10 
Individual code
11 
Haplotype gr
12 
Accession no
(GenBank 16S rDNA)
13 
URL file
(GenBank 16S rDNA)
14 
Accession no
(GenBank 18S rDNA)
15 
URL file
(GenBank 18S rDNA)
PS67/016-10 Cape Basin2005-01-26T09:35-41.11779.9147-41.11659.9126-4687-4669BF7AEF116524ncbi.nlm.nih.govEF116546ncbi.nlm.nih.gov
PS67/016-10Cape Basin2005-01-26T09:35-41.11779.9147-41.11659.9126-4687-4669BF9AEF116525ncbi.nlm.nih.gov
PS67/016-10Cape Basin2005-01-26T09:35-41.11779.9147-41.11659.9126-4687-4669BF10AEF116526ncbi.nlm.nih.gov
PS67/016-10Cape Basin2005-01-26T09:35-41.11779.9147-41.11659.9126-4687-4669BF11AEF116527ncbi.nlm.nih.gov
PS67/016-10Cape Basin2005-01-26T09:35-41.11779.9147-41.11659.9126-4687-4669BF12AEF116528ncbi.nlm.nih.gov
PS67/016-10Cape Basin2005-01-26T09:35-41.11779.9147-41.11659.9126-4687-4669BF138CEF116535ncbi.nlm.nih.gov
PS67/016-10Cape Basin2005-01-26T09:35-41.11779.9147-41.11659.9126-4687-4669BF139FEF116523ncbi.nlm.nih.gov
PS67/021-7 Angulhas Basin2005-01-29T17:18-47.64544.2533-47.64314.2512-4555-4552BF20FEF116520ncbi.nlm.nih.govEF116542ncbi.nlm.nih.gov
PS67/021-7Angulhas Basin2005-01-29T17:18-47.64544.2533-47.64314.2512-4555-4552BF21FEF116521ncbi.nlm.nih.gov
PS67/021-7Angulhas Basin2005-01-29T17:18-47.64544.2533-47.64314.2512-4555-4552BF22FEF116522ncbi.nlm.nih.gov
PS67/074-6 Kapp Norvegia2005-02-20T15:58-71.3059-13.9619-71.3047-13.9552-1030-1040BF57BEF116529ncbi.nlm.nih.govEF116547ncbi.nlm.nih.gov
PS67/074-6Kapp Norvegia2005-02-20T15:58-71.3059-13.9619-71.3047-13.9552-1030-1040BF58BEF116530ncbi.nlm.nih.gov
PS67/074-6Kapp Norvegia2005-02-20T15:58-71.3059-13.9619-71.3047-13.9552-1030-1040BF59BEF116531ncbi.nlm.nih.gov
PS67/074-6Kapp Norvegia2005-02-20T15:58-71.3059-13.9619-71.3047-13.9552-1030-1040BF60BEF116532ncbi.nlm.nih.gov
PS67/080-9 Explora Escarpment2005-02-23T02:27-70.6513-14.7227-70.6537-14.7231-3103-3102BF91DEF116533ncbi.nlm.nih.govEF116548ncbi.nlm.nih.gov
PS67/080-9Explora Escarpment2005-02-23T02:27-70.6513-14.7227-70.6537-14.7231-3103-3102BF94DEF116534ncbi.nlm.nih.gov
PS67/094-11 Weddell Sea2005-03-02T13:15-66.6273-27.1461-66.6360-27.0802-4894-4895BF81EEF116541ncbi.nlm.nih.gov
PS67/094-11Weddell Sea2005-03-02T13:15-66.6273-27.1461-66.6360-27.0802-4894-4895BF160GEF116501ncbi.nlm.nih.gov
PS67/094-11Weddell Sea2005-03-02T13:15-66.6273-27.1461-66.6360-27.0802-4894-4895BF162GEF116502ncbi.nlm.nih.gov
PS67/094-11Weddell Sea2005-03-02T13:15-66.6273-27.1461-66.6360-27.0802-4894-4895BF163EEF116539ncbi.nlm.nih.gov
PS67/094-11Weddell Sea2005-03-02T13:15-66.6273-27.1461-66.6360-27.0802-4894-4895BF164EEF116540ncbi.nlm.nih.gov
PS67/102-13 Weddell Sea2005-03-06T23:06-65.5719-36.5219-65.5733-36.5179-4805-4803BF186GEF116510ncbi.nlm.nih.govEF116543ncbi.nlm.nih.gov
PS67/102-13Weddell Sea2005-03-06T23:06-65.5719-36.5219-65.5733-36.5179-4805-4803BF187GEF116511ncbi.nlm.nih.gov
PS67/102-13Weddell Sea2005-03-06T23:06-65.5719-36.5219-65.5733-36.5179-4805-4803BF188GEF116512ncbi.nlm.nih.gov
PS67/102-13Weddell Sea2005-03-06T23:06-65.5719-36.5219-65.5733-36.5179-4805-4803BF189GEF116514ncbi.nlm.nih.gov
PS67/102-13Weddell Sea2005-03-06T23:06-65.5719-36.5219-65.5733-36.5179-4805-4803BF190GEF116513ncbi.nlm.nih.gov
PS67/102-13Weddell Sea2005-03-06T23:06-65.5719-36.5219-65.5733-36.5179-4805-4803BF191GEF116515ncbi.nlm.nih.gov
PS67/102-13Weddell Sea2005-03-06T23:06-65.5719-36.5219-65.5733-36.5179-4805-4803BF192GEF116516ncbi.nlm.nih.gov
PS67/102-13Weddell Sea2005-03-06T23:06-65.5719-36.5219-65.5733-36.5179-4805-4803BF193GEF116517ncbi.nlm.nih.gov
PS67/102-13Weddell Sea2005-03-06T23:06-65.5719-36.5219-65.5733-36.5179-4805-4803BF194GEF116518ncbi.nlm.nih.gov
PS67/102-13Weddell Sea2005-03-06T23:06-65.5719-36.5219-65.5733-36.5179-4805-4803BF195GEF116519ncbi.nlm.nih.gov
PS67/102-13Weddell Sea2005-03-06T23:06-65.5719-36.5219-65.5733-36.5179-4805-4803BF196GEF116493ncbi.nlm.nih.gov
PS67/102-13Weddell Sea2005-03-06T23:06-65.5719-36.5219-65.5733-36.5179-4805-4803BF197GEF116509ncbi.nlm.nih.gov
PS67/102-13Weddell Sea2005-03-06T23:06-65.5719-36.5219-65.5733-36.5179-4805-4803BF225GEF116508ncbi.nlm.nih.gov
PS67/110-8 Weddell Sea2005-03-10T15:20-65.0087-43.0348-65.0113-43.0359-4698-4696BF204GEF116495ncbi.nlm.nih.govEF116544ncbi.nlm.nih.gov
PS67/110-8Weddell Sea2005-03-10T15:20-65.0087-43.0348-65.0113-43.0359-4698-4696BF205GEF116498ncbi.nlm.nih.gov
PS67/110-8Weddell Sea2005-03-10T15:20-65.0087-43.0348-65.0113-43.0359-4698-4696BF206GEF116494ncbi.nlm.nih.gov
PS67/110-8Weddell Sea2005-03-10T15:20-65.0087-43.0348-65.0113-43.0359-4698-4696BF208GEF116496ncbi.nlm.nih.gov
PS67/110-8Weddell Sea2005-03-10T15:20-65.0087-43.0348-65.0113-43.0359-4698-4696BF210EEF116537ncbi.nlm.nih.govEF116545ncbi.nlm.nih.gov
PS67/110-8Weddell Sea2005-03-10T15:20-65.0087-43.0348-65.0113-43.0359-4698-4696BF211GEF116499ncbi.nlm.nih.gov
PS67/110-8Weddell Sea2005-03-10T15:20-65.0087-43.0348-65.0113-43.0359-4698-4696BF216EEF116538ncbi.nlm.nih.gov
PS67/110-8Weddell Sea2005-03-10T15:20-65.0087-43.0348-65.0113-43.0359-4698-4696BF229GEF116503ncbi.nlm.nih.gov
PS67/110-8Weddell Sea2005-03-10T15:20-65.0087-43.0348-65.0113-43.0359-4698-4696BF239GEF116504ncbi.nlm.nih.gov
PS67/110-8Weddell Sea2005-03-10T15:20-65.0087-43.0348-65.0113-43.0359-4698-4696BF246GEF116500ncbi.nlm.nih.gov
PS67/110-8Weddell Sea2005-03-10T15:20-65.0087-43.0348-65.0113-43.0359-4698-4696BF250GEF116505ncbi.nlm.nih.gov
PS67/110-8Weddell Sea2005-03-10T15:20-65.0087-43.0348-65.0113-43.0359-4698-4696BF251GEF116506ncbi.nlm.nih.gov
PS67/110-8Weddell Sea2005-03-10T15:20-65.0087-43.0348-65.0113-43.0359-4698-4696BF252GEF116497ncbi.nlm.nih.gov
PS67/110-8Weddell Sea2005-03-10T15:20-65.0087-43.0348-65.0113-43.0359-4698-4696BF253GEF116507ncbi.nlm.nih.gov
PS67/110-8Weddell Sea2005-03-10T15:20-65.0087-43.0348-65.0113-43.0359-4698-4696BF254EEF116536ncbi.nlm.nih.gov
PS67/121-10 Weddell Sea2005-03-15T02:34-63.6288-50.6349-63.6259-50.6395-2663-2659BF287GEF116492ncbi.nlm.nih.gov