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Gonzalez Bernat, Maria Jose (2011): Seawater carbonate chemistry echinoderm (Odontaster validus, Patiriella regularis and Arachnoides placenta) survival during experiments, 2011 [dataset]. PANGAEA, https://doi.org/10.1594/PANGAEA.778510, In supplement to: Gonzalez Bernat, MJ (2011): Ocean acidification and its potential effects on the early life-history of non-calcifying and calcifying echinoderm (Echinodermata) larvae. University of Otago, Department of Marine Science, https://hdl.handle.net/10523/1930

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Keyword(s):
Animalia; Arachnoides placenta; Benthic animals; Benthos; Bottles or small containers/Aquaria (<20 L); Coast and continental shelf; Deep-sea; Echinodermata; Laboratory experiment; Mortality/Survival; Odontaster validus; Patiriella regularis; Polar; Single species; Temperate; Tropical
Funding:
Seventh Framework Programme (FP7), grant/award no. 211384: European Project on Ocean Acidification
Sixth Framework Programme (FP6), grant/award no. 511106: European network of excellence for Ocean Ecosystems Analysis
Comment:
In order to allow full comparability with other ocean acidification data sets, the R package seacarb (Lavigne and Gattuso, 2011) was used to compute a complete and consistent set of carbonate system variables, as described by Nisumaa et al. (2010). In this dataset the original values were archived in addition with the recalculated parameters (see related PI).
Parameter(s):
#NameShort NameUnitPrincipal InvestigatorMethod/DeviceComment
SpeciesSpeciesGonzalez Bernat, Maria Jose
Experiment dayExp daydayGonzalez Bernat, Maria Jose
SalinitySalGonzalez Bernat, Maria Jose
Salinity, standard deviationSal std dev±Gonzalez Bernat, Maria Jose
Temperature, waterTemp°CGonzalez Bernat, Maria Jose
Temperature, standard deviationT std dev±Gonzalez Bernat, Maria Jose
pHpHGonzalez Bernat, Maria JosepH meter CG 837NBS scale
Alkalinity, totalATµmol/kgGonzalez Bernat, Maria JoseClosed cell titration
Partial pressure of carbon dioxide (water) at sea surface temperature (wet air)pCO2water_SST_wetµatmGonzalez Bernat, Maria JoseCalculated using SWCO2 (Hunter, 2007)
10 Aragonite saturation stateOmega ArgGonzalez Bernat, Maria JoseCalculated using SWCO2 (Hunter, 2007)
11 Calcite saturation stateOmega CalGonzalez Bernat, Maria JoseCalculated using SWCO2 (Hunter, 2007)
12 Proportion of survivalSurvivalGonzalez Bernat, Maria Jose
13 Proportion of survival, standard errorSurvival std err±Gonzalez Bernat, Maria Jose
14 Carbonate system computation flagCSC flagNisumaa, Anne-MarinCalculated using seacarb after Nisumaa et al. (2010)
15 pHpHNisumaa, Anne-MarinCalculated using seacarb after Nisumaa et al. (2010)Total scale
16 Carbon dioxideCO2µmol/kgNisumaa, Anne-MarinCalculated using seacarb after Nisumaa et al. (2010)
17 Partial pressure of carbon dioxide (water) at sea surface temperature (wet air)pCO2water_SST_wetµatmNisumaa, Anne-MarinCalculated using seacarb after Nisumaa et al. (2010)
18 Fugacity of carbon dioxide (water) at sea surface temperature (wet air)fCO2water_SST_wetµatmNisumaa, Anne-MarinCalculated using seacarb after Nisumaa et al. (2010)
19 Bicarbonate ion[HCO3]-µmol/kgNisumaa, Anne-MarinCalculated using seacarb after Nisumaa et al. (2010)
20 Carbonate ion[CO3]2-µmol/kgNisumaa, Anne-MarinCalculated using seacarb after Nisumaa et al. (2010)
21 Carbon, inorganic, dissolvedDICµmol/kgNisumaa, Anne-MarinCalculated using seacarb after Nisumaa et al. (2010)
22 Aragonite saturation stateOmega ArgNisumaa, Anne-MarinCalculated using seacarb after Nisumaa et al. (2010)
23 Calcite saturation stateOmega CalNisumaa, Anne-MarinCalculated using seacarb after Nisumaa et al. (2010)
Size:
2360 data points

Data

Download dataset as tab-delimited text — use the following character encoding:


Species

Exp day [day]

Sal

Sal std dev [±]

Temp [°C]

T std dev [±]

pH
(NBS scale, pH meter CG 837)

AT [µmol/kg]
(Closed cell titration)

pCO2water_SST_wet [µatm]
(Calculated using SWCO2 (Hunte...)
10 
Omega Arg
(Calculated using SWCO2 (Hunte...)
11 
Omega Cal
(Calculated using SWCO2 (Hunte...)
12 
Survival
13 
Survival std err [±]
14 
CSC flag
(Calculated using seacarb afte...)
15 
pH
(Total scale, Calculated using...)
16 
CO2 [µmol/kg]
(Calculated using seacarb afte...)
17 
pCO2water_SST_wet [µatm]
(Calculated using seacarb afte...)
18 
fCO2water_SST_wet [µatm]
(Calculated using seacarb afte...)
19 
[HCO3]- [µmol/kg]
(Calculated using seacarb afte...)
20 
[CO3]2- [µmol/kg]
(Calculated using seacarb afte...)
21 
DIC [µmol/kg]
(Calculated using seacarb afte...)
22 
Omega Arg
(Calculated using seacarb afte...)
23 
Omega Cal
(Calculated using seacarb afte...)
Odontaster validus1350.5-0.50.58.102274.2326.62.601.641.030.75268.0226.30412.07410.272057.1085.302168.701.282.04
Odontaster validus3350.5-0.50.58.102274.2326.62.601.641.000.00268.0226.30412.07410.272057.1085.302168.701.282.04
Odontaster validus6350.5-0.50.58.102274.2326.62.601.641.050.29268.0226.30412.07410.272057.1085.302168.701.282.04
Odontaster validus9350.5-0.50.58.102274.2326.62.601.641.000.41268.0226.30412.07410.272057.1085.302168.701.282.04
Odontaster validus14350.5-0.50.58.102274.2326.62.601.641.030.25268.0226.30412.07410.272057.1085.302168.701.282.04
Odontaster validus21350.5-0.50.58.102274.2326.62.601.640.980.25268.0226.30412.07410.272057.1085.302168.701.282.04
Odontaster validus23350.5-0.50.58.102274.2326.62.601.640.950.29268.0226.30412.07410.272057.1085.302168.701.282.04
Odontaster validus30350.5-0.50.58.102274.2326.62.601.640.930.25268.0226.30412.07410.272057.1085.302168.701.282.04
Odontaster validus36350.5-0.50.58.102274.2326.62.601.640.850.50268.0226.30412.07410.272057.1085.302168.701.282.04
Odontaster validus48350.5-0.50.58.102274.2326.62.601.640.850.65268.0226.30412.07410.272057.1085.302168.701.282.04
Odontaster validus58350.5-0.50.58.102274.2326.62.601.640.850.64268.0226.30412.07410.272057.1085.302168.701.282.04
Odontaster validus1350.5-0.50.57.802266.6691.21.380.870.980.49267.7254.80858.54854.792152.2844.822251.900.671.07
Odontaster validus3350.5-0.50.57.802266.6691.21.380.871.030.25267.7254.80858.54854.792152.2844.822251.900.671.07
Odontaster validus6350.5-0.50.57.802266.6691.21.380.870.980.25267.7254.80858.54854.792152.2844.822251.900.671.07
Odontaster validus9350.5-0.50.57.802266.6691.21.380.871.000.00267.7254.80858.54854.792152.2844.822251.900.671.07
Odontaster validus14350.5-0.50.57.802266.6691.21.380.870.930.48267.7254.80858.54854.792152.2844.822251.900.671.07
Odontaster validus21350.5-0.50.57.802266.6691.21.380.870.830.48267.7254.80858.54854.792152.2844.822251.900.671.07
Odontaster validus23350.5-0.50.57.802266.6691.21.380.870.830.63267.7254.80858.54854.792152.2844.822251.900.671.07
Odontaster validus30350.5-0.50.57.802266.6691.21.380.870.800.71267.7254.80858.54854.792152.2844.822251.900.671.07
Odontaster validus36350.5-0.50.57.802266.6691.21.380.870.730.48267.7254.80858.54854.792152.2844.822251.900.671.07
Odontaster validus48350.5-0.50.57.802266.6691.21.380.870.730.25267.7254.80858.54854.792152.2844.822251.900.671.07
Odontaster validus58350.5-0.50.57.802266.6691.21.380.870.751.19267.7254.80858.54854.792152.2844.822251.900.671.07
Odontaster validus1350.5-0.50.57.602281.31129.60.890.571.050.29267.5288.891392.551386.472207.2529.062325.200.440.70
Odontaster validus3350.5-0.50.57.602281.31129.60.890.571.080.25267.5288.891392.551386.472207.2529.062325.200.440.70
Odontaster validus6350.5-0.50.57.602281.31129.60.890.570.980.25267.5288.891392.551386.472207.2529.062325.200.440.70
Odontaster validus9350.5-0.50.57.602281.31129.60.890.570.830.25267.5288.891392.551386.472207.2529.062325.200.440.70
Odontaster validus14350.5-0.50.57.602281.31129.60.890.570.850.28267.5288.891392.551386.472207.2529.062325.200.440.70
Odontaster validus21350.5-0.50.57.602281.31129.60.890.570.750.29267.5288.891392.551386.472207.2529.062325.200.440.70
Odontaster validus23350.5-0.50.57.602281.31129.60.890.570.630.25267.5288.891392.551386.472207.2529.062325.200.440.70
Odontaster validus30350.5-0.50.57.602281.31129.60.890.570.550.29267.5288.891392.551386.472207.2529.062325.200.440.70
Odontaster validus36350.5-0.50.57.602281.31129.60.890.570.530.25267.5288.891392.551386.472207.2529.062325.200.440.70
Odontaster validus48350.5-0.50.57.602281.31129.60.890.570.580.49267.5288.891392.551386.472207.2529.062325.200.440.70
Odontaster validus58350.5-0.50.57.602281.31129.60.890.570.450.29267.5288.891392.551386.472207.2529.062325.200.440.70
Odontaster validus1350.5-0.50.57.002262.34604.10.230.151.030.25266.92358.755620.085595.542243.417.442609.600.110.18
Odontaster validus3350.5-0.50.57.002262.34604.10.230.150.980.63266.92358.755620.085595.542243.417.442609.600.110.18
Odontaster validus6350.5-0.50.57.002262.34604.10.230.150.950.50266.92358.755620.085595.542243.417.442609.600.110.18
Odontaster validus9350.5-0.50.57.002262.34604.10.230.150.750.65266.92358.755620.085595.542243.417.442609.600.110.18
Odontaster validus14350.5-0.50.57.002262.34604.10.230.150.650.50266.92358.755620.085595.542243.417.442609.600.110.18
Odontaster validus21350.5-0.50.57.002262.34604.10.230.150.600.86266.92358.755620.085595.542243.417.442609.600.110.18
Odontaster validus23350.5-0.50.57.002262.34604.10.230.150.580.25266.92358.755620.085595.542243.417.442609.600.110.18
Odontaster validus30350.5-0.50.57.002262.34604.10.230.150.400.00266.92358.755620.085595.542243.417.442609.600.110.18
Odontaster validus36350.5-0.50.57.002262.34604.10.230.150.350.29266.92358.755620.085595.542243.417.442609.600.110.18
Odontaster validus48350.5-0.50.57.002262.34604.10.230.150.250.65266.92358.755620.085595.542243.417.442609.600.110.18
Odontaster validus58350.5-0.50.57.002262.34604.10.230.150.080.48266.92358.755620.085595.542243.417.442609.600.110.18
Patiriella regularis1350.515.00.58.102304.1337.44.262.740.980.25267.9917.57470.64468.961954.95140.782113.302.153.35
Patiriella regularis3350.515.00.58.102304.1337.44.262.740.980.25267.9917.57470.64468.961954.95140.782113.302.153.35
Patiriella regularis4350.515.00.58.102304.1337.44.262.740.900.41267.9917.57470.64468.961954.95140.782113.302.153.35
Patiriella regularis6350.515.00.58.102304.1337.44.262.740.880.25267.9917.57470.64468.961954.95140.782113.302.153.35
Patiriella regularis8350.515.00.58.102304.1337.44.262.740.850.29267.9917.57470.64468.961954.95140.782113.302.153.35
Patiriella regularis10350.515.00.58.102304.1337.44.262.740.830.25267.9917.57470.64468.961954.95140.782113.302.153.35
Patiriella regularis13350.515.00.58.102304.1337.44.262.740.800.41267.9917.57470.64468.961954.95140.782113.302.153.35
Patiriella regularis14350.515.00.58.102304.1337.44.262.740.700.41267.9917.57470.64468.961954.95140.782113.302.153.35
Patiriella regularis16350.515.00.58.102304.1337.44.262.740.730.48267.9917.57470.64468.961954.95140.782113.302.153.35
Patiriella regularis20350.515.00.58.102304.1337.44.262.740.700.41267.9917.57470.64468.961954.95140.782113.302.153.35
Patiriella regularis24350.515.00.58.102304.1337.44.262.740.680.25267.9917.57470.64468.961954.95140.782113.302.153.35
Patiriella regularis1350.515.00.57.802304.7744.92.361.520.900.00267.6937.941016.541012.912115.4476.322229.701.171.82
Patiriella regularis3350.515.00.57.802304.7744.92.361.520.850.29267.6937.941016.541012.912115.4476.322229.701.171.82
Patiriella regularis4350.515.00.57.802304.7744.92.361.520.880.25267.6937.941016.541012.912115.4476.322229.701.171.82
Patiriella regularis6350.515.00.57.802304.7744.92.361.520.830.48267.6937.941016.541012.912115.4476.322229.701.171.82
Patiriella regularis8350.515.00.57.802304.7744.92.361.520.730.48267.6937.941016.541012.912115.4476.322229.701.171.82
Patiriella regularis10350.515.00.57.802304.7744.92.361.520.700.00267.6937.941016.541012.912115.4476.322229.701.171.82
Patiriella regularis13350.515.00.57.802304.7744.92.361.520.650.65267.6937.941016.541012.912115.4476.322229.701.171.82
Patiriella regularis14350.515.00.57.802304.7744.92.361.520.680.48267.6937.941016.541012.912115.4476.322229.701.171.82
Patiriella regularis16350.515.00.57.802304.7744.92.361.520.680.25267.6937.941016.541012.912115.4476.322229.701.171.82
Patiriella regularis20350.515.00.57.802304.7744.92.361.520.680.25267.6937.941016.541012.912115.4476.322229.701.171.82
Patiriella regularis24350.515.00.57.802304.7744.92.361.520.650.29267.6937.941016.541012.912115.4476.322229.701.171.82
Patiriella regularis1350.515.00.57.602305.91229.51.550.991.000.41267.4962.071663.031657.102182.7649.672294.500.761.18
Patiriella regularis3350.515.00.57.602305.91229.51.550.990.601.08267.4962.071663.031657.102182.7649.672294.500.761.18
Patiriella regularis4350.515.00.57.602305.91229.51.550.990.550.29267.4962.071663.031657.102182.7649.672294.500.761.18
Patiriella regularis6350.515.00.57.602305.91229.51.550.990.480.25267.4962.071663.031657.102182.7649.672294.500.761.18
Patiriella regularis8350.515.00.57.602305.91229.51.550.990.400.41267.4962.071663.031657.102182.7649.672294.500.761.18
Patiriella regularis10350.515.00.57.602305.91229.51.550.990.450.29267.4962.071663.031657.102182.7649.672294.500.761.18
Patiriella regularis13350.515.00.57.602305.91229.51.550.990.430.25267.4962.071663.031657.102182.7649.672294.500.761.18
Patiriella regularis14350.515.00.57.602305.91229.51.550.990.400.41267.4962.071663.031657.102182.7649.672294.500.761.18
Patiriella regularis16350.515.00.57.602305.91229.51.550.990.350.29267.4962.071663.031657.102182.7649.672294.500.761.18
Patiriella regularis20350.515.00.57.602305.91229.51.550.990.380.25267.4962.071663.031657.102182.7649.672294.500.761.18
Patiriella regularis24350.515.00.57.602305.91229.51.550.990.380.25267.4962.071663.031657.102182.7649.672294.500.761.18
Patiriella regularis1350.515.00.57.002309.35173.10.410.261.030.25266.89257.926909.866885.242277.1713.012548.100.200.31
Patiriella regularis3350.515.00.57.002309.35173.10.410.260.600.41266.89257.926909.866885.242277.1713.012548.100.200.31
Patiriella regularis4350.515.00.57.002309.35173.10.410.260.450.50266.89257.926909.866885.242277.1713.012548.100.200.31
Patiriella regularis6350.515.00.57.002309.35173.10.410.260.450.65266.89257.926909.866885.242277.1713.012548.100.200.31
Patiriella regularis8350.515.00.57.002309.35173.10.410.260.130.48266.89257.926909.866885.242277.1713.012548.100.200.31
Patiriella regularis10350.515.00.57.002309.35173.10.410.260.130.25266.89257.926909.866885.242277.1713.012548.100.200.31
Patiriella regularis13350.515.00.57.002309.35173.10.410.260.150.29266.89257.926909.866885.242277.1713.012548.100.200.31
Patiriella regularis14350.515.00.57.002309.35173.10.410.260.180.48266.89257.926909.866885.242277.1713.012548.100.200.31
Patiriella regularis16350.515.00.57.002309.35173.10.410.260.150.29266.89257.926909.866885.242277.1713.012548.100.200.31
Patiriella regularis20350.515.00.57.002309.35173.10.410.260.130.25266.89257.926909.866885.242277.1713.012548.100.200.31
Patiriella regularis24350.515.00.57.002309.35173.10.410.260.030.25266.89257.926909.866885.242277.1713.012548.100.200.31
Arachnoides placenta13426.08.102651.0390.24.933.160.980.57267.9616.25586.45584.622136.95215.302368.503.455.22
Arachnoides placenta23426.08.102651.0390.24.933.160.960.30267.9616.25586.45584.622136.95215.302368.503.455.22
Arachnoides placenta33426.08.102651.0390.24.933.160.690.72267.9616.25586.45584.622136.95215.302368.503.455.22
Arachnoides placenta43426.08.102651.0390.24.933.160.670.11267.9616.25586.45584.622136.95215.302368.503.455.22
Arachnoides placenta13426.07.802651.0859.12.721.750.930.34267.6635.891295.311291.282366.11119.512521.501.912.90
Arachnoides placenta23426.07.802651.0859.12.721.751.020.68267.6635.891295.311291.282366.11119.512521.501.912.90
Arachnoides placenta33426.07.802651.0859.12.721.750.680.63267.6635.891295.311291.282366.11119.512521.501.912.90
Arachnoides placenta43426.07.802651.0859.12.721.750.721.14267.6635.891295.311291.282366.11119.512521.501.912.90
Arachnoides placenta13426.07.602651.01416.01.791.151.010.48267.4659.232138.022131.372463.9578.512601.701.261.90
Arachnoides placenta23426.07.602651.01416.01.791.150.910.12267.4659.232138.022131.372463.9578.512601.701.261.90
Arachnoides placenta33426.07.602651.01416.01.791.150.581.01267.4659.232138.022131.372463.9578.512601.701.261.90
Arachnoides placenta43426.07.602651.01416.01.791.150.440.86267.4659.242138.442131.792463.9978.502601.731.261.90
Arachnoides placenta13426.07.002651.05941.20.470.300.950.16266.86249.038988.928960.962601.5720.822871.420.330.50
Arachnoides placenta23426.07.002651.05941.20.470.300.760.53266.86249.038988.928960.962601.5720.822871.420.330.50
Arachnoides placenta33426.07.002651.05941.20.470.300.390.56266.86249.038988.928960.962601.5720.822871.420.330.50
Arachnoides placenta43426.07.002651.05941.20.470.300.160.12266.86249.038988.928960.962601.5720.822871.420.330.50