Citation:

bg-9-1885-2012

Name: Seawater carbonate chemistry, nutrients, chlorophyll, and growth rate of Phaeocystis globosa (strain Pg G''A'') during experiments, 2011
Published: 2012-03-29
License: https://creativecommons.org/licenses/by/3.0/
Keywords: Biomass/Abundance/Elemental composition; Bottles or small containers/Aquaria (<20 L); Chromista; Growth/Morphology; Haptophyta; Laboratory experiment; Laboratory strains; Light; Pelagos; Phaeocystis globosa; Phytoplankton; Primary production/Photosynthesis; Single species

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Keyword(s):

Biomass/Abundance/Elemental composition; Bottles or small containers/Aquaria (<20 L); Chromista; Growth/Morphology; Haptophyta; Laboratory experiment; Laboratory strains; Light; Pelagos; Phaeocystis globosa; Phytoplankton; Primary production/Photosynthesis; Single species

Project(s):

European network of excellence for Ocean Ecosystems Analysis (EUR-OCEANS)

European Project on Ocean Acidification (EPOCA)

Funding:

Seventh Framework Programme (FP7), grant/award no. 211384 : European Project on Ocean Acidification

Sixth Framework Programme (FP6), grant/award no. 511106 : European network of excellence for Ocean Ecosystems Analysis

Comment:

In order to allow full comparability with other ocean acidification data sets, the R package seacarb (Lavigne and Gattuso, 2011) was used to compute a complete and consistent set of carbonate system variables, as described by Nisumaa et al. (2010). In this dataset the original values were archived in addition with the recalculated parameters (see related PI).

Parameter(s):

#	Name	Short Name	Unit	Principal Investigator	Method/Device	Comment
1	Experimental treatment	Exp treat		Hoogstraten, Astrid		Light
2	Experimental treatment	Exp treat		Hoogstraten, Astrid		CO2
3	Salinity	Sal		Hoogstraten, Astrid
4	Temperature, water	Temp	°C	Hoogstraten, Astrid
5	Temperature, standard deviation	T std dev	±	Hoogstraten, Astrid
6	Nitrate	[NO3]-	µmol/l	Hoogstraten, Astrid
7	Phosphate	[PO4]3-	µmol/l	Hoogstraten, Astrid
8	Silicate	SILCAT	µmol/kg	Hoogstraten, Astrid
9	Radiation, photosynthetically active	PAR	µmol/m²/s	Hoogstraten, Astrid
10	Light:Dark cycle	L:D	hh:hh	Hoogstraten, Astrid
11	Alkalinity, total	AT	µmol/kg	Hoogstraten, Astrid	Potentiometric titration, VINDTA (marianda)
12	Alkalinity, total, standard deviation	AT std dev	±	Hoogstraten, Astrid
13	Carbon, inorganic, dissolved	DIC	µmol/kg	Hoogstraten, Astrid	Potentiometric titration, VINDTA (marianda)
14	Carbon, inorganic, dissolved, standard deviation	DIC std dev	±	Hoogstraten, Astrid
15	Partial pressure of carbon dioxide (water) at sea surface temperature (wet air)	pCO2water_SST_wet	µatm	Hoogstraten, Astrid	Calculated using CO2SYS
16	Carbon dioxide, partial pressure, standard deviation	pCO2 std dev	±	Hoogstraten, Astrid
17	Carbon dioxide	CO2	µmol/kg	Hoogstraten, Astrid	Calculated using CO2SYS
18	Carbon dioxide, standard deviation	CO2 std dev	±	Hoogstraten, Astrid
19	Photosynthetic efficiency	FV/FM		Hoogstraten, Astrid	see reference(s)
20	Photosynthetic efficiency, standard deviation	alpha std dev	±	Hoogstraten, Astrid
21	Chlorophyll a per cell	Chl a/cell	pg/#	Hoogstraten, Astrid	Spectrofluorometry
22	Chlorophyll a, standard deviation	Chl a std dev	±	Hoogstraten, Astrid
23	Chlorophyll a/particulate organic carbon ratio	Chl a/POC		Hoogstraten, Astrid
24	Chlorophyll a/particulate organic carbon ratio, standard deviation	Chl a/POC std dev	±	Hoogstraten, Astrid
25	Nitrate uptake rate per cell	NO3 upt rate/cell	fmol/#/day	Hoogstraten, Astrid	Auto-analyzer, Technicon Traacs 800
26	Nitrate uptake rate, standard deviation	NO3 upt rate std dev	±	Hoogstraten, Astrid
27	Phosphate uptake rate per cell	PO4 upt rate/cell	fmol/#/day	Hoogstraten, Astrid	Auto-analyzer, Technicon Traacs 800
28	Phosphate uptake rate, standard deviation	PO4 upt rate std dev	±	Hoogstraten, Astrid
29	Nitrogen/Phosphorus ratio	N/P		Hoogstraten, Astrid
30	Nitrogen/Phosphorus ratio, standard deviation	N/P std dev	±	Hoogstraten, Astrid
31	Growth rate	µ	#/day	Hoogstraten, Astrid	Coulter Counter (Beckman Coulter)
32	Growth rate, standard deviation	µ std dev	±	Hoogstraten, Astrid
33	Particulate organic carbon, per cell	POC/cell	pmol/#	Hoogstraten, Astrid
34	Particulate organic carbon content per cell, standard deviation	POC cont/cell std dev	±	Hoogstraten, Astrid
35	Particulate organic nitrogen per cell	PON/cell	pmol/#	Hoogstraten, Astrid
36	Particulate organic nitrogen per cell, standard deviation	PON/cell std dev	±	Hoogstraten, Astrid
37	Carbon, organic, particulate/Nitrogen, organic, particulate ratio	POC/PON		Hoogstraten, Astrid
38	Carbon, organic, particulate/Nitrogen, organic, particulate ratio, standard deviation	POC/PON std dev	±	Hoogstraten, Astrid
39	Carbonate system computation flag	CSC flag		Nisumaa, Anne-Marin	Calculated using seacarb after Nisumaa et al. (2010)
40	pH	pH		Nisumaa, Anne-Marin	Calculated using seacarb after Nisumaa et al. (2010)	Total scale
41	Carbon dioxide	CO2	µmol/kg	Nisumaa, Anne-Marin	Calculated using seacarb after Nisumaa et al. (2010)
42	Partial pressure of carbon dioxide (water) at sea surface temperature (wet air)	pCO2water_SST_wet	µatm	Nisumaa, Anne-Marin	Calculated using seacarb after Nisumaa et al. (2010)
43	Fugacity of carbon dioxide (water) at sea surface temperature (wet air)	fCO2water_SST_wet	µatm	Nisumaa, Anne-Marin	Calculated using seacarb after Nisumaa et al. (2010)
44	Bicarbonate ion	[HCO3]-	µmol/kg	Nisumaa, Anne-Marin	Calculated using seacarb after Nisumaa et al. (2010)
45	Carbonate ion	[CO3]2-	µmol/kg	Nisumaa, Anne-Marin	Calculated using seacarb after Nisumaa et al. (2010)
46	Aragonite saturation state	Omega Arg		Nisumaa, Anne-Marin	Calculated using seacarb after Nisumaa et al. (2010)
47	Calcite saturation state	Omega Cal		Nisumaa, Anne-Marin	Calculated using seacarb after Nisumaa et al. (2010)

License:

Creative Commons Attribution 3.0 Unported (CC-BY-3.0)

Size:

282 data points

Data

Download dataset as tab-delimited text — use the following character encoding:

1 Exp treat (Light)	2 Exp treat (CO2)	3 Sal	4 Temp [°C]	5 T std dev [±]	6 [NO3]- [µmol/l]	7 [PO4]3- [µmol/l]	8 SILCAT [µmol/kg]	9 PAR [µmol/m²/s]	10 L:D [hh:hh]	11 AT [µmol/kg] (Potentiometric titration, VIN...)	12 AT std dev [±]	13 DIC [µmol/kg] (Potentiometric titration, VIN...)	14 DIC std dev [±]	15 pCO2water_SST_wet [µatm] (Calculated using CO2SYS)	16 pCO2 std dev [±]	17 CO2 [µmol/kg] (Calculated using CO2SYS)	18 CO2 std dev [±]	19 FV/FM (see reference(s))	20 alpha std dev [±]	21 Chl a/cell [pg/#] (Spectrofluorometry)	22 Chl a std dev [±]	23 Chl a/POC	24 Chl a/POC std dev [±]	25 NO3 upt rate/cell [fmol/#/day] (Auto-analyzer, Technicon Traa...)	26 NO3 upt rate std dev [±]	27 PO4 upt rate/cell [fmol/#/day] (Auto-analyzer, Technicon Traa...)	28 PO4 upt rate std dev [±]	29 N/P	30 N/P std dev [±]	31 µ [#/day] (Coulter Counter (Beckman Coul...)	32 µ std dev [±]	33 POC/cell [pmol/#]	34 POC cont/cell std dev [±]	35 PON/cell [pmol/#]	37 POC/PON	38 POC/PON std dev [±]	39 CSC flag (Calculated using seacarb afte...)	40 pH (Total scale, Calculated using...)	41 CO2 [µmol/kg] (Calculated using seacarb afte...)	42 pCO2water_SST_wet [µatm] (Calculated using seacarb afte...)	43 fCO2water_SST_wet [µatm] (Calculated using seacarb afte...)	44 [HCO3]- [µmol/kg] (Calculated using seacarb afte...)	45 [CO3]2- [µmol/kg] (Calculated using seacarb afte...)	46 Omega Arg (Calculated using seacarb afte...)	47 Omega Cal (Calculated using seacarb afte...)
High Light	Low CO2	35.5	15	0.1	60	3.75	60	240	16:08	2476.3	3.9	1921.7	15.7	109.6	6.8	4.1	0.3	0.56	0.03	0.16	0.01	69.1	4.4	118.4	22.6	6.9	1.5	17.4	2.9	1.4	0.1	0.9	0.06	0.1	7.7	0.8	15	8.52	3.98	106.88	106.50	1532.74	384.98	5.87	9.14
High Light	Intermediate CO2	35.5	15	0.1	60	3.75	60	240	16:08	2476.2	3.9	2130.9	15.7	259.0	6.8	9.7	0.3	0.65	0.02	0.15	0.01	82.4	11.4	133.5	29.8	9.2	3.5	15.7	4.6	1.2	0.2	1.0	0.11	0.1	8.2	0.7	15	8.24	9.39	252.23	251.33	1876.89	244.62	3.73	5.81
High Light	High CO2	35.5	15	0.1	60	3.75	60	240	16:08	2477.1	5.8	2284.1	19.1	549.4	52.1	20.5	1.9	0.66	0.02	0.16	0.02	76.2	24.8	128.4	18.5	8.8	2.0	15.1	3.2	1.1	0.1	1.0	0.41	0.1	8.9	1.6	15	7.97	19.90	534.74	532.84	2117.35	146.84	2.24	3.49
Low Light	Low CO2	35.5	15	0.1	60	3.75	60	80	16:08	2475.8	3.9	1939.9	19.4	117.9	8.2	4.2	0.3	0.71	0.02	0.22	0.02	53.6	8.8	96.2	17.1	5.7	1.0	17.1	3.5	1.0	0.1	1.0	0.13	0.1	8.2	0.7	15	8.50	4.28	114.97	114.56	1563.30	372.32	5.68	8.84
Low Light	Intermediate CO2	35.5	15	0.1	60	3.75	60	80	16:08	2474.4	2.6	2003.4	18.5	152.4	10.7	5.7	0.4	0.70	0.03	0.23	0.03	54.0	7.5	115.1	18.6	7.9	7.5	21.6	10.6	1.1	0.1	1.0	0.06	0.1	8.0	0.7	15	8.42	5.53	148.59	148.06	1669.38	328.49	5.01	7.80
Low Light	High CO2	35.5	15	0.1	60	3.75	60	80	16:08	2479.0	3.0	2313.2	9.9	641.8	37.2	24.0	1.4	0.70	0.02	0.24	0.03	56.1	8.4	142.3	22.7	9.0	3.2	17.0	5.1	1.2	0.1	1.1	0.11	0.1	8.4	1.0	15	7.91	23.30	626.08	623.85	2159.44	130.45	1.99	3.10