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Frommel, Andrea Y; Maneja, Rommel H; Lowe, David J; Malzahn, Arne Michael; Geffen, Audrey J; Folkvord, Arild; Piatkowski, Uwe; Reusch, Thorsten B H; Clemmesen, Catriona (2012): Seawater carbonate chemistry and Atlantic cod, Gadus morhua tissue damage during experiments, 2012. PANGAEA, https://doi.org/10.1594/PANGAEA.778465, In supplement to: Frommel, AY et al. (2012): Severe tissue damage in Atlantic cod larvae under increasing ocean acidification. Nature Climate Change, 2, 42-46, https://doi.org/10.1038/nclimate1324

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Keyword(s):
Animalia; Chordata; Coast and continental shelf; Development; Gadus morhua; Laboratory experiment; Mesocosm or benthocosm; Nekton; Pelagos; Polar; Single species
Funding:
Federal Ministry of Education and Research (BMBF), grant/award no. 03F0655A: Biological Impacts of Ocean Acidification / BIOACID II
Federal Ministry of Education and Research (BMBF), grant/award no. FKZ 03F0728K: Biological Impacts of Ocean Acidification
Seventh Framework Programme (FP7), grant/award no. 211384: European Project on Ocean Acidification
Sixth Framework Programme (FP6), grant/award no. 511106: European network of excellence for Ocean Ecosystems Analysis
Coverage:
Date/Time Start: 2010-05-11T00:00:00 * Date/Time End: 2010-05-25T00:00:00
Comment:
In order to allow full comparability with other ocean acidification data sets, the R package seacarb (Lavigne and Gattuso, 2011) was used to compute a complete and consistent set of carbonate system variables, as described by Nisumaa et al. (2010). In this dataset the original values were archived in addition with the recalculated parameters (see related PI).
Parameter(s):
#NameShort NameUnitPrincipal InvestigatorMethod/DeviceComment
1Sample IDSample IDFrommel, Andrea Y
2SpeciesSpeciesFrommel, Andrea Y
3Experimental treatmentExp treatFrommel, Andrea Y
4DATE/TIMEDate/TimeGeocode
5Gadus morhua, condition, eyeG. morhua eye#Frommel, Andrea Y
6Gadus morhua, condition, liverG. morhua liver#Frommel, Andrea Y
7Gadus morhua, condition, pancreasG. morhua pancreas#Frommel, Andrea Y
8Gadus morhua, condition, kidneyG. morhua kidney#Frommel, Andrea Y
9Gadus morhua, condition, gutG. morhua gut#Frommel, Andrea Y
10Gadus morhua, condition, gut, bacteriaG. morhua gut bacteria#Frommel, Andrea Y
11Gadus morhua, condition, notochordG. morhua notochord#Frommel, Andrea Y
12SalinitySalFrommel, Andrea Y
13Salinity, standard deviationSal std dev±Frommel, Andrea Y
14Temperature, waterTemp°CFrommel, Andrea Y
15Temperature, standard deviationT std dev±Frommel, Andrea Y
16Alkalinity, totalATµmol/kgFrommel, Andrea Y
17Alkalinity, total, standard deviationAT std dev±Frommel, Andrea Y
18Carbon, inorganic, dissolvedDICµmol/kgFrommel, Andrea Y
19Carbon, inorganic, dissolved, standard deviationDIC std dev±Frommel, Andrea Y
20pHpHFrommel, Andrea YTotal scale
21pH, standard deviationpH std dev±Frommel, Andrea Y
22Partial pressure of carbon dioxide (water) at sea surface temperature (wet air)pCO2water_SST_wetµatmFrommel, Andrea Y
23Carbon dioxide, partial pressure, standard deviationpCO2 std dev±Frommel, Andrea Y
24Carbonate system computation flagCSC flagNisumaa, Anne-MarinCalculated using seacarb after Nisumaa et al. (2010)
25pHpHNisumaa, Anne-MarinCalculated using seacarb after Nisumaa et al. (2010)Total scale
26Carbon dioxideCO2µmol/kgNisumaa, Anne-MarinCalculated using seacarb after Nisumaa et al. (2010)
27Partial pressure of carbon dioxide (water) at sea surface temperature (wet air)pCO2water_SST_wetµatmNisumaa, Anne-MarinCalculated using seacarb after Nisumaa et al. (2010)
28Fugacity of carbon dioxide (water) at sea surface temperature (wet air)fCO2water_SST_wetµatmNisumaa, Anne-MarinCalculated using seacarb after Nisumaa et al. (2010)
29Bicarbonate ion[HCO3]-µmol/kgNisumaa, Anne-MarinCalculated using seacarb after Nisumaa et al. (2010)
30Carbonate ion[CO3]2-µmol/kgNisumaa, Anne-MarinCalculated using seacarb after Nisumaa et al. (2010)
31Aragonite saturation stateOmega ArgNisumaa, Anne-MarinCalculated using seacarb after Nisumaa et al. (2010)
32Calcite saturation stateOmega CalNisumaa, Anne-MarinCalculated using seacarb after Nisumaa et al. (2010)
Size:
4089 data points

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