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Frommel, Andrea Y; Schubert, Alexander; Piatkowski, Uwe; Clemmesen, Catriona (2013): Seawater carbonate chemistry and DNA, RNA, proteins and mass of Gadus morhua during experiments (Experiment 4), 2012 [dataset]. PANGAEA, https://doi.org/10.1594/PANGAEA.778453, In supplement to: Frommel, AY et al. (2013): Egg and early larval stages of Baltic cod, Gadus morhua, are robust to high levels of ocean acidification. Marine Biology, 160(8), 1825-1834, https://doi.org/10.1007/s00227-011-1876-3

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Keyword(s):
Animalia; Biomass/Abundance/Elemental composition; Bottles or small containers/Aquaria (<20 L); Chordata; Coast and continental shelf; Gadus morhua; Laboratory experiment; Nekton; Pelagos; Single species; Temperate
Funding:
Seventh Framework Programme (FP7), grant/award no. 211384: European Project on Ocean Acidification
Sixth Framework Programme (FP6), grant/award no. 511106: European network of excellence for Ocean Ecosystems Analysis
Comment:
In order to allow full comparability with other ocean acidification data sets, the R package seacarb (Lavigne and Gattuso, 2011) was used to compute a complete and consistent set of carbonate system variables, as described by Nisumaa et al. (2010). In this dataset the original values were archived in addition with the recalculated parameters (see related PI).
Parameter(s):
#NameShort NameUnitPrincipal InvestigatorMethod/DeviceComment
IdentificationIDFrommel, Andrea Y
ORDINAL NUMBEROrd NoGeocode
Experiment dayExp daydayFrommel, Andrea Y
Partial pressure of carbon dioxide (water) at sea surface temperature (wet air)pCO2water_SST_wetµatmFrommel, Andrea Y
pHpHFrommel, Andrea YWTW 340i pH-analyzer and WTW SenTix 81-electrodeNBS scale
SalinitySalFrommel, Andrea Y
Salinity, standard deviationSal std dev±Frommel, Andrea Y
Temperature, waterTemp°CFrommel, Andrea Y
Sample massSamp mmgFrommel, Andrea Y
10 Deoxyribonucleic acidDNAµgFrommel, Andrea Ysee reference(s)
11 Ribonucleic acidRNAµgFrommel, Andrea Ysee reference(s)
12 Absolute protein contentProteinmgFrommel, Andrea Y
13 Carbonate system computation flagCSC flagNisumaa, Anne-MarinCalculated using seacarb after Nisumaa et al. (2010)
14 pHpHNisumaa, Anne-MarinCalculated using seacarb after Nisumaa et al. (2010)Total scale
15 Carbon dioxideCO2µmol/kgNisumaa, Anne-MarinCalculated using seacarb after Nisumaa et al. (2010)
16 Partial pressure of carbon dioxide (water) at sea surface temperature (wet air)pCO2water_SST_wetµatmNisumaa, Anne-MarinCalculated using seacarb after Nisumaa et al. (2010)
17 Fugacity of carbon dioxide (water) at sea surface temperature (wet air)fCO2water_SST_wetµatmNisumaa, Anne-MarinCalculated using seacarb after Nisumaa et al. (2010)
18 Bicarbonate ion[HCO3]-µmol/kgNisumaa, Anne-MarinCalculated using seacarb after Nisumaa et al. (2010)
19 Carbonate ion[CO3]2-µmol/kgNisumaa, Anne-MarinCalculated using seacarb after Nisumaa et al. (2010)
20 Carbon, inorganic, dissolvedDICµmol/kgNisumaa, Anne-MarinCalculated using seacarb after Nisumaa et al. (2010)
21 Alkalinity, totalATµmol/kgNisumaa, Anne-MarinCalculated using seacarb after Nisumaa et al. (2010)
22 Aragonite saturation stateOmega ArgNisumaa, Anne-MarinCalculated using seacarb after Nisumaa et al. (2010)
23 Calcite saturation stateOmega CalNisumaa, Anne-MarinCalculated using seacarb after Nisumaa et al. (2010)
Size:
2949 data points

Data

Download dataset as tab-delimited text — use the following character encoding:


ID

Ord No

Exp day [day]

pCO2water_SST_wet [µatm]

pH
(NBS scale, WTW 340i pH-analyz...)

Sal

Sal std dev [±]

Temp [°C]

Samp m [mg]
10 
DNA [µg]
(see reference(s))
11 
RNA [µg]
(see reference(s))
12 
Protein [mg]
13 
CSC flag
(Calculated using seacarb afte...)
14 
pH
(Total scale, Calculated using...)
15 
CO2 [µmol/kg]
(Calculated using seacarb afte...)
16 
pCO2water_SST_wet [µatm]
(Calculated using seacarb afte...)
17 
fCO2water_SST_wet [µatm]
(Calculated using seacarb afte...)
18 
[HCO3]- [µmol/kg]
(Calculated using seacarb afte...)
19 
[CO3]2- [µmol/kg]
(Calculated using seacarb afte...)
20 
DIC [µmol/kg]
(Calculated using seacarb afte...)
21 
AT [µmol/kg]
(Calculated using seacarb afte...)
22 
Omega Arg
(Calculated using seacarb afte...)
23 
Omega Cal
(Calculated using seacarb afte...)
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2009-06-202861014007.50170.17.70.03010.6297.3773.431400.241394.751315.0610.551399.041341.650.160.28
2009-06-202911014007.58170.17.70.02280.586750.74703297.4573.451400.551395.061581.0315.241669.721618.100.230.40
2009-06-202921014007.58170.17.70.02100.525390.62845297.4573.451400.551395.061581.0315.241669.721618.100.230.40
2009-06-202931014007.58170.17.70.03450.600930.73376297.4573.451400.551395.061581.0315.241669.721618.100.230.40
2009-06-202941014007.58170.17.70.02770.5297.4573.451400.551395.061581.0315.241669.721618.100.230.40
2009-06-202951014007.58170.17.70.02700.7297.4573.451400.551395.061581.0315.241669.721618.100.230.40
2009-06-202961014007.58170.17.70.06010.6297.4573.451400.551395.061581.0315.241669.721618.100.230.40
2009-06-20301103807.81170.17.70.02580.628680.78288297.6819.95380.31378.82728.7711.93760.64763.610.180.31
2009-06-20302103807.81170.17.70.01850.550390.72535297.6819.95380.31378.82728.7711.93760.64763.610.180.31
2009-06-20303103807.81170.17.70.02630.651160.78774297.6819.95380.31378.82728.7711.93760.64763.610.180.31
2009-06-20304103807.81170.17.70.02240.6297.6819.95380.31378.82728.7711.93760.64763.610.180.31
2009-06-20305103807.81170.17.70.02720.4297.6819.95380.31378.82728.7711.93760.64763.610.180.31
2009-06-20306103807.81170.17.70.02460.4297.6819.95380.31378.82728.7711.93760.64763.610.180.31
2009-06-203111014007.68170.17.70.03130.594750.71960297.5573.471400.831395.341990.3824.152088.002046.930.370.63
2009-06-203121014007.68170.17.70.02420.606980.79040297.5573.471400.831395.341990.3824.152088.002046.930.370.63
2009-06-203131014007.68170.17.70.03710.630360.82491297.5573.471400.831395.341990.3824.152088.002046.930.370.63
2009-06-203141014007.68170.17.70.02200.4297.5573.471400.831395.341990.3824.152088.002046.930.370.63
2009-06-203151014007.68170.17.70.02560.4297.5573.471400.831395.341990.3824.152088.002046.930.370.63
2009-06-203161014007.68170.17.70.02650.5297.5573.471400.831395.341990.3824.152088.002046.930.370.63
2009-06-20321103807.78170.17.70.02760.572430.88730297.6519.94380.22378.73680.1310.39710.46711.200.160.27
2009-06-20322103807.78170.17.70.03490.608740.78951297.6519.94380.22378.73680.1310.39710.46711.200.160.27
2009-06-20323103807.78170.17.70.02830.587010.80190297.6519.94380.22378.73680.1310.39710.46711.200.160.27
2009-06-20324103807.78170.17.70.02420.6297.6519.94380.22378.73680.1310.39710.46711.200.160.27
2009-06-20325103807.78170.17.70.02450.5297.6519.94380.22378.73680.1310.39710.46711.200.160.27
2009-06-20326103807.78170.17.70.02210.3297.6519.94380.22378.73680.1310.39710.46711.200.160.27