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Biermann, Antje; Engel, Anja (2010): Seawater carbonate chemistry and its effects on properties and sinking velocity of aggregates of the coccolithophore Emiliania huxleyi, 2010 [dataset]. PANGAEA, https://doi.org/10.1594/PANGAEA.778432, Supplement to: Biermann, A; Engel, A (2010): Effect of CO2 on the properties and sinking velocity of aggregates of the coccolithophore Emiliania huxleyi. Biogeosciences, 7(3), 1017-1029, https://doi.org/10.5194/bg-7-1017-2010

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Abstract:
Coccolithophores play an important role in organic matter export due to their production of the mineral calcite that can act as ballast. Recent studies indicated that calcification in coccolithophores may be affected by changes in seawater carbonate chemistry. We investigated the influence of CO2 on the aggregation and sinking behaviour of the coccolithophore Emiliania huxleyi (PML B92/11) during a laboratory experiment. The coccolithophores were grown under low (~180 µatm), medium (~380 µatm), and high (~750 µatm) CO2 conditions. Aggregation of the cells was promoted using roller tables. Size and settling velocity of aggregates were determined during the incubation using video image analysis. Our results indicate that aggregate properties are sensitive to changes in the degree of ballasting, as evoked by ocean acidification. Average sinking velocity was highest for low CO2 aggregates (~1292 m d-1) that also had the highest particulate inorganic to particulate organic carbon (PIC/POC) ratio. Lowest PIC/POC ratios and lowest sinking velocity (~366 m d-1) at comparable sizes were observed for aggregates of the high CO2 treatment. Aggregates of the high CO2 treatment showed a 4-fold lower excess density (~4.2*10**-4 g cm**-3) when compared to aggregates from the medium and low CO2 treatments (~1.7 g*10**-3 cm**-3). We also observed that more aggregates formed in the high CO2 treatment, and that those aggregates contained more bacteria than aggregates in the medium and low CO2 treatment. If applicable to the future ocean, our findings suggest that a CO2 induced reduction of the calcite content of aggregates could weaken the deep export of organic matter in the ocean, particularly in areas dominated by coccolithophores.
Keyword(s):
Biomass/Abundance/Elemental composition; Chromista; Containers and aquaria (20-1000 L or < 1 m**2); Emiliania huxleyi; Growth/Morphology; Haptophyta; Laboratory experiment; Laboratory strains; Not applicable; Other studied parameter or process; Pelagos; Phytoplankton; Single species
Funding:
Seventh Framework Programme (FP7), grant/award no. 211384: European Project on Ocean Acidification
Sixth Framework Programme (FP6), grant/award no. 511106: European network of excellence for Ocean Ecosystems Analysis
Coverage:
Date/Time Start: 2007-06-07T00:00:00 * Date/Time End: 2007-06-14T00:00:00
Comment:
In order to allow full comparability with other ocean acidification data sets, the R package seacarb (Lavigne and Gattuso, 2011) was used to compute a complete and consistent set of carbonate system variables, as described by Nisumaa et al. (2010). In this dataset the original values were archived in addition with the recalculated parameters (see related PI).
Parameter(s):
#NameShort NameUnitPrincipal InvestigatorMethod/DeviceComment
Experimental treatmentExp treatBiermann, Antje
DATE/TIMEDate/TimeGeocode
Experiment dayExp daydayBiermann, Antje
SalinitySalBiermann, AntjeConductivity meter (WTW, Weilheim, Gemany)
Temperature, waterTemp°CBiermann, AntjeConductivity and pH meter, pH/Cond 340i (WTW, Weilheim)
Light:Dark cycleL:Dhh:hhBiermann, Antje
Radiation, photosynthetically activePARµmol/m2/sBiermann, Antje
pHpHBiermann, AntjeConductivity and pH meter, pH/Cond 340i (WTW, Weilheim)NBS scale
pH, standard deviationpH std dev±Biermann, Antje
10 Alkalinity, totalATµmol/kgBiermann, AntjeAlkalinity, Gran titration (Gran, 1950)
11 Alkalinity, total, standard deviationAT std dev±Biermann, Antje
12 Partial pressure of carbon dioxide (water) at sea surface temperature (wet air)pCO2water_SST_wetµatmBiermann, AntjeCalculated using CO2SYS
13 Carbon dioxide, partial pressure, standard deviationpCO2 std dev±Biermann, Antje
14 Calcite saturation stateOmega CalBiermann, AntjeCalculated using CO2SYS
15 Calcite saturation state, standard deviationOmega Cal std dev±Biermann, Antje
16 Particles, volume concentrationPart vol concmm3/lBiermann, Antje
17 Particles, volume concentration, standard deviationPart vol conc std dev±Biermann, Antje
18 Carbon, total, particulateTPCµg/lBiermann, AntjeElement analyser CNS, EURO EA
19 Carbon, total, particulate, standard deviationTPC std dev±Biermann, Antje
20 Carbon, organic, particulatePOCmg/lBiermann, AntjeElement analyser CNS, EURO EA
21 Carbon, organic, particulate, standard deviationPOC std dev±Biermann, Antje
22 Carbon, inorganic, particulatePICµg/lBiermann, AntjeCalculated
23 Carbon, inorganic, particulate, standard deviationPIC std dev±Biermann, Antje
24 Nitrogen, total, particulateTPNµg/lBiermann, AntjeElement analyser CNS, EURO EA
25 Nitrogen, total, standard deviationTN std dev±Biermann, Antje
26 Bacteria, dry massBact dmmg/lBiermann, AntjeFACSCalibur flow-cytometer (Becton Dickinson)
27 Bacteria, dry mass, standard deviationBact DW std dev±Biermann, Antje
28 BacteriaBact#/mlBiermann, Antje
29 Bacteria, abundance, standard deviationBact abund std dev±Biermann, Antje
30 Sinking velocitySinking Vcm/sBiermann, Antjesee reference(s)
31 Sinking velocity, standard deviationSinking V std dev±Biermann, Antje
32 Cells equivalent spherical diameterESDcmBiermann, Antjesee reference(s)
33 Cells equivalent spherical diameter, standard deviationESD std dev±Biermann, Antje
34 DensityDensityg/cm3Biermann, Antjesee reference(s)
35 Density, standard deviationDensity std dev±Biermann, Antje
36 PorosityPoros% volBiermann, Antjesee reference(s)
37 Porosity, standard deviationPoros std dev±Biermann, Antje
38 Particulate inorganic carbon/particulate organic carbon ratioPIC/POCBiermann, Antje
39 Particulate inorganic carbon/particulate organic carbon ratio, standard deviationPIC/POC ratio std dev±Biermann, Antje
40 Carbonate system computation flagCSC flagNisumaa, Anne-MarinCalculated using seacarb after Nisumaa et al. (2010)
41 pHpHNisumaa, Anne-MarinCalculated using seacarb after Nisumaa et al. (2010)Total scale
42 Carbon dioxideCO2µmol/kgNisumaa, Anne-MarinCalculated using seacarb after Nisumaa et al. (2010)
43 Partial pressure of carbon dioxide (water) at sea surface temperature (wet air)pCO2water_SST_wetµatmNisumaa, Anne-MarinCalculated using seacarb after Nisumaa et al. (2010)
44 Fugacity of carbon dioxide (water) at sea surface temperature (wet air)fCO2water_SST_wetµatmNisumaa, Anne-MarinCalculated using seacarb after Nisumaa et al. (2010)
45 Bicarbonate ion[HCO3]-µmol/kgNisumaa, Anne-MarinCalculated using seacarb after Nisumaa et al. (2010)
46 Carbonate ion[CO3]2-µmol/kgNisumaa, Anne-MarinCalculated using seacarb after Nisumaa et al. (2010)
47 Carbon, inorganic, dissolvedDICµmol/kgNisumaa, Anne-MarinCalculated using seacarb after Nisumaa et al. (2010)
48 Aragonite saturation stateOmega ArgNisumaa, Anne-MarinCalculated using seacarb after Nisumaa et al. (2010)
49 Calcite saturation stateOmega CalNisumaa, Anne-MarinCalculated using seacarb after Nisumaa et al. (2010)
Status:
Curation Level: Enhanced curation (CurationLevelC)
Size:
246 data points

Data

Download dataset as tab-delimited text — use the following character encoding:


Exp treat

Date/Time

Exp day [day]

Sal
(Conductivity meter (WTW, Weil...)

Temp [°C]
(Conductivity and pH meter, pH...)

L:D [hh:hh]

PAR [µmol/m2/s]

pH
(NBS scale, Conductivity and p...)

pH std dev [±]
10 
AT [µmol/kg]
(Alkalinity, Gran titration (G...)
11 
AT std dev [±]
12 
pCO2water_SST_wet [µatm]
(Calculated using CO2SYS)
13 
pCO2 std dev [±]
14 
Omega Cal
(Calculated using CO2SYS)
15 
Omega Cal std dev [±]
16 
Part vol conc [mm3/l]
17 
Part vol conc std dev [±]
18 
TPC [µg/l]
(Element analyser CNS, EURO EA)
19 
TPC std dev [±]
20 
POC [mg/l]
(Element analyser CNS, EURO EA)
21 
POC std dev [±]
22 
PIC [µg/l]
(Calculated)
23 
PIC std dev [±]
24 
TPN [µg/l]
(Element analyser CNS, EURO EA)
25 
TN std dev [±]
26 
Bact dm [mg/l]
(FACSCalibur flow-cytometer (B...)
27 
Bact DW std dev [±]
28 
Bact [#/ml]
29 
Bact abund std dev [±]
30 
Sinking V [cm/s]
(see reference(s))
31 
Sinking V std dev [±]
32 
ESD [cm]
(see reference(s))
33 
ESD std dev [±]
34 
Density [g/cm3]
(see reference(s))
35 
Density std dev [±]
36 
Poros [% vol]
(see reference(s))
37 
Poros std dev [±]
38 
PIC/POC
39 
PIC/POC ratio std dev [±]
40 
CSC flag
(Calculated using seacarb afte...)
41 
pH
(Total scale, Calculated using...)
42 
CO2 [µmol/kg]
(Calculated using seacarb afte...)
43 
pCO2water_SST_wet [µatm]
(Calculated using seacarb afte...)
44 
fCO2water_SST_wet [µatm]
(Calculated using seacarb afte...)
45 
[HCO3]- [µmol/kg]
(Calculated using seacarb afte...)
46 
[CO3]2- [µmol/kg]
(Calculated using seacarb afte...)
47 
DIC [µmol/kg]
(Calculated using seacarb afte...)
48 
Omega Arg
(Calculated using seacarb afte...)
49 
Omega Cal
(Calculated using seacarb afte...)
Low CO22007-06-071432.317.516:082189.3106946.382.8029900138019.001.42109002590213080778.064.57270000.5790.177269.180.133.573.55223.54257.23480.904.026.25
Medium CO22007-06-071432.317.516:082188.410071022.3112.004730046533.800.98135001040190082908.048.532000000.3990.041268.233.60102.19101.84719.6793.03816.301.452.26
High CO22007-06-071432.316.716:082187.815466541.391.0040700202031.901.53942040001860114750.0110.019500000.2980.140267.7123.54653.50651.221403.2053.361480.100.831.30
Low CO2 (AGG)2007-06-142132.316.916:082188.80.210632433264.21.05.770.9213703531.220.331501001344839.915.82770001220001.5000.4390.2680.0850.001690.0023799.90.200.1270.096268.680.9025.2425.15504.42180.17685.502.814.38
Medium CO2 (AGG)2007-06-142132.316.416:082187.90.114151214961271.40.110.203.5531908043.010.512153031473537.415.23450001760000.8560.3010.2240.0450.001720.0010799.80.100.0630.084267.7818.11498.33496.581261.8655.831335.800.871.36
High CO2 (AGG)2007-06-142132.316.516:082187.60.019997314312281.10.119.506.33583014505.811.41130953119538.216.55510003030000.4240.1900.3670.0900.004240.00345100.00.030.0230.017267.4854.111493.571488.351892.8842.111989.100.661.02