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Heinemann, Agnes; Fietzke, Jan; Melzner, Frank; Böhm, Florian; Thomsen, Jörn; Garbe-Schönberg, Dieter; Eisenhauer, Anton (2012): Seawater carbonate chemistry and conditions of Mytilus edulis extracellular body fluids and shell composition in a pH-treatment experiment: Acid-base status, trace elements and delta11B, 2012 [dataset]. PANGAEA, https://doi.org/10.1594/PANGAEA.778194, Supplement to: Heinemann, A et al. (2012): Conditions of Mytilus edulis extracellular body fluids and shell composition in a pH-treatment experiment: Acid-base status, trace elements and d11B. Geochemistry, Geophysics, Geosystems, 13, Q01005, https://doi.org/10.1029/2011GC003790

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Abstract:
Mytilus edulis were cultured for 3 months under six different seawater pCO2 levels ranging from 380 to 4000 µatm. Specimen were taken from Kiel Fjord (Western Baltic Sea, Germany) which is a habitat with high and variable seawater pCO2 and related shifts in carbonate system speciation (e.g., low pH and low CaCO3 saturation state). Hemolymph (HL) and extrapallial fluid (EPF) samples were analyzed for pH and total dissolved inorganic carbon (CT) to calculate pCO2 and [HCO3]. A second experiment was conducted for 2 months with three different pCO2 levels (380, 1400 and 4000 µatm). Boron isotopes (delta11B) were investigated by LA-MC-ICP-MS (Laser Ablation-Multicollector-Inductively Coupled Plasma-Mass Spectrometry) in shell portions precipitated during experimental treatment time. Additionally, elemental ratios (B/Ca, Mg/Ca and Sr/Ca) in the EPF of specimen from the second experiment were measured via ICP-OES (Inductively Coupled Plasma-Optical Emission Spectrometry). Extracellular pH was not significantly different in HL and EPF but systematically lower than ambient water pH. This is due to high extracellular pCO2 values, a prerequisite for metabolic CO2 excretion. No accumulation of extracellular [HCO3] was measured. Elemental ratios (B/Ca, Mg/Ca and Sr/Ca) in the EPF increased slightly with pH which is in accordance with increasing growth and calcification rates at higher seawater pH values. Boron isotope ratios were highly variable between different individuals but also within single shells. This corresponds to a high individual variability in fluid B/Ca ratios and may be due to high boron concentrations in the organic parts of the shell. The mean delta11B value shows no trend with pH but appears to represent internal pH (EPF) rather than ambient water pH.
Keyword(s):
Acid-base regulation; Animalia; Baltic Sea; Benthic animals; Benthos; Biomass/Abundance/Elemental composition; Bottles or small containers/Aquaria (<20 L); Calcification/Dissolution; Coast and continental shelf; Growth/Morphology; Laboratory experiment; Mollusca; Mytilus edulis; Single species; Temperate
Funding:
Seventh Framework Programme (FP7), grant/award no. 211384: European Project on Ocean Acidification
Sixth Framework Programme (FP6), grant/award no. 511106: European network of excellence for Ocean Ecosystems Analysis
Comment:
In order to allow full comparability with other ocean acidification data sets, the R package seacarb (Lavigne and Gattuso, 2011) was used to compute a complete and consistent set of carbonate system variables, as described by Nisumaa et al. (2010). In this dataset the original values were archived in addition with the recalculated parameters (see related PI).
Parameter(s):
#NameShort NameUnitPrincipal InvestigatorMethod/DeviceComment
IdentificationIDFietzke, Jan
Experimental treatmentExp treatFietzke, Jan
SalinitySalFietzke, JanConductivity meter (WTW, Weilheim, Gemany)
Salinity, standard deviationSal std dev±Fietzke, Jan
Temperature, waterTemp°CFietzke, JanConductivity meter (WTW, Weilheim, Gemany)
Temperature, standard deviationT std dev±Fietzke, Jan
pHpHFietzke, JanConductivity meter (WTW, Weilheim, Gemany)NBS scale
pH, standard deviationpH std dev±Fietzke, Jan
Alkalinity, totalATµmol/kgFietzke, JanMeasured
10 Alkalinity, total, standard deviationAT std dev±Fietzke, Jan
11 Carbon, inorganic, dissolvedDICµmol/kgFietzke, JanAutomated CO2 analyzer (CIBA-Corning 965, UK)
12 Carbon, inorganic, dissolved, standard deviationDIC std dev±Fietzke, Jan
13 Partial pressure of carbon dioxide (water) at sea surface temperature (wet air)pCO2water_SST_wetµatmFietzke, JanCalculated using CO2SYS
14 Carbon dioxide, partial pressure, standard deviationpCO2 std dev±Fietzke, Jan
15 Calcite saturation stateOmega CalFietzke, JanCalculated using CO2SYS
16 Calcite saturation state, standard deviationOmega Cal std dev±Fietzke, Jan
17 Aragonite saturation stateOmega ArgFietzke, JanCalculated using CO2SYS
18 Aragonite saturation state, standard deviationOmega Arg std dev±Fietzke, Jan
19 Mytilus edulis, extrapallial fluid pHM. edulis pH (epf)Fietzke, JanConductivity meter (WTW, Weilheim, Gemany)
20 Mytilus edulis, extrapallial fluid pH, standard deviationM. edulis pH (epf) std dev±Fietzke, Jan
21 ReplicatesRepl#Fietzke, JanEPF pH
22 Mytilus edulis, haemolymph, pHM. edulis pH (ha)Fietzke, JanConductivity meter (WTW, Weilheim, Gemany)
23 Mytilus edulis, haemolymph, pH, standard deviationM. edulis pH (ha) std dev±Fietzke, Jan
24 ReplicatesRepl#Fietzke, JanHL pH
25 pHpHFietzke, JanOn sampling day in water
26 Mytilus edulis, extrapallial fluid total carbonM. edulis DIC (epf)mmol/lFietzke, JanAutomated CO2 analyzer (CIBA-Corning 965, UK)
27 Mytilus edulis, extrapallial fluid total carbon, standard deviationM. edulis DIC (epf) std dev±Fietzke, Jan
28 ReplicatesRepl#Fietzke, JanEPF DIC
29 Mytilus edulis, haemolymph, total dissolved inorganic carbonM. edulis DIC (ha)mmol/lFietzke, JanAutomated CO2 analyzer (CIBA-Corning 965, UK)
30 Mytilus edulis, haemolymph, total dissolved inorganic carbon, standard deviationM. edulis DIC (ha) std dev±Fietzke, Jan
31 ReplicatesRepl#Fietzke, JanHL DIC
32 Carbon, inorganic, dissolvedDICµmol/lFietzke, JanAutomated CO2 analyzer (CIBA-Corning 965, UK)On sampling day in water
33 Mytilus edulis, extrapallial fluid partial pressure of carbon dioxideM. edulis pCO2 (epf)µatmFietzke, JanCalculated, see reference(s)
34 Mytilus edulis, extrapallial fluid partial pressure of carbon dioxide, standard deviationM. edulis pCO2 (epf) std dev±Fietzke, Jan
35 ReplicatesRepl#Fietzke, JanEPF pCO2
36 Mytilus edulis, haemolymph, partial pressure of carbon dioxideM. edulis pCO2 (ha)µatmFietzke, JanCalculated, see reference(s)
37 Mytilus edulis, haemolymph, partial pressure of carbon dioxide, standard deviationM. edulis pCO2 (ha) std dev±Fietzke, Jan
38 ReplicatesRepl#Fietzke, JanHL pCO2
39 Partial pressure of carbon dioxide (water) at sea surface temperature (wet air)pCO2water_SST_wetµatmFietzke, JanCalculated using CO2SYSOn sampling day in water
40 Mytilus edulis, extrapallial fluid bicarbonateM. edulis HCO3 (epf)mmol/lFietzke, JanCalculated, see reference(s)
41 Mytilus edulis, extrapallial fluid bicarbonate, standard deviationM. edulis HCO3 (epf) std dev±Fietzke, Jan
42 ReplicatesRepl#Fietzke, JanEPF HCO3
43 Mytilus edulis, haemolymph, bicarbonate ionM. edulis [HCO3]- (ha)mmol/lFietzke, JanCalculated, see reference(s)
44 Mytilus edulis, haemolymph, bicarbonate ion, standard deviationM. edulis [HCO3]- (ha) std dev±Fietzke, Jan
45 ReplicatesRepl#Fietzke, JanHL HCO3
46 Bicarbonate[HCO3]-µmol/lFietzke, JanOn sampling day in water
47 Mytilus edulis, extrapallial fluid carbonate ionM. edulis CO3 (epf)µmol/lFietzke, JanCalculated, see reference(s)
48 Mytilus edulis, extrapallial fluid carbonate ion, standard deviationM. edulis CO3 (epf) std dev±Fietzke, Jan
49 ReplicatesRepl#Fietzke, JanEPF CO3
50 Mytilus edulis, haemolymph, carbonate ionM. edulis [CO3]2- (ha)µmol/lFietzke, JanCalculated, see reference(s)
51 Mytilus edulis, haemolymph, carbonate ion, standard deviationM. edulis [CO3]2- (ha) std dev±Fietzke, Jan
52 ReplicatesRepl#Fietzke, JanHL CO3
53 Carbonate ion[CO3]2-µmol/lFietzke, JanCalculated using CO2SYSOn sampling day in water
54 Mytilus edulis, extrapallial fluid pHM. edulis pH (epf)Fietzke, JanConductivity meter (WTW, Weilheim, Gemany)
55 Mytilus edulis, shell mass growthM. edulis Wµ%Fietzke, Jan
56 Mytilus edulis, extrapallial fluid, boron/calcium ratioM. edulis B/Ca (epf)mmol/molFietzke, JanICP-OES, Inductively coupled plasma - optical emission spectrometry
57 Mytilus edulis, extrapallial fluid, boron/calcium ratio, standard deviationM. edulis B/Ca (epf) std dev±Fietzke, Jan
58 ReplicatesRepl#Fietzke, JanEPF B/Ca
59 Boron/Calcium ratioB/Caµmol/molFietzke, JanICP-OES, Inductively coupled plasma - optical emission spectrometryOn sampling day in water
60 Boron/Calcium ratio, standard deviationB/Ca std dev±Fietzke, Jan
61 ReplicatesRepl#Fietzke, JanWater B/Ca
62 Mytilus edulis, extrapallial fluid, strontium/calcium ratioM. edulis Sr/Ca (epf)mmol/molFietzke, JanICP-OES, Inductively coupled plasma - optical emission spectrometry
63 Mytilus edulis, extrapallial fluid, strontium/calcium ratio, standard deviationM. edulis Sr/Ca (epf) std dev±Fietzke, Jan
64 ReplicatesRepl#Fietzke, JanEPF Sr/Ca
65 Strontium/Calcium ratioSr/Cammol/molFietzke, JanICP-OES, Inductively coupled plasma - optical emission spectrometryOn sampling day in water
66 Strontium/Calcium ratio, standard deviationSr/Ca std dev±Fietzke, Jan
67 ReplicatesRepl#Fietzke, JanWater Sr/Ca
68 Mytilus edulis, extrapallial fluid, magnesium/calcium ratioM. edulis Mg/Ca (epf)mmol/molFietzke, JanICP-OES, Inductively coupled plasma - optical emission spectrometry
69 Mytilus edulis, extrapallial fluid, magnesium/calcium ratio, standard deviationM. edulis Mg/Ca (epf) std dev±Fietzke, Jan
70 ReplicatesRepl#Fietzke, JanEPF Mg/Ca
71 Magnesium/Calcium ratioMg/Cammol/molFietzke, JanICP-OES, Inductively coupled plasma - optical emission spectrometryOn sampling day in water
72 Magnesium/Calcium ratio, standard deviationMg/Ca std dev±Fietzke, Jan
73 ReplicatesRepl#Fietzke, JanWater Mg/Ca
74 Mytilus edulis, shell, δ11BM. edulis δ11BFietzke, Jan
75 Mytilus edulis, shell, δ11B, standard deviationM. edulis δ11B std dev±Fietzke, Jan
76 ReplicatesRepl#Fietzke, Jandelta11B
77 Mytilus edulis, shell lengthM. edulis shell LmmFietzke, Jan
78 Mytilus edulis, shell length, standard deviationM. edulis sl std dev±Fietzke, Jan
79 ReplicatesRepl#Fietzke, JanM. edulis L
80 Experimental treatmentExp treatNisumaa, Anne-MarinCalculated using seacarb after Nisumaa et al. (2010)
81 pHpHNisumaa, Anne-MarinCalculated using seacarb after Nisumaa et al. (2010)Total scale
82 Carbon dioxideCO2µmol/kgNisumaa, Anne-MarinCalculated using seacarb after Nisumaa et al. (2010)
83 Partial pressure of carbon dioxide (water) at sea surface temperature (wet air)pCO2water_SST_wetµatmNisumaa, Anne-MarinCalculated using seacarb after Nisumaa et al. (2010)
84 Fugacity of carbon dioxide (water) at sea surface temperature (wet air)fCO2water_SST_wetµatmNisumaa, Anne-MarinCalculated using seacarb after Nisumaa et al. (2010)
85 Bicarbonate ion[HCO3]-µmol/kgNisumaa, Anne-MarinCalculated using seacarb after Nisumaa et al. (2010)
86 Carbonate ion[CO3]2-µmol/kgNisumaa, Anne-MarinCalculated using seacarb after Nisumaa et al. (2010)
87 Aragonite saturation stateOmega ArgNisumaa, Anne-MarinCalculated using seacarb after Nisumaa et al. (2010)
88 Calcite saturation stateOmega CalNisumaa, Anne-MarinCalculated using seacarb after Nisumaa et al. (2010)
Status:
Curation Level: Enhanced curation (CurationLevelC)
Size:
531 data points

Data

Download dataset as tab-delimited text — use the following character encoding:


ID

Exp treat

Sal
(Conductivity meter (WTW, Weil...)

Sal std dev [±]

Temp [°C]
(Conductivity meter (WTW, Weil...)

T std dev [±]

pH
(NBS scale, Conductivity meter...)

pH std dev [±]

AT [µmol/kg]
(Measured)
10 
AT std dev [±]
11 
DIC [µmol/kg]
(Automated CO2 analyzer (CIBA-...)
12 
DIC std dev [±]
13 
pCO2water_SST_wet [µatm]
(Calculated using CO2SYS)
14 
pCO2 std dev [±]
15 
Omega Cal
(Calculated using CO2SYS)
16 
Omega Cal std dev [±]
17 
Omega Arg
(Calculated using CO2SYS)
18 
Omega Arg std dev [±]
19 
M. edulis pH (epf)
(Conductivity meter (WTW, Weil...)
20 
M. edulis pH (epf) std dev [±]
21 
Repl [#]
(EPF pH)
22 
M. edulis pH (ha)
(Conductivity meter (WTW, Weil...)
23 
M. edulis pH (ha) std dev [±]
24 
Repl [#]
(HL pH)
25 
pH
(On sampling day in water)
26 
M. edulis DIC (epf) [mmol/l]
(Automated CO2 analyzer (CIBA-...)
27 
M. edulis DIC (epf) std dev [±]
28 
Repl [#]
(EPF DIC)
29 
M. edulis DIC (ha) [mmol/l]
(Automated CO2 analyzer (CIBA-...)
30 
M. edulis DIC (ha) std dev [±]
31 
Repl [#]
(HL DIC)
32 
DIC [µmol/l]
(On sampling day in water, Aut...)
33 
M. edulis pCO2 (epf) [µatm]
(Calculated, see reference(s))
34 
M. edulis pCO2 (epf) std dev [±]
35 
Repl [#]
(EPF pCO2)
36 
M. edulis pCO2 (ha) [µatm]
(Calculated, see reference(s))
37 
M. edulis pCO2 (ha) std dev [±]
38 
Repl [#]
(HL pCO2)
39 
pCO2water_SST_wet [µatm]
(On sampling day in water, Cal...)
40 
M. edulis HCO3 (epf) [mmol/l]
(Calculated, see reference(s))
41 
M. edulis HCO3 (epf) std dev [±]
42 
Repl [#]
(EPF HCO3)
43 
M. edulis [HCO3]- (ha) [mmol/l]
(Calculated, see reference(s))
44 
M. edulis [HCO3]- (ha) std dev [±]
45 
Repl [#]
(HL HCO3)
46 
[HCO3]- [µmol/l]
(On sampling day in water)
47 
M. edulis CO3 (epf) [µmol/l]
(Calculated, see reference(s))
48 
M. edulis CO3 (epf) std dev [±]
49 
Repl [#]
(EPF CO3)
50 
M. edulis [CO3]2- (ha) [µmol/l]
(Calculated, see reference(s))
51 
M. edulis [CO3]2- (ha) std dev [±]
52 
Repl [#]
(HL CO3)
53 
[CO3]2- [µmol/l]
(On sampling day in water, Cal...)
54 
M. edulis pH (epf)
(Conductivity meter (WTW, Weil...)
55 
M. edulis Wµ [%]
56 
M. edulis B/Ca (epf) [mmol/mol]
(ICP-OES, Inductively coupled ...)
57 
M. edulis B/Ca (epf) std dev [±]
58 
Repl [#]
(EPF B/Ca)
59 
B/Ca [µmol/mol]
(On sampling day in water, ICP...)
60 
B/Ca std dev [±]
61 
Repl [#]
(Water B/Ca)
62 
M. edulis Sr/Ca (epf) [mmol/mol]
(ICP-OES, Inductively coupled ...)
63 
M. edulis Sr/Ca (epf) std dev [±]
64 
Repl [#]
(EPF Sr/Ca)
65 
Sr/Ca [mmol/mol]
(On sampling day in water, ICP...)
66 
Sr/Ca std dev [±]
67 
Repl [#]
(Water Sr/Ca)
68 
M. edulis Mg/Ca (epf) [mmol/mol]
(ICP-OES, Inductively coupled ...)
69 
M. edulis Mg/Ca (epf) std dev [±]
70 
Repl [#]
(EPF Mg/Ca)
71 
Mg/Ca [mmol/mol]
(On sampling day in water, ICP...)
72 
Mg/Ca std dev [±]
73 
Repl [#]
(Water Mg/Ca)
74 
M. edulis δ11B []
75 
M. edulis δ11B std dev [±]
76 
Repl [#]
(delta11B)
77 
M. edulis shell L [mm]
78 
M. edulis sl std dev [±]
79 
Repl [#]
(M. edulis L)
80 
Exp treat
(Calculated using seacarb afte...)
81 
pH
(Total scale, Calculated using...)
82 
CO2 [µmol/kg]
(Calculated using seacarb afte...)
83 
pCO2water_SST_wet [µatm]
(Calculated using seacarb afte...)
84 
fCO2water_SST_wet [µatm]
(Calculated using seacarb afte...)
85 
[HCO3]- [µmol/kg]
(Calculated using seacarb afte...)
86 
[CO3]2- [µmol/kg]
(Calculated using seacarb afte...)
87 
Omega Arg
(Calculated using seacarb afte...)
88 
Omega Cal
(Calculated using seacarb afte...)
Experiment 1pCO2=38718.81.612.10.68.020.08203174196563577951.800.301.100.207.520.0437.540.0538.101.790.1831.630.31319601938933164818334521.700.1831.550.30318500.0280.00530.0270.009385.00157.9225.40567.11565.011872.2267.391.051.76
Experiment 1pCO2=56018.81.612.10.67.930.07203174198862722971.500.200.900.107.500.0947.530.0538.011.410.0341.620.243198017174274162319035741.330.0441.540.23318900.0200.00540.0270.005370.00157.8331.95713.52710.881900.8455.210.861.44
Experiment 1pCO2=84018.81.612.10.67.860.05203272200465839801.300.200.800.107.460.0537.520.0437.911.710.1831.790.213201022972843198738337311.610.1731.700.19319200.0220.00430.0270.003356.00157.7737.35834.03830.951918.5348.120.751.26
Experiment 1pCO2=112018.81.612.10.67.770.052033732026661041931.100.100.500.107.450.0237.470.0547.821.550.0731.770.144203020331693222634849061.460.0731.670.13419400.0200.00130.0240.003447.00157.6846.591040.401036.551939.9739.440.621.03
Experiment 1pCO2=140018.81.612.10.67.710.052033732040661195980.900.100.600.107.410.0447.470.0747.731.850.0531.610.3442050261118142199744411231.730.0641.520.31419600.0230.00340.0210.003438.00157.6253.901203.551199.101951.6034.500.540.90
Experiment 1pCO2=400018.81.612.10.67.280.0820407221726633525660.400.100.200.047.340.0947.370.0247.391.910.0741.890.3142150343069643122578427241.770.0841.750.28420200.0190.00440.0190.003417.00157.18149.843345.943333.572009.0113.150.210.34
Experiment 2pCO2=38718.81.612.10.68.130.021966318915500301.940.041.140.047.54624256.201.0850.05430.001538.100.0968.090.0534947546485922317.43.11022.92.410157.9722.20495.73493.901797.7271.081.111.86
Experiment 2pCO2=140018.81.612.10.67.720.061968519841213502000.810.090.480.067.39623655.003.5650.05390.003748.050.1258.130.044487812554974124418.34.81124.01.411157.5757.711288.611283.841895.8830.410.480.79
Experiment 2pCO2=400018.81.612.10.67.260.041970421261339502200.280.020.170.017.22115852.702.7160.05310.002148.060.0868.130.12448176264898116417.95.51120.71.911157.11170.783813.563799.461944.4110.810.170.28