Citation:

nclimate1200

Name: Seawater carbonate chemistry and Cladocora caespitosa gross calcification during experiments, 2011
Published: 2011
License: https://creativecommons.org/licenses/by/3.0/
Keywords: Animalia; Benthic animals; Benthos; Calcification/Dissolution; Cladocora caespitosa; Cnidaria; CO2 vent; Coast and continental shelf; Field experiment; Single species; Temperate; Temperature

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Keyword(s):

Animalia; Benthic animals; Benthos; Calcification/Dissolution; Cladocora caespitosa; Cnidaria; CO2 vent; Coast and continental shelf; Field experiment; Single species; Temperate; Temperature

Project(s):

European network of excellence for Ocean Ecosystems Analysis (EUR-OCEANS)

European Project on Ocean Acidification (EPOCA)

Mediterranean Sea Acidification in a Changing Climate (MedSeA)

Funding:

Seventh Framework Programme (FP7), grant/award no. 211384 : European Project on Ocean Acidification

Seventh Framework Programme (FP7), grant/award no. 265103 : Mediterranean Sea Acidification in a Changing Climate

Sixth Framework Programme (FP6), grant/award no. 511106 : European network of excellence for Ocean Ecosystems Analysis

Comment:

In order to allow full comparability with other ocean acidification data sets, the R package seacarb (Lavigne and Gattuso, 2011) was used to compute a complete and consistent set of carbonate system variables, as described by Nisumaa et al. (2010). In this dataset the original values were archived in addition with the recalculated parameters (see related PI).

Parameter(s):

#	Name	Short Name	Unit	Principal Investigator	Method/Device	Comment
1	Experimental treatment	Exp treat		Rodolfo-Metalpa, Riccardo
2	Identification	ID		Rodolfo-Metalpa, Riccardo
3	Species	Species		Rodolfo-Metalpa, Riccardo
4	Salinity	Sal		Rodolfo-Metalpa, Riccardo
5	Temperature, water	Temp	°C	Rodolfo-Metalpa, Riccardo
6	Temperature, standard deviation	T std dev	±	Rodolfo-Metalpa, Riccardo
7	pH	pH		Rodolfo-Metalpa, Riccardo	Measured	Total scale
8	pH, standard deviation	pH std dev	±	Rodolfo-Metalpa, Riccardo
9	Alkalinity, total	AT	µmol/kg	Rodolfo-Metalpa, Riccardo	Alkalinity, Gran titration (Gran, 1950)
10	Gross calcification rate of calcium carbonate	GC CaCO3	nmol/g/h	Rodolfo-Metalpa, Riccardo	**45Ca incorporation
11	Partial pressure of carbon dioxide (water) at sea surface temperature (wet air)	pCO2water_SST_wet	µatm	Rodolfo-Metalpa, Riccardo	Calculated using CO2SYS
12	Carbon dioxide, partial pressure, standard deviation	pCO2 std dev	±	Rodolfo-Metalpa, Riccardo
13	Carbon dioxide	CO2	µmol/kg	Rodolfo-Metalpa, Riccardo	Calculated using CO2SYS
14	Carbon dioxide, standard deviation	CO2 std dev	±	Rodolfo-Metalpa, Riccardo
15	Carbonate ion	[CO3]2-	µmol/kg	Rodolfo-Metalpa, Riccardo	Calculated using CO2SYS
16	Carbonate ion, standard deviation	[CO3]2- std dev	±	Rodolfo-Metalpa, Riccardo
17	Bicarbonate ion	[HCO3]-	µmol/kg	Rodolfo-Metalpa, Riccardo	Calculated using CO2SYS
18	Bicarbonate ion, standard deviation	[HCO3]- std dev	±	Rodolfo-Metalpa, Riccardo
19	Carbon, inorganic, dissolved	DIC	µmol/kg	Rodolfo-Metalpa, Riccardo	Calculated using CO2SYS
20	Carbon, inorganic, dissolved, standard deviation	DIC std dev	±	Rodolfo-Metalpa, Riccardo
21	Calcite saturation state	Omega Cal		Rodolfo-Metalpa, Riccardo	Calculated using CO2SYS
22	Calcite saturation state, standard deviation	Omega Cal std dev	±	Rodolfo-Metalpa, Riccardo
23	Aragonite saturation state	Omega Arg		Rodolfo-Metalpa, Riccardo	Calculated using CO2SYS
24	Aragonite saturation state, standard deviation	Omega Arg std dev	±	Rodolfo-Metalpa, Riccardo
25	Carbonate system computation flag	CSC flag		Nisumaa, Anne-Marin	Calculated using seacarb after Nisumaa et al. (2010)
26	Carbon dioxide	CO2	µmol/kg	Nisumaa, Anne-Marin	Calculated using seacarb after Nisumaa et al. (2010)
27	Partial pressure of carbon dioxide (water) at sea surface temperature (wet air)	pCO2water_SST_wet	µatm	Nisumaa, Anne-Marin	Calculated using seacarb after Nisumaa et al. (2010)
28	Fugacity of carbon dioxide (water) at sea surface temperature (wet air)	fCO2water_SST_wet	µatm	Nisumaa, Anne-Marin	Calculated using seacarb after Nisumaa et al. (2010)
29	Bicarbonate ion	[HCO3]-	µmol/kg	Nisumaa, Anne-Marin	Calculated using seacarb after Nisumaa et al. (2010)
30	Carbonate ion	[CO3]2-	µmol/kg	Nisumaa, Anne-Marin	Calculated using seacarb after Nisumaa et al. (2010)
31	Carbon, inorganic, dissolved	DIC	µmol/kg	Nisumaa, Anne-Marin	Calculated using seacarb after Nisumaa et al. (2010)
32	Aragonite saturation state	Omega Arg		Nisumaa, Anne-Marin	Calculated using seacarb after Nisumaa et al. (2010)
33	Calcite saturation state	Omega Cal		Nisumaa, Anne-Marin	Calculated using seacarb after Nisumaa et al. (2010)

License:

Creative Commons Attribution 3.0 Unported (CC-BY-3.0)

Size:

1584 data points

Data

Download dataset as tab-delimited text — use the following character encoding:

1 Exp treat	2 ID	3 Species	4 Sal	5 Temp [°C]	6 T std dev [±]	7 pH (Total scale, Measured)	8 pH std dev [±]	9 AT [µmol/kg] (Alkalinity, Gran titration (G...)	10 GC CaCO3 [nmol/g/h] (**45Ca incorporation)	11 pCO2water_SST_wet [µatm] (Calculated using CO2SYS)	12 pCO2 std dev [±]	13 CO2 [µmol/kg] (Calculated using CO2SYS)	14 CO2 std dev [±]	15 [CO3]2- [µmol/kg] (Calculated using CO2SYS)	16 [CO3]2- std dev [±]	17 [HCO3]- [µmol/kg] (Calculated using CO2SYS)	18 [HCO3]- std dev [±]	19 DIC [µmol/kg] (Calculated using CO2SYS)	20 DIC std dev [±]	21 Omega Cal (Calculated using CO2SYS)	22 Omega Cal std dev [±]	23 Omega Arg (Calculated using CO2SYS)	24 Omega Arg std dev [±]	25 CSC flag (Calculated using seacarb afte...)	26 CO2 [µmol/kg] (Calculated using seacarb afte...)	27 pCO2water_SST_wet [µatm] (Calculated using seacarb afte...)	28 fCO2water_SST_wet [µatm] (Calculated using seacarb afte...)	29 [HCO3]- [µmol/kg] (Calculated using seacarb afte...)	30 [CO3]2- [µmol/kg] (Calculated using seacarb afte...)	31 DIC [µmol/kg] (Calculated using seacarb afte...)	32 Omega Arg (Calculated using seacarb afte...)	33 Omega Cal (Calculated using seacarb afte...)
Site pH 7.4	Tank-A	Cladocora caespitosa	38	22.4	0.5	7.5	0.1	2538	263.8	1953	238	2344	22	80	9	59	8	2484	20	1.7	0.2	1.2	0.1	8	53.81	1806.20	1800.33	2347.81	77.96	2479.58	1.20	1.82
Site pH 7.4	Tank-A	Cladocora caespitosa	38	22.4	0.5	7.5	0.1	2538	275.6	1953	238	2344	22	80	9	59	8	2484	20	1.7	0.2	1.2	0.1	8	53.81	1806.20	1800.33	2347.81	77.96	2479.58	1.20	1.82
Site pH 7.4	Tank-A	Cladocora caespitosa	38	22.4	0.5	7.5	0.1	2538	283.8	1953	238	2344	22	80	9	59	8	2484	20	1.7	0.2	1.2	0.1	8	53.81	1806.20	1800.33	2347.81	77.96	2479.58	1.20	1.82
Site pH 7.4	Tank-A	Cladocora caespitosa	38	22.4	0.5	7.5	0.1	2538	296.0	1953	238	2344	22	80	9	59	8	2484	20	1.7	0.2	1.2	0.1	8	53.81	1806.20	1800.33	2347.81	77.96	2479.58	1.20	1.82
Site pH 7.4	Tank-A	Cladocora caespitosa	38	22.4	0.5	7.5	0.1	2538	328.8	1953	238	2344	22	80	9	59	8	2484	20	1.7	0.2	1.2	0.1	8	53.81	1806.20	1800.33	2347.81	77.96	2479.58	1.20	1.82
Site pH 7.4	Tank-A	Cladocora caespitosa	38	22.4	0.5	7.5	0.1	2538	310.9	1953	238	2344	22	80	9	59	8	2484	20	1.7	0.2	1.2	0.1	8	53.81	1806.20	1800.33	2347.81	77.96	2479.58	1.20	1.82
Site pH 7.4	Tank-A	Cladocora caespitosa	38	22.4	0.5	7.5	0.1	2538	169.5	1953	238	2344	22	80	9	59	8	2484	20	1.7	0.2	1.2	0.1	8	53.81	1806.20	1800.33	2347.81	77.96	2479.58	1.20	1.82
Site pH 7.4	Tank-A	Cladocora caespitosa	38	22.4	0.5	7.5	0.1	2538	316.4	1953	238	2344	22	80	9	59	8	2484	20	1.7	0.2	1.2	0.1	8	53.81	1806.20	1800.33	2347.81	77.96	2479.58	1.20	1.82
Site pH 7.4	Tank-B	Cladocora caespitosa	38	22.4	0.5	7.5	0.1	2538	460.2	1953	238	2344	22	80	9	59	8	2484	20	1.7	0.2	1.2	0.1	8	53.81	1806.20	1800.33	2347.81	77.96	2479.58	1.20	1.82
Site pH 7.4	Tank-B	Cladocora caespitosa	38	22.4	0.5	7.5	0.1	2538	208.5	1953	238	2344	22	80	9	59	8	2484	20	1.7	0.2	1.2	0.1	8	53.81	1806.20	1800.33	2347.81	77.96	2479.58	1.20	1.82
Site pH 7.4	Tank-B	Cladocora caespitosa	38	22.4	0.5	7.5	0.1	2538	260.0	1953	238	2344	22	80	9	59	8	2484	20	1.7	0.2	1.2	0.1	8	53.81	1806.20	1800.33	2347.81	77.96	2479.58	1.20	1.82
Site pH 7.4	Tank-B	Cladocora caespitosa	38	22.4	0.5	7.5	0.1	2538	192.0	1953	238	2344	22	80	9	59	8	2484	20	1.7	0.2	1.2	0.1	8	53.81	1806.20	1800.33	2347.81	77.96	2479.58	1.20	1.82
Site pH 7.4	Tank-B	Cladocora caespitosa	38	22.4	0.5	7.5	0.1	2538	216.5	1953	238	2344	22	80	9	59	8	2484	20	1.7	0.2	1.2	0.1	8	53.81	1806.20	1800.33	2347.81	77.96	2479.58	1.20	1.82
Site pH 7.4	Tank-B	Cladocora caespitosa	38	22.4	0.5	7.5	0.1	2538	107.0	1953	238	2344	22	80	9	59	8	2484	20	1.7	0.2	1.2	0.1	8	53.81	1806.20	1800.33	2347.81	77.96	2479.58	1.20	1.82
Site pH 7.4	Tank-B	Cladocora caespitosa	38	22.4	0.5	7.5	0.1	2538	223.5	1953	238	2344	22	80	9	59	8	2484	20	1.7	0.2	1.2	0.1	8	53.81	1806.20	1800.33	2347.81	77.96	2479.58	1.20	1.82
Site pH 7.4	Tank-B	Cladocora caespitosa	38	22.4	0.5	7.5	0.1	2538	292.0	1953	238	2344	22	80	9	59	8	2484	20	1.7	0.2	1.2	0.1	8	53.81	1806.20	1800.33	2347.81	77.96	2479.58	1.20	1.82
Site pH 7.7	Tank-A	Cladocora caespitosa	38	21.9	0.7	7.7	0.0	2530	316.9	1145	77	2242	16	123	7	34	5	2398	13	2.9	0.2	1.9	0.1	8	32.83	1087.57	1084.01	2247.24	116.09	2396.16	1.78	2.71
Site pH 7.7	Tank-A	Cladocora caespitosa	38	21.9	0.7	7.7	0.0	2530	297.3	1145	77	2242	16	123	7	34	5	2398	13	2.9	0.2	1.9	0.1	8	32.83	1087.57	1084.01	2247.24	116.09	2396.16	1.78	2.71
Site pH 7.7	Tank-A	Cladocora caespitosa	38	21.9	0.7	7.7	0.0	2530	456.1	1145	77	2242	16	123	7	34	5	2398	13	2.9	0.2	1.9	0.1	8	32.83	1087.57	1084.01	2247.24	116.09	2396.16	1.78	2.71
Site pH 7.7	Tank-A	Cladocora caespitosa	38	21.9	0.7	7.7	0.0	2530	239.8	1145	77	2242	16	123	7	34	5	2398	13	2.9	0.2	1.9	0.1	8	32.83	1087.57	1084.01	2247.24	116.09	2396.16	1.78	2.71
Site pH 7.7	Tank-A	Cladocora caespitosa	38	21.9	0.7	7.7	0.0	2530	461.5	1145	77	2242	16	123	7	34	5	2398	13	2.9	0.2	1.9	0.1	8	32.83	1087.57	1084.01	2247.24	116.09	2396.16	1.78	2.71
Site pH 7.7	Tank-A	Cladocora caespitosa	38	21.9	0.7	7.7	0.0	2530	565.9	1145	77	2242	16	123	7	34	5	2398	13	2.9	0.2	1.9	0.1	8	32.83	1087.57	1084.01	2247.24	116.09	2396.16	1.78	2.71
Site pH 7.7	Tank-A	Cladocora caespitosa	38	21.9	0.7	7.7	0.0	2530	436.6	1145	77	2242	16	123	7	34	5	2398	13	2.9	0.2	1.9	0.1	8	32.83	1087.57	1084.01	2247.24	116.09	2396.16	1.78	2.71
Site pH 7.7	Tank-A	Cladocora caespitosa	38	21.9	0.7	7.7	0.0	2530	484.5	1145	77	2242	16	123	7	34	5	2398	13	2.9	0.2	1.9	0.1	8	32.83	1087.57	1084.01	2247.24	116.09	2396.16	1.78	2.71
Site pH 7.7	Tank-B	Cladocora caespitosa	38	21.9	0.7	7.7	0.0	2530	235.0	1145	77	2242	16	123	7	34	5	2398	13	2.9	0.2	1.9	0.1	8	32.83	1087.57	1084.01	2247.24	116.09	2396.16	1.78	2.71
Site pH 7.7	Tank-B	Cladocora caespitosa	38	21.9	0.7	7.7	0.0	2530	424.2	1145	77	2242	16	123	7	34	5	2398	13	2.9	0.2	1.9	0.1	8	32.83	1087.57	1084.01	2247.24	116.09	2396.16	1.78	2.71
Site pH 7.7	Tank-B	Cladocora caespitosa	38	21.9	0.7	7.7	0.0	2530	541.2	1145	77	2242	16	123	7	34	5	2398	13	2.9	0.2	1.9	0.1	8	32.83	1087.57	1084.01	2247.24	116.09	2396.16	1.78	2.71
Site pH 7.7	Tank-B	Cladocora caespitosa	38	21.9	0.7	7.7	0.0	2530	417.4	1145	77	2242	16	123	7	34	5	2398	13	2.9	0.2	1.9	0.1	8	32.83	1087.57	1084.01	2247.24	116.09	2396.16	1.78	2.71
Site pH 7.7	Tank-B	Cladocora caespitosa	38	21.9	0.7	7.7	0.0	2530	358.0	1145	77	2242	16	123	7	34	5	2398	13	2.9	0.2	1.9	0.1	8	32.83	1087.57	1084.01	2247.24	116.09	2396.16	1.78	2.71
Site pH 7.7	Tank-B	Cladocora caespitosa	38	21.9	0.7	7.7	0.0	2530	443.2	1145	77	2242	16	123	7	34	5	2398	13	2.9	0.2	1.9	0.1	8	32.83	1087.57	1084.01	2247.24	116.09	2396.16	1.78	2.71
Site pH 7.7	Tank-B	Cladocora caespitosa	38	21.9	0.7	7.7	0.0	2530	502.4	1145	77	2242	16	123	7	34	5	2398	13	2.9	0.2	1.9	0.1	8	32.83	1087.57	1084.01	2247.24	116.09	2396.16	1.78	2.71
Site pH 7.7	Tank-B	Cladocora caespitosa	38	21.9	0.7	7.7	0.0	2530	615.5	1145	77	2242	16	123	7	34	5	2398	13	2.9	0.2	1.9	0.1	8	32.83	1087.57	1084.01	2247.24	116.09	2396.16	1.78	2.71
Site pH 8.1	Tank-A	Cladocora caespitosa	38	22.6	0.5	8.0	0.1	2541	505.6	458	63	1934	107	248	41	14	2	2195	99	5.7	0.5	3.7	0.4	8	14.57	491.82	490.23	2019.26	213.62	2247.45	3.28	5.00
Site pH 8.1	Tank-A	Cladocora caespitosa	38	22.6	0.5	8.0	0.1	2541	444.6	458	63	1934	107	248	41	14	2	2195	99	5.7	0.5	3.7	0.4	8	14.57	491.82	490.23	2019.26	213.62	2247.45	3.28	5.00
Site pH 8.1	Tank-A	Cladocora caespitosa	38	22.6	0.5	8.0	0.1	2541	275.0	458	63	1934	107	248	41	14	2	2195	99	5.7	0.5	3.7	0.4	8	14.57	491.82	490.23	2019.26	213.62	2247.45	3.28	5.00
Site pH 8.1	Tank-A	Cladocora caespitosa	38	22.6	0.5	8.0	0.1	2541	315.7	458	63	1934	107	248	41	14	2	2195	99	5.7	0.5	3.7	0.4	8	14.57	491.82	490.23	2019.26	213.62	2247.45	3.28	5.00
Site pH 8.1	Tank-A	Cladocora caespitosa	38	22.6	0.5	8.0	0.1	2541	277.3	458	63	1934	107	248	41	14	2	2195	99	5.7	0.5	3.7	0.4	8	14.57	491.82	490.23	2019.26	213.62	2247.45	3.28	5.00
Site pH 8.1	Tank-A	Cladocora caespitosa	38	22.6	0.5	8.0	0.1	2541	477.9	458	63	1934	107	248	41	14	2	2195	99	5.7	0.5	3.7	0.4	8	14.57	491.82	490.23	2019.26	213.62	2247.45	3.28	5.00
Site pH 8.1	Tank-A	Cladocora caespitosa	38	22.6	0.5	8.0	0.1	2541	429.2	458	63	1934	107	248	41	14	2	2195	99	5.7	0.5	3.7	0.4	8	14.57	491.82	490.23	2019.26	213.62	2247.45	3.28	5.00
Site pH 8.1	Tank-A	Cladocora caespitosa	38	22.6	0.5	8.0	0.1	2541	463.0	458	63	1934	107	248	41	14	2	2195	99	5.7	0.5	3.7	0.4	8	14.57	491.82	490.23	2019.26	213.62	2247.45	3.28	5.00
Site pH 8.1	Tank-A	Cladocora caespitosa	38	22.6	0.5	8.0	0.1	2541	387.0	458	63	1934	107	248	41	14	2	2195	99	5.7	0.5	3.7	0.4	8	14.57	491.82	490.23	2019.26	213.62	2247.45	3.28	5.00
Site pH 8.1	Tank-B	Cladocora caespitosa	38	22.6	0.5	8.0	0.1	2541	416.9	458	63	1934	107	248	41	14	2	2195	99	5.7	0.5	3.7	0.4	8	14.57	491.82	490.23	2019.26	213.62	2247.45	3.28	5.00
Site pH 8.1	Tank-B	Cladocora caespitosa	38	22.6	0.5	8.0	0.1	2541	274.7	458	63	1934	107	248	41	14	2	2195	99	5.7	0.5	3.7	0.4	8	14.57	491.82	490.23	2019.26	213.62	2247.45	3.28	5.00
Site pH 8.1	Tank-B	Cladocora caespitosa	38	22.6	0.5	8.0	0.1	2541	147.8	458	63	1934	107	248	41	14	2	2195	99	5.7	0.5	3.7	0.4	8	14.57	491.82	490.23	2019.26	213.62	2247.45	3.28	5.00
Site pH 8.1	Tank-B	Cladocora caespitosa	38	22.6	0.5	8.0	0.1	2541	375.0	458	63	1934	107	248	41	14	2	2195	99	5.7	0.5	3.7	0.4	8	14.57	491.82	490.23	2019.26	213.62	2247.45	3.28	5.00
Site pH 8.1	Tank-B	Cladocora caespitosa	38	22.6	0.5	8.0	0.1	2541	162.9	458	63	1934	107	248	41	14	2	2195	99	5.7	0.5	3.7	0.4	8	14.57	491.82	490.23	2019.26	213.62	2247.45	3.28	5.00
Site pH 8.1	Tank-B	Cladocora caespitosa	38	22.6	0.5	8.0	0.1	2541	445.5	458	63	1934	107	248	41	14	2	2195	99	5.7	0.5	3.7	0.4	8	14.57	491.82	490.23	2019.26	213.62	2247.45	3.28	5.00
Site pH 8.1	Tank-B	Cladocora caespitosa	38	22.6	0.5	8.0	0.1	2541	532.7	458	63	1934	107	248	41	14	2	2195	99	5.7	0.5	3.7	0.4	8	14.57	491.82	490.23	2019.26	213.62	2247.45	3.28	5.00