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Franke, Andrea; Clemmesen, Catriona (2011): Seawater carbonate chemistry, mortality and hatching rate, size and mass of Clupea harengus during experiments, 2011 [dataset]. PANGAEA, https://doi.org/10.1594/PANGAEA.774430, Supplement to: Franke, A; Clemmesen, C (2011): Effect of ocean acidification on early life stages of Atlantic herring (Clupea harengus L.). Biogeosciences, 8(12), 3697-3707, https://doi.org/10.5194/bg-8-3697-2011

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Abstract:
Due to atmospheric accumulation of anthropogenic CO2 the partial pressure of carbon dioxide (pCO2) in surface seawater increases and the pH decreases. This process known as ocean acidification might have severe effects on marine organisms and ecosystems. The present study addresses the effect of ocean acidification on early developmental stages, the most sensitive stages in life history, of the Atlantic herring (Clupea harengus L.). Eggs of the Atlantic herring were fertilized and incubated in artificially acidified seawater (pCO2 1260, 1859, 2626, 2903, 4635 µatm) and a control treatment (pCO2 480 µatm) until the main hatch of herring larvae occurred. The development of the embryos was monitored daily and newly hatched larvae were sampled to analyze their morphometrics, and their condition by measuring the RNA/DNA ratios. Elevated pCO2 neither affected the embryogenesis nor the hatch rate. Furthermore the results showed no linear relationship betweenpCO2 and total length, dry weight, yolk sac area and otolith area of the newly hatched larvae. For pCO2 and RNA/DNA ratio, however, a significant negative linear relationship was found. The RNA concentration at hatching was reduced at higher pCO2 levels, which could lead to a decreased protein biosynthesis. The results indicate that an increased pCO2 can affect the metabolism of herring embryos negatively. Accordingly, further somatic growth of the larvae could be reduced. This can have consequences for the larval fish, since smaller and slow growing individuals have a lower survival potential due to lower feeding success and increased predation mortality. The regulatory mechanisms necessary to compensate for effects of hypercapnia could therefore lead to lower larval survival. Since the recruitment of fish seems to be determined during the early life stages, future research on the factors influencing these stages are of great importance in fisheries science.
Keyword(s):
Animalia; Baltic Sea; Biomass/Abundance/Elemental composition; Bottles or small containers/Aquaria (<20 L); Chordata; Clupea harengus; Coast and continental shelf; Growth/Morphology; Laboratory experiment; Nekton; Pelagos; Reproduction; Single species; Temperate
Funding:
Seventh Framework Programme (FP7), grant/award no. 211384: European Project on Ocean Acidification
Sixth Framework Programme (FP6), grant/award no. 511106: European network of excellence for Ocean Ecosystems Analysis
Comment:
In order to allow full comparability with other ocean acidification data sets, the R package seacarb (Lavigne and Gattuso, 2011) was used to compute a complete and consistent set of carbonate system variables, as described by Nisumaa et al. (2010). In this dataset the original values were archived in addition with the recalculated parameters (see related PI).
Parameter(s):
#NameShort NameUnitPrincipal InvestigatorMethod/DeviceComment
Experimental treatmentExp treatClemmesen, CatrionaStereomicroscopy (Leica)
SalinitySalClemmesen, Catriona
Temperature, waterTemp°CClemmesen, CatrionaConductivity meter (WTW, Weilheim, Gemany)
Temperature, standard deviationT std dev±Clemmesen, Catriona
ReplicatesRepl#Clemmesen, Catriona
pHpHClemmesen, CatrionaConductivity meter (WTW, Weilheim, Gemany)Free scale
pH, standard deviationpH std dev±Clemmesen, Catriona
Alkalinity, totalATµmol/kgClemmesen, CatrionaTitration potentiometric
Alkalinity, total, standard deviationAT std dev±Clemmesen, Catriona
10 Carbon, inorganic, dissolvedDICµmol/kgClemmesen, CatrionaCalculated using CO2SYS
11 Carbon, inorganic, dissolved, standard deviationDIC std dev±Clemmesen, Catriona
12 Partial pressure of carbon dioxide (water) at sea surface temperature (wet air)pCO2water_SST_wetµatmClemmesen, CatrionaCalculated using CO2SYS
13 Carbon dioxide, partial pressure, standard deviationpCO2 std dev±Clemmesen, Catriona
14 Carbon dioxideCO2µmol/kgClemmesen, CatrionaCalculated using CO2SYS
15 Carbon dioxide, standard deviationCO2 std dev±Clemmesen, Catriona
16 Bicarbonate ion[HCO3]-µmol/kgClemmesen, CatrionaCalculated using CO2SYS
17 Bicarbonate ion, standard deviation[HCO3]- std dev±Clemmesen, Catriona
18 Carbonate ion[CO3]2-µmol/kgClemmesen, CatrionaCalculated using CO2SYS
19 Carbonate ion, standard deviation[CO3]2- std dev±Clemmesen, Catriona
20 Aragonite saturation stateOmega ArgClemmesen, CatrionaCalculated using CO2SYS
21 Aragonite saturation state, standard deviationOmega Arg std dev±Clemmesen, Catriona
22 Clupea harengus, eggs, malformedC. harengus eggs%Clemmesen, CatrionaStereomicroscopy (Leica)
23 MortalityMortality%Clemmesen, Catriona
24 Hatching rateHatching%Clemmesen, Catriona
25 Clupea harengus, lengthC. harengus lmmClemmesen, CatrionaMeasured
26 Clupea harengus, dry massC. harengus dmµgClemmesen, CatrionaMicrobalance (Sartorius)
27 Clupea harengus, yolk sac areaC. harengus yolk sac amm2Clemmesen, CatrionaStereomicroscopy (Leica)
28 Clupea harengus, sagitta areaC. harengus sagittaµm2Clemmesen, CatrionaStereomicroscopy (Leica)
29 Clupea harengus, lupillus areaC. harengus lupillusµm2Clemmesen, CatrionaStereomicroscopy (Leica)
30 Ribonucleic acid/Deoxyribonucleic acid ratioRNA/DNAClemmesen, Catriona
31 Carbon, inorganic, dissolvedDICµmol/kgClemmesen, CatrionaCalculated using CO2SYSfrom means
32 Carbonate system computation flagCSC flagNisumaa, Anne-MarinCalculated using seacarb after Nisumaa et al. (2010)
33 pHpHNisumaa, Anne-MarinCalculated using seacarb after Nisumaa et al. (2010)Total scale
34 Carbon dioxideCO2µmol/kgNisumaa, Anne-MarinCalculated using seacarb after Nisumaa et al. (2010)
35 Partial pressure of carbon dioxide (water) at sea surface temperature (wet air)pCO2water_SST_wetµatmNisumaa, Anne-MarinCalculated using seacarb after Nisumaa et al. (2010)
36 Fugacity of carbon dioxide (water) at sea surface temperature (wet air)fCO2water_SST_wetµatmNisumaa, Anne-MarinCalculated using seacarb after Nisumaa et al. (2010)
37 Bicarbonate ion[HCO3]-µmol/kgNisumaa, Anne-MarinCalculated using seacarb after Nisumaa et al. (2010)
38 Carbonate ion[CO3]2-µmol/kgNisumaa, Anne-MarinCalculated using seacarb after Nisumaa et al. (2010)
39 Aragonite saturation stateOmega ArgNisumaa, Anne-MarinCalculated using seacarb after Nisumaa et al. (2010)
40 Calcite saturation stateOmega CalNisumaa, Anne-MarinCalculated using seacarb after Nisumaa et al. (2010)
Status:
Curation Level: Enhanced curation (CurationLevelC)
Size:
951 data points

Data

Download dataset as tab-delimited text — use the following character encoding:


Exp treat
(Stereomicroscopy (Leica))

Sal

Temp [°C]
(Conductivity meter (WTW, Weil...)

T std dev [±]

Repl [#]

pH
(Free scale, Conductivity mete...)

pH std dev [±]

AT [µmol/kg]
(Titration potentiometric)

AT std dev [±]
10 
DIC [µmol/kg]
(Calculated using CO2SYS)
11 
DIC std dev [±]
12 
pCO2water_SST_wet [µatm]
(Calculated using CO2SYS)
13 
pCO2 std dev [±]
14 
CO2 [µmol/kg]
(Calculated using CO2SYS)
15 
CO2 std dev [±]
16 
[HCO3]- [µmol/kg]
(Calculated using CO2SYS)
17 
[HCO3]- std dev [±]
18 
[CO3]2- [µmol/kg]
(Calculated using CO2SYS)
19 
[CO3]2- std dev [±]
20 
Omega Arg
(Calculated using CO2SYS)
21 
Omega Arg std dev [±]
22 
C. harengus eggs [%]
(Stereomicroscopy (Leica))
23 
Mortality [%]
24 
Hatching [%]
25 
C. harengus l [mm]
(Measured)
26 
C. harengus dm [µg]
(Microbalance (Sartorius))
27 
C. harengus yolk sac a [mm2]
(Stereomicroscopy (Leica))
28 
C. harengus sagitta [µm2]
(Stereomicroscopy (Leica))
29 
C. harengus lupillus [µm2]
(Stereomicroscopy (Leica))
30 
RNA/DNA
31 
DIC [µmol/kg]
(from means, Calculated using ...)
32 
CSC flag
(Calculated using seacarb afte...)
33 
pH
(Total scale, Calculated using...)
34 
CO2 [µmol/kg]
(Calculated using seacarb afte...)
35 
pCO2water_SST_wet [µatm]
(Calculated using seacarb afte...)
36 
fCO2water_SST_wet [µatm]
(Calculated using seacarb afte...)
37 
[HCO3]- [µmol/kg]
(Calculated using seacarb afte...)
38 
[CO3]2- [µmol/kg]
(Calculated using seacarb afte...)
39 
Omega Arg
(Calculated using seacarb afte...)
40 
Omega Cal
(Calculated using seacarb afte...)
Control1413.60.418.080.072070.24.11989.920.54808121.53.41887.828.280.611.21.270.1712.014.978.46.042.60.5371.8345.13.81990.8268.0321.02479.33477.591890.7079.081.252.14
Control1413.60.428.080.072070.24.11989.920.54808121.53.41887.828.280.611.21.270.176.57.780.26.040.60.5382.7314.03.21990.8268.0321.02479.33477.591890.7079.081.252.14
Control1413.60.438.080.072070.24.11989.920.54808121.53.41887.828.280.611.21.270.174.25.578.86.145.40.4393.2347.23.11990.8268.0321.02479.33477.591890.7079.081.252.14
Control1413.60.448.080.072070.24.11989.920.54808121.53.41887.828.280.611.21.270.174.88.279.76.238.80.4388.6340.71990.8268.0321.02479.33477.591890.7079.081.252.14
Treatment-11413.60.417.670.071965.84.71981.215.4126021855.78.81894.111.231.54.30.490.0710.712.188.16.343.50.5397.0337.41980.2267.6254.151234.601230.121895.2030.850.490.84
Treatment-11413.60.427.670.071965.84.71981.215.4126021855.78.81894.111.231.54.30.490.074.06.692.26.042.60.4371.3340.91980.2267.6254.151234.601230.121895.2030.850.490.84
Treatment-11413.60.437.670.071965.84.71981.215.4126021855.78.81894.111.231.54.30.490.071.91.995.76.043.10.5408.5363.01980.2267.6254.151234.601230.121895.2030.850.490.84
Treatment-11413.60.447.670.071965.84.71981.215.4126021855.78.81894.111.231.54.30.490.073.66.991.17.044.90.4443.9391.51980.2267.6254.151234.601230.121895.2030.850.490.84
Treatment-21413.60.417.490.051922.65.11977.414.9185924081.69.01874.98.220.91.90.330.036.48.391.76.340.20.4417.0379.32.81977.5267.4481.061848.151841.441876.2420.200.320.55
Treatment-21413.60.427.490.051922.65.11977.414.9185924081.69.01874.98.220.91.90.330.032.82.894.25.942.50.4416.1344.22.91977.5267.4481.061848.151841.441876.2420.200.320.55
Treatment-21413.60.437.490.051922.65.11977.414.9185924081.69.01874.98.220.91.90.330.033.05.587.56.253.90.6428.5373.03.01977.5267.4481.061848.151841.441876.2420.200.320.55
Treatment-21413.60.447.490.051922.65.11977.414.9185924081.69.01874.98.220.91.90.330.0310.612.986.26.548.90.4419.1374.01977.5267.4481.061848.151841.441876.2420.200.320.55
Treatment-31413.60.417.330.031870.24.11967.47.62626197115.46.61837.93.814.10.70.220.015.810.074.76.338.80.5393.6350.92.61967.2267.28114.832618.132608.631838.6813.690.220.37
Treatment-31413.60.427.330.031870.24.11967.47.62626197115.46.61837.93.814.10.70.220.014.56.981.36.547.50.5408.4379.93.01967.2267.28114.832618.132608.631838.6813.690.220.37
Treatment-31413.60.437.330.031870.24.11967.47.62626197115.46.61837.93.814.10.70.220.014.25.992.36.550.20.6433.2392.73.31967.2267.28114.832618.132608.631838.6813.690.220.37
Treatment-31413.60.447.330.031870.24.11967.47.62626197115.46.61837.93.814.10.70.220.012.84.093.56.449.80.5390.5341.81967.2267.28114.832618.132608.631838.6813.690.220.37
Treatment-41413.60.417.280.031854.83.11967.18.02903204128.57.31826.23.012.50.60.200.013.34.881.86.352.50.5427.5378.43.51967.0267.23128.012918.632908.041826.8612.130.190.33
Treatment-41413.60.427.280.031854.83.11967.18.02903204128.57.31826.23.012.50.60.200.019.714.879.36.345.30.6470.5419.02.51967.0267.23128.012918.632908.041826.8612.130.190.33
Treatment-41413.60.437.280.031854.83.11967.18.02903204128.57.31826.23.012.50.60.200.0111.018.366.36.354.30.5409.3371.42.71967.0267.23128.012918.632908.041826.8612.130.190.33
Treatment-41413.60.447.280.031854.83.11967.18.02903204128.57.31826.23.012.50.60.200.013.13.886.26.341.20.4382.5330.01967.0267.23128.012918.632908.041826.8612.130.190.33
Treatment-51413.60.417.050.031737.54.91934.416.64635340206.018.51721.54.06.90.70.110.0138.851.048.26.046.00.6374.8353.62.61933.6267.00204.954672.864655.911721.926.730.110.18
Treatment-51413.60.427.050.031737.54.91934.416.64635340206.018.51721.54.06.90.70.110.015.710.185.26.345.40.4406.1365.92.51933.6267.00204.954672.864655.911721.926.730.110.18
Treatment-51413.60.437.050.031737.54.91934.416.64635340206.018.51721.54.06.90.70.110.011.92.488.46.043.00.5383.3343.82.51933.6267.00204.954672.864655.911721.926.730.110.18
Treatment-51413.60.447.050.031737.54.91934.416.64635340206.018.51721.54.06.90.70.110.017.27.280.26.145.00.5435.1391.21933.6267.00204.954672.864655.911721.926.730.110.18