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Lefebvre, Staphane C; Benner, Ina; Stillman, Jonathon H; Parker, Alexander E; Drake, Michelle K; Rossignol, Pascale E; Okimura, Kristine M; Komada, Tomoko; Carpenter, E J (2012): Seawater carbonate chemistry and carbon allocation, growth and morphology of the coccolithophore Emiliania huxleyi (calcifying strain CCMP 371) during experiments, 2011 [dataset]. PANGAEA, https://doi.org/10.1594/PANGAEA.771910, Supplement to: Lefebvre, Staphane C; Benner, Ina; Stillman, Jonathon H; Parker, Alexander E; Drake, Michelle K; Rossignol, Pascale E; Okimura, Kristine M; Komada, Tomoko; Capenter, Edward J (2012): Nitrogen source and pCO2 synergistically affect carbon allocation, growth and morphology of the coccolithophore Emiliania huxleyi: potential implications of ocean acidification for the carbon cycle. Global Change Biology, 18(2), 493-503, https://doi.org/10.1111/j.1365-2486.2011.02575.x

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Abstract:
Coccolithophores are unicellular phytoplankton that produce calcium carbonate coccoliths as an exoskeleton. Emiliania huxleyi, the most abundant coccolithophore in the world's ocean, plays a major role in the global carbon cycle by regulating the exchange of CO2 across the ocean-atmosphere interface through photosynthesis and calcium carbonate precipitation. As CO2 concentration is rising in the atmosphere, the ocean is acidifying and ammonium (NH4) concentration of future ocean water is expected to rise. The latter is attributed to increasing anthropogenic nitrogen (N) deposition, increasing rates of cyanobacterial N2 fixation due to warmer and more stratified oceans, and decreased rates of nitrification due to ocean acidification. Thus future global climate change will cause oceanic phytoplankton to experience changes in multiple environmental parameters including CO2, pH, temperature and nitrogen source. This study reports on the combined effect of elevated pCO2 and increased NH4 to nitrate (NO3) ratio (NH4/NO3) on E. huxleyi, maintained in continuous cultures for more than 200 generations under two pCO2 levels and two different N sources. Here we show that NH4 assimilation under N-replete conditions depresses calcification at both low and high pCO2, alters coccolith morphology, and increases primary production. We observed that N source and pCO2 synergistically drive growth rates, cell size and the ratio of inorganic to organic carbon. These responses to N source suggest that, compared to increasing CO2 alone, a greater disruption of the organic carbon pump could be expected in response to the combined effect of increased NH4/NO3 ratio and CO2 level in the future acidified ocean. Additional experiments conducted under lower nutrient conditions are needed prior to extrapolating our findings to the global oceans. Nonetheless, our results emphasize the need to assess combined effects of multiple environmental parameters on phytoplankton biology in order to develop accurate predictions of phytoplankton responses to ocean acidification.
Keyword(s):
Biomass/Abundance/Elemental composition; Bottles or small containers/Aquaria (<20 L); Chromista; Emiliania huxleyi; Growth/Morphology; Haptophyta; Laboratory experiment; Laboratory strains; Macro-nutrients; Not applicable; Pelagos; Phytoplankton; Single species
Funding:
Seventh Framework Programme (FP7), grant/award no. 211384: European Project on Ocean Acidification
Sixth Framework Programme (FP6), grant/award no. 511106: European network of excellence for Ocean Ecosystems Analysis
Comment:
In order to allow full comparability with other ocean acidification data sets, the R package seacarb (Lavigne and Gattuso, 2011) was used to compute a complete and consistent set of carbonate system variables, as described by Nisumaa et al. (2010). In this dataset the original values were archived in addition with the recalculated parameters (see related PI).
Parameter(s):
#NameShort NameUnitPrincipal InvestigatorMethod/DeviceComment
Experimental treatmentExp treatLefebvre, Staphane C
SalinitySalLefebvre, Staphane CYSI Multiparameter system
Temperature, waterTemp°CLefebvre, Staphane C
Light:Dark cycleL:Dhh:hhLefebvre, Staphane CMeasured
Radiation, photosynthetically activePARµmol/m2/sLefebvre, Staphane CPAR sensor, biosphericalMin
Radiation, photosynthetically activePARµmol/m2/sLefebvre, Staphane CPAR sensor, biosphericalMax
Carbon, inorganic, dissolvedDICµmol/kgLefebvre, Staphane CMeasured
Carbon, inorganic, dissolved, standard deviationDIC std dev±Lefebvre, Staphane C
Bicarbonate ion[HCO3]-µmol/kgLefebvre, Staphane CCalculated using CO2SYS
10 Bicarbonate ion, standard deviation[HCO3]- std dev±Lefebvre, Staphane C
11 Carbonate ion[CO3]2-µmol/kgLefebvre, Staphane CCalculated using CO2SYS
12 Carbonate ion, standard deviation[CO3]2- std dev±Lefebvre, Staphane C
13 Partial pressure of carbon dioxide (water) at sea surface temperature (wet air)pCO2water_SST_wetµatmLefebvre, Staphane CCalculated using CO2SYS
14 Carbon dioxide, partial pressure, standard deviationpCO2 std dev±Lefebvre, Staphane C
15 Alkalinity, totalATµmol/kgLefebvre, Staphane CAlkalinity, Gran titration (Gran, 1950)
16 Alkalinity, total, standard deviationAT std dev±Lefebvre, Staphane C
17 pHpHLefebvre, Staphane CPotentiometric titration, Metrohm Dosimat 765 (Metrohm, Herisau, Switzerland)Seawater scale
18 pH, standard deviationpH std dev±Lefebvre, Staphane C
19 Calcite saturation stateOmega CalLefebvre, Staphane CCalculated using CO2SYS
20 Calcite saturation state, standard deviationOmega Cal std dev±Lefebvre, Staphane C
21 Time, incubationT incubationdayLefebvre, Staphane C
22 Emiliania huxleyi, generationsE. hux generation#Lefebvre, Staphane C
23 Growth rateµ#/dayLefebvre, Staphane CCalculated, see reference(s)
24 Growth rate, standard deviationµ std dev±Lefebvre, Staphane C
25 Phytoplankton, cell biovolumePP biovolµm3Lefebvre, Staphane CFlow cytometry
26 Phytoplankton, cell biovolume, standard deviationPhytopl biovol std dev±Lefebvre, Staphane C
27 Carbon, organic, particulatePOCfg/µm3Lefebvre, Staphane CElement analyser CHNSO, Costech ECS 4010
28 Carbon, organic, particulate, standard deviationPOC std dev±Lefebvre, Staphane C
29 Carbon, inorganic, particulatePICfg/µm3Lefebvre, Staphane CCalculated
30 Carbon, inorganic, particulate, standard deviationPIC std dev±Lefebvre, Staphane C
31 Nitrogen, organic, particulatePONfg/µm3Lefebvre, Staphane C
32 Nitrogen, organic, particulate, standard deviationPON std dev±Lefebvre, Staphane C
33 Particulate inorganic carbon/particulate organic carbon ratioPIC/POCLefebvre, Staphane C
34 Particulate inorganic carbon/particulate organic carbon ratio, standard deviationPIC/POC ratio std dev±Lefebvre, Staphane C
35 Carbon, organic, particulate/Nitrogen, organic, particulate ratioPOC/PONLefebvre, Staphane CMeasured
36 Carbon, organic, particulate/Nitrogen, organic, particulate ratio, standard deviationPOC/PON std dev±Lefebvre, Staphane C
37 Carbon, total, particulate/Nitrogen, organic, particulate ratioTPC/PONLefebvre, Staphane C
38 Carbon, total, particulate/Nitrogen, organic, particulate ratio, standard deviationTPC/PON std dev±Lefebvre, Staphane C
39 Carbonate system computation flagCSC flagNisumaa, Anne-MarinCalculated using seacarb after Nisumaa et al. (2010)
40 pHpHNisumaa, Anne-MarinCalculated using seacarb after Nisumaa et al. (2010)Total scale
41 Carbon dioxideCO2µmol/kgNisumaa, Anne-MarinCalculated using seacarb after Nisumaa et al. (2010)
42 Partial pressure of carbon dioxide (water) at sea surface temperature (wet air)pCO2water_SST_wetµatmNisumaa, Anne-MarinCalculated using seacarb after Nisumaa et al. (2010)
43 Fugacity of carbon dioxide (water) at sea surface temperature (wet air)fCO2water_SST_wetµatmNisumaa, Anne-MarinCalculated using seacarb after Nisumaa et al. (2010)
44 Bicarbonate ion[HCO3]-µmol/kgNisumaa, Anne-MarinCalculated using seacarb after Nisumaa et al. (2010)
45 Carbonate ion[CO3]2-µmol/kgNisumaa, Anne-MarinCalculated using seacarb after Nisumaa et al. (2010)
46 Aragonite saturation stateOmega ArgNisumaa, Anne-MarinCalculated using seacarb after Nisumaa et al. (2010)
47 Calcite saturation stateOmega CalNisumaa, Anne-MarinCalculated using seacarb after Nisumaa et al. (2010)
Status:
Curation Level: Enhanced curation (CurationLevelC)
Size:
188 data points

Data

Download dataset as tab-delimited text — use the following character encoding:


Exp treat

Sal
(YSI Multiparameter system)

Temp [°C]

L:D [hh:hh]
(Measured)

PAR [µmol/m2/s]
(Min, PAR sensor, biospherical)

PAR [µmol/m2/s]
(Max, PAR sensor, biospherical)

DIC [µmol/kg]
(Measured)

DIC std dev [±]

[HCO3]- [µmol/kg]
(Calculated using CO2SYS)
10 
[HCO3]- std dev [±]
11 
[CO3]2- [µmol/kg]
(Calculated using CO2SYS)
12 
[CO3]2- std dev [±]
13 
pCO2water_SST_wet [µatm]
(Calculated using CO2SYS)
14 
pCO2 std dev [±]
15 
AT [µmol/kg]
(Alkalinity, Gran titration (G...)
16 
AT std dev [±]
17 
pH
(Seawater scale, Potentiometri...)
18 
pH std dev [±]
19 
Omega Cal
(Calculated using CO2SYS)
20 
Omega Cal std dev [±]
21 
T incubation [day]
22 
E. hux generation [#]
23 
µ [#/day]
(Calculated, see reference(s))
24 
µ std dev [±]
25 
PP biovol [µm3]
(Flow cytometry)
26 
Phytopl biovol std dev [±]
27 
POC [fg/µm3]
(Element analyser CHNSO, Coste...)
28 
POC std dev [±]
29 
PIC [fg/µm3]
(Calculated)
30 
PIC std dev [±]
31 
PON [fg/µm3]
32 
PON std dev [±]
33 
PIC/POC
34 
PIC/POC ratio std dev [±]
35 
POC/PON
(Measured)
36 
POC/PON std dev [±]
37 
TPC/PON
38 
TPC/PON std dev [±]
39 
CSC flag
(Calculated using seacarb afte...)
40 
pH
(Total scale, Calculated using...)
41 
CO2 [µmol/kg]
(Calculated using seacarb afte...)
42 
pCO2water_SST_wet [µatm]
(Calculated using seacarb afte...)
43 
fCO2water_SST_wet [µatm]
(Calculated using seacarb afte...)
44 
[HCO3]- [µmol/kg]
(Calculated using seacarb afte...)
45 
[CO3]2- [µmol/kg]
(Calculated using seacarb afte...)
46 
Omega Arg
(Calculated using seacarb afte...)
47 
Omega Cal
(Calculated using seacarb afte...)
Low CO2-NH4+NO3331716:0845050018621415773828520166202278188.350.046.80.51602911.260.0367.01.6250.715.0104.03.630.71.70.420.029.500.113.50.2158.385.52155.27154.731568.12288.364.486.97
Low CO2-NO3331716:0845050018371515747231819472190168.280.015.70.21602140.930.0254.51.7208.73.6171.36.326.60.60.820.029.150.216.60.3158.306.72188.89188.241587.39242.893.775.87
High CO2-NH4+NO3331716:08450500211281914111866367162379118.080.024.50.21552701.210.0255.81.8227.18.792.94.328.71.10.410.019.260.413.00.6158.1212.14341.42340.241906.10193.763.014.69
High CO2-NO3331716:084505001980161769231908308232258118.130.024.60.21552641.180.0266.31.1213.05.9135.35.0264.00.70.640.029.400.115.40.1158.1610.34290.82289.811772.87196.793.064.76