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Ries, Justin B (2011): Seawater carbonate chemistry and hydrogen ions and carbonate chemistry in calcifying fluid of coral Astrangia poculata during experiments, 2011 [dataset]. PANGAEA, https://doi.org/10.1594/PANGAEA.770071, Supplement to: Ries, JB (2011): A physicochemical framework for interpreting the biological calcification response to CO2-induced ocean acidification. Geochimica et Cosmochimica Acta, 75(14), 4053-4064, https://doi.org/10.1016/j.gca.2011.04.025

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Abstract:
A generalized physicochemical model of the response of marine organisms' calcifying fluids to CO2-induced ocean acidification is proposed. The model is based upon the hypothesis that some marine calcifiers induce calcification by elevating pH, and thus Omega aragonite, of their calcifying fluid by removing protons (H+). The model is explored through two end-member scenarios: one in which a fixed number of H+ is removed from their calcifying fluid, regardless of atmospheric pCO2, and another in which a fixed external-internal proton ratio ([H+]E/[H+]I) is maintained. The model is able to generate the full range of calcification response patterns observed in prior ocean acidification experiments and is consistent with the assertion that organisms' calcification response to ocean acidification is more negative for marine calcifiers that exert weaker control over their calcifying fluid pH. The model is empirically evaluated for the temperate scleractinian coral Astrangia poculata with in situ pH microelectrode measurements of the coral's calcifying fluid under control and acidified conditions. These measurements reveal that (1) the pH of the coral's calcifying fluid is substantially elevated relative to its external seawater under both control and acidified conditions, (2) the coral's [H+]E/[H+]I remains constant under control and acidified conditions, and (3) the coral removes fewer H+ from its calcifying fluid under acidified conditions than under control conditions. Thus, the carbonate system dynamics of A. poculata's calcifying fluid appear to be most consistent with the fixed [H+]E/[H+]I end-member scenario. Similar microelectrode experiments performed on additional taxa are required to assess the model's general applicability.
Keyword(s):
Animalia; Astrangia poculata; Benthic animals; Benthos; Bottles or small containers/Aquaria (<20 L); Calcification/Dissolution; Cnidaria; Coast and continental shelf; Laboratory experiment; North Atlantic; Single species; Temperate
Funding:
Seventh Framework Programme (FP7), grant/award no. 211384: European Project on Ocean Acidification
Sixth Framework Programme (FP6), grant/award no. 511106: European network of excellence for Ocean Ecosystems Analysis
Comment:
In order to allow full comparability with other ocean acidification data sets, the R package seacarb (Lavigne and Gattuso, 2011) was used to compute a complete and consistent set of carbonate system variables, as described by Nisumaa et al. (2010). In this dataset the original values were archived in addition with the recalculated parameters (see related PI).
Parameter(s):
#NameShort NameUnitPrincipal InvestigatorMethod/DeviceComment
Experimental treatmentExp treatRies, Justin B
IdentificationIDRies, Justin B
SalinitySalRies, Justin BSalinometer, Guildline Instruments, 8400B Autosal
Temperature, waterTemp°CRies, Justin BPartial-immersion mercury-glass thermometer
pHpHRies, Justin BpH meter (Orion)NBS scale
Alkalinity, totalATµmol/kgRies, Justin BAlkalinity, Gran titration (Gran, 1950)
Carbon, inorganic, dissolvedDICµmol/kgRies, Justin BCalculated using CO2SYS
Carbon, inorganic, dissolvedDICµmol/kgRies, Justin BCalculated using CO2SYSCalculated by Anne-Marin Nisumaa
Partial pressure of carbon dioxide (water) at sea surface temperature (wet air)pCO2water_SST_wetµatmRies, Justin BCalculated using CO2SYS
10 Bicarbonate ion[HCO3]-µmol/kgRies, Justin BCalculated using CO2SYS
11 Carbonate ion[CO3]2-µmol/kgRies, Justin BCalculated using CO2SYS
12 Carbon dioxideCO2µmol/kgRies, Justin BCalculated using CO2SYS
13 Aragonite saturation stateOmega ArgRies, Justin BCalculated using CO2SYS
14 Hydrogen ion concentrationH+µmol/kgRies, Justin B
15 Hydrogen removed from calcifying fluidH+ removedµmol/kgRies, Justin B
16 External seawater hydrogen ion concentration versus calcifying fluid hydrogen ion concentration ratioH+ex/H+iRies, Justin B
17 Astrangia poculata, calcifying fluid, salinityA. poculata CF SRies, Justin BSalinometer, Guildline Instruments, 8400B Autosal
18 Astrangia poculata, calcifying fluid, temperatureA. poculata CF T°CRies, Justin BPartial-immersion mercury-glass thermometer
19 Astrangia poculata, calcifying fluid, pHA. poculata CF pHRies, Justin BpH meter (Orion)NBS scale
20 Astrangia poculata, calcifying fluid, total alkalinityA. poculata CF ATµmol/kgRies, Justin BAlkalinity, Gran titration (Gran, 1950)
21 Astrangia poculata, calcifying fluid, dissolved inorganic carbonA. poculata CF DICµmol/kgRies, Justin BCalculated using CO2SYS
22 Astrangia poculata, calcifying fluid, partial pressure of carbon dioxideA. poculata CF pCO2µatmRies, Justin BCalculated using CO2SYS
23 Astrangia poculata, calcifying fluid, bicarbonate ionA. poculata CF HCO3µmol/kgRies, Justin BCalculated using CO2SYS
24 Astrangia poculata, calcifying fluid, carbonate ionA. poculata CF CO3µmol/kgRies, Justin BCalculated using CO2SYS
25 Astrangia poculata, calcifying fluid, carbon dioxideA. poculata CF CO2µmol/kgRies, Justin BCalculated using CO2SYS
26 Astrangia poculata, calcifying fluid, aragonite saturation stateA. poculata CF omega ArgRies, Justin BCalculated using CO2SYS
27 Astrangia poculata, calcifying fluid, hydrogen ionA. poculata CF H+µmol/kgRies, Justin B
28 Carbonate system computation flagCSC flagNisumaa, Anne-MarinCalculated using seacarb after Nisumaa et al. (2010)
29 pHpHNisumaa, Anne-MarinCalculated using seacarb after Nisumaa et al. (2010)Total scale
30 Carbon dioxideCO2µmol/kgNisumaa, Anne-MarinCalculated using seacarb after Nisumaa et al. (2010)
31 Partial pressure of carbon dioxide (water) at sea surface temperature (wet air)pCO2water_SST_wetµatmNisumaa, Anne-MarinCalculated using seacarb after Nisumaa et al. (2010)
32 Fugacity of carbon dioxide (water) at sea surface temperature (wet air)fCO2water_SST_wetµatmNisumaa, Anne-MarinCalculated using seacarb after Nisumaa et al. (2010)
33 Bicarbonate ion[HCO3]-µmol/kgNisumaa, Anne-MarinCalculated using seacarb after Nisumaa et al. (2010)
34 Carbonate ion[CO3]2-µmol/kgNisumaa, Anne-MarinCalculated using seacarb after Nisumaa et al. (2010)
35 Aragonite saturation stateOmega ArgNisumaa, Anne-MarinCalculated using seacarb after Nisumaa et al. (2010)
36 Calcite saturation stateOmega CalNisumaa, Anne-MarinCalculated using seacarb after Nisumaa et al. (2010)
Status:
Curation Level: Enhanced curation (CurationLevelC)
Size:
216 data points

Data

Download dataset as tab-delimited text — use the following character encoding:


Exp treat

ID

Sal
(Salinometer, Guildline Instru...)

Temp [°C]
(Partial-immersion mercury-gla...)

pH
(NBS scale, pH meter (Orion))

AT [µmol/kg]
(Alkalinity, Gran titration (G...)

DIC [µmol/kg]
(Calculated using CO2SYS)

DIC [µmol/kg]
(Calculated by Anne-Marin Nisu...)

pCO2water_SST_wet [µatm]
(Calculated using CO2SYS)
10 
[HCO3]- [µmol/kg]
(Calculated using CO2SYS)
11 
[CO3]2- [µmol/kg]
(Calculated using CO2SYS)
12 
CO2 [µmol/kg]
(Calculated using CO2SYS)
13 
Omega Arg
(Calculated using CO2SYS)
14 
H+ [µmol/kg]
15 
H+ removed [µmol/kg]
16 
H+ex/H+i
17 
A. poculata CF S
(Salinometer, Guildline Instru...)
18 
A. poculata CF T [°C]
(Partial-immersion mercury-gla...)
19 
A. poculata CF pH
(NBS scale, pH meter (Orion))
20 
A. poculata CF AT [µmol/kg]
(Alkalinity, Gran titration (G...)
21 
A. poculata CF DIC [µmol/kg]
(Calculated using CO2SYS)
22 
A. poculata CF pCO2 [µatm]
(Calculated using CO2SYS)
23 
A. poculata CF HCO3 [µmol/kg]
(Calculated using CO2SYS)
24 
A. poculata CF CO3 [µmol/kg]
(Calculated using CO2SYS)
25 
A. poculata CF CO2 [µmol/kg]
(Calculated using CO2SYS)
26 
A. poculata CF omega Arg
(Calculated using CO2SYS)
27 
A. poculata CF H+ [µmol/kg]
28 
CSC flag
(Calculated using seacarb afte...)
29 
pH
(Total scale, Calculated using...)
30 
CO2 [µmol/kg]
(Calculated using seacarb afte...)
31 
pCO2water_SST_wet [µatm]
(Calculated using seacarb afte...)
32 
fCO2water_SST_wet [µatm]
(Calculated using seacarb afte...)
33 
[HCO3]- [µmol/kg]
(Calculated using seacarb afte...)
34 
[CO3]2- [µmol/kg]
(Calculated using seacarb afte...)
35 
Omega Arg
(Calculated using seacarb afte...)
36 
Omega Cal
(Calculated using seacarb afte...)
Non-acidified seawater (control)Trial 132258.16200117451761.63751552183113.00.0068225390.9322510.12425417453751491596025.80.000075268.0210.91379.49378.291583.48167.212.704.12
Non-acidified seawater (control)Trial 232258.18200117391751.73621542187103.00.00672359103.8322510.19436017393621281611026.00.000064268.0410.32358.89357.761568.01173.372.804.27
Non-acidified seawater (control)Trial 332258.15200117551766.53961567177112.90.0072206268.532259.98406317553962011554025.10.000100268.0111.22390.25389.021591.11164.172.654.05
Acidified seawaterTrial 132257.47173217291732.11943163439560.60.0340160390.432259.433335172919435471182019.10.000370267.3355.411927.461921.391641.3235.370.570.87
Acidified seawaterTrial 232257.48173217261729.51902163240550.60.0330161992.032259.443351172619025321194019.30.000360267.3454.061880.421874.501639.2836.160.580.89
Acidified seawaterTrial 332257.46173217311734.61979163538570.60.0340148774.032259.333219173119796321099017.70.000460267.3256.741973.641967.431643.2434.620.560.85