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Fiorini, Sarah; Pedrotti, Maria Luiza; Middelburg, Jack J; Gattuso, Jean-Pierre; Kerros, Marie-Emmanuelle (2011): Seawater carbonate chemistry, POC, PIC, TPC, SPM, N, TEP and growth rate during experiments with coccolithophores Emiliania huxleyi (AC472), Calcidiscus leptoporus (AC370) and Syracosphaera pulchra (AC418) during experiments, 2011 [dataset]. Laboratoire d'Océanographie de Villefranche, PANGAEA, https://doi.org/10.1594/PANGAEA.770055, Supplement to: Fiorini, Sarah; Middelburg, Jack J; Gattuso, Jean-Pierre (2011): Effects of elevated CO2 partial pressure and temperature on the coccolithophore Syracosphaera pulchra. Aquatic Microbial Ecology, 64(3), 221-232, https://doi.org/10.3354/ame01520

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Abstract:
The response of three coccolithophores (Emiliania huxleyi, Calcidiscus leptoporus and Syracosphaera pulchra) to elevated partial pressure (pCO2) of carbon dioxide was investigated in batch cultures. For the first time, we also report on the response of the non calcifying (haploid) life stage of these three species. The growth rate, cell size, inorganic (PIC) and organic carbon (POC) of both life stages were measured at two different pCO2 (400and 760 ppm) and their organic and inorganic carbon production calculated. The two lifestages within the same species generally exhibited a similar response to elevated pCO2, theresponse of the haploid stage being often more pronounced than that of the diploid stage. Thegrowth rate was consistently higher at higher pCO2 but the response of other processes varied among species. The calcification rate of C. leptoporus and of S. pulchra did not change at elevated pCO2 while increased in E. huxleyi. The POC production as well as the cell size of both life stages of S. pulchra and of the haploid stage of E. huxleyi markedly decreased at elevated pCO2. It remained unaltered in the diploid stage of E. huxleyi and C. leptoporus and increased in the haploid stage of the latter. The PIC:POC ratio increased in E. huxleyi and was constant in C. leptoporus and S. pulchra. These results suggest that the non-calcifying stage, is more responsive than the calcifying stage and that the most versatile genera will proliferate in a more acidic ocean rather than all coccolithophores will decline.
Keyword(s):
Biomass/Abundance/Elemental composition; Bottles or small containers/Aquaria (<20 L); Calcidiscus leptoporus; Calcification/Dissolution; Chromista; Emiliania huxleyi; Growth/Morphology; Haptophyta; Laboratory experiment; Laboratory strains; Mediterranean Sea; Pelagos; Phytoplankton; Primary production/Photosynthesis; Single species; Syracosphaera pulchra; Temperature
Funding:
Seventh Framework Programme (FP7), grant/award no. 211384: European Project on Ocean Acidification
Sixth Framework Programme (FP6), grant/award no. 511106: European network of excellence for Ocean Ecosystems Analysis
Comment:
In order to allow full comparability with other ocean acidification data sets, the R package seacarb (Lavigne and Gattuso, 2011) was used to compute a complete and consistent set of carbonate system variables, as described by Nisumaa et al. (2010). In this dataset the original values were archived in addition with the recalculated parameters (see related PI).
Parameter(s):
#NameShort NameUnitPrincipal InvestigatorMethod/DeviceComment
SpeciesSpeciesFiorini, Sarah
Sample IDSample IDFiorini, Sarah
Experimental treatmentExp treatFiorini, Sarah
SalinitySalFiorini, Sarah
Temperature, waterTemp°CFiorini, Sarah
Radiation, photosynthetically activePARµmol/m2/sFiorini, Sarah
Light:Dark cycleL:Dhh:hhFiorini, SarahMeasured
Calcite saturation stateOmega CalFiorini, SarahCalculated using seacarb
Emiliania huxleyiE. huxleyi#/lFiorini, SarahCoulter Counter (Beckman Coulter)
10 Calcidiscus leptoporusC. leptoporus#/lFiorini, SarahCoulter Counter (Beckman Coulter)
11 Syracosphaera pulchraS. pulchra#/lFiorini, SarahCoulter Counter (Beckman Coulter)
12 Growth rateµ#/dayFiorini, SarahCalculated, see reference(s)
13 Carbon, inorganic, dissolvedDICµmol/kgFiorini, SarahCalculated using seacarbT0
14 Carbon, inorganic, dissolvedDICµmol/kgFiorini, SarahCalculated using seacarbTfin
15 Carbon, inorganic, dissolvedDICµmol/kgFiorini, SarahCalculatedaverage
16 Alkalinity, totalATµmol/kgFiorini, SarahAlkalinity, Gran titration (Gran, 1950)T0
17 Alkalinity, totalATµmol/kgFiorini, SarahAlkalinity, Gran titration (Gran, 1950)Tfin
18 Alkalinity, totalATµmol/kgFiorini, SarahCalculatedaverage
19 Carbon dioxideCO2µmol/kgFiorini, SarahCalculated using seacarbT0
20 Carbon dioxideCO2µmol/kgFiorini, SarahCalculated using seacarbTfin
21 pHpHFiorini, SarahpH meter (Metrohm electrodes)T0; Total scale
22 pHpHFiorini, SarahpH meter (Metrohm electrodes)Tfin; Total scale
23 Partial pressure of carbon dioxide (water) at sea surface temperature (wet air)pCO2water_SST_wetµatmFiorini, SarahCalculated using seacarbT0
24 Partial pressure of carbon dioxide (water) at sea surface temperature (wet air)pCO2water_SST_wetµatmFiorini, SarahCalculated using seacarbTfin
25 Carbonate ion[CO3]2-µmol/kgFiorini, SarahCalculated using seacarbT0
26 Carbonate ion[CO3]2-µmol/kgFiorini, SarahCalculated using seacarbTfin
27 Suspended particulate matterSPMmg/lFiorini, Sarah
28 Total particulate carbon production per cellTPC prod/cellpmol/#/dayFiorini, SarahMass spectrometer Thermo Electron Flash EA 1122 Analyzer
29 Carbon, total, particulateTPCµg/lFiorini, SarahMass spectrometer Thermo Electron Flash EA 1122 Analyzer
30 Total particulate carbon per cellTPC/cellpg/#Fiorini, SarahMass spectrometer Thermo Electron Flash EA 1122 Analyzer
31 Carbon, organic, particulatePOC%Fiorini, SarahMass spectrometer Thermo Electron Flash EA 1122 Analyzer
32 Carbon, organic, particulatePOCµg/lFiorini, SarahMass spectrometer Thermo Electron Flash EA 1122 Analyzer
33 Carbon, organic, particulate, per cellPOC/cellpg/#Fiorini, SarahMass spectrometer Thermo Electron Flash EA 1122 Analyzer
34 Carbon, inorganic, particulate, per cellPIC/cellpg/#Fiorini, SarahCalculated
35 Nitrogen, totalTN%Fiorini, SarahSkalar AutoAnalyser
36 NitrogenNµg/lFiorini, SarahSkalar AutoAnalyser
37 Nitrogen per cellN/cellpg/#Fiorini, SarahSkalar AutoAnalyserUnit was N/# before, not sure if pg/# is correct, please be careful!
38 Carbonate system computation flagCSC flagNisumaa, Anne-MarinCalculated using seacarb after Nisumaa et al. (2010)
39 pHpHNisumaa, Anne-MarinCalculated using seacarb after Nisumaa et al. (2010)Total scale
40 Carbon dioxideCO2µmol/kgNisumaa, Anne-MarinCalculated using seacarb after Nisumaa et al. (2010)
41 Partial pressure of carbon dioxide (water) at sea surface temperature (wet air)pCO2water_SST_wetµatmNisumaa, Anne-MarinCalculated using seacarb after Nisumaa et al. (2010)
42 Fugacity of carbon dioxide (water) at sea surface temperature (wet air)fCO2water_SST_wetµatmNisumaa, Anne-MarinCalculated using seacarb after Nisumaa et al. (2010)
43 Bicarbonate ion[HCO3]-µmol/kgNisumaa, Anne-MarinCalculated using seacarb after Nisumaa et al. (2010)
44 Carbonate ion[CO3]2-µmol/kgNisumaa, Anne-MarinCalculated using seacarb after Nisumaa et al. (2010)
45 Aragonite saturation stateOmega ArgNisumaa, Anne-MarinCalculated using seacarb after Nisumaa et al. (2010)
46 Calcite saturation stateOmega CalNisumaa, Anne-MarinCalculated using seacarb after Nisumaa et al. (2010)
47 Transparent exopolymer particlesTEPmlPedrotti, Maria Luiza
48 Transparent exopolymer particlesTEPµg C/lPedrotti, Maria Luiza
49 Transparent exopolymer particles per cellTEP/cellpg/#Pedrotti, Maria Luiza
Status:
Curation Level: Enhanced curation (CurationLevelC)
Size:
1536 data points

Data

Download dataset as tab-delimited text — use the following character encoding:


Species

Sample ID

Exp treat

Sal

Temp [°C]

PAR [µmol/m2/s]

L:D [hh:hh]
(Measured)

Omega Cal
(Calculated using seacarb)

E. huxleyi [#/l]
(Coulter Counter (Beckman Coul...)
10 
C. leptoporus [#/l]
(Coulter Counter (Beckman Coul...)
11 
S. pulchra [#/l]
(Coulter Counter (Beckman Coul...)
12 
µ [#/day]
(Calculated, see reference(s))
13 
DIC [µmol/kg]
(T0, Calculated using seacarb)
14 
DIC [µmol/kg]
(Tfin, Calculated using seacarb)
15 
DIC [µmol/kg]
(average, Calculated)
16 
AT [µmol/kg]
(T0, Alkalinity, Gran titratio...)
17 
AT [µmol/kg]
(Tfin, Alkalinity, Gran titrat...)
18 
AT [µmol/kg]
(average, Calculated)
19 
CO2 [µmol/kg]
(T0, Calculated using seacarb)
20 
CO2 [µmol/kg]
(Tfin, Calculated using seacarb)
21 
pH
(T0; Total scale, pH meter (Me...)
22 
pH
(Tfin; Total scale, pH meter (...)
23 
pCO2water_SST_wet [µatm]
(T0, Calculated using seacarb)
24 
pCO2water_SST_wet [µatm]
(Tfin, Calculated using seacarb)
25 
[CO3]2- [µmol/kg]
(T0, Calculated using seacarb)
26 
[CO3]2- [µmol/kg]
(Tfin, Calculated using seacarb)
27 
SPM [mg/l]
28 
TPC prod/cell [pmol/#/day]
(Mass spectrometer Thermo Elec...)
29 
TPC [µg/l]
(Mass spectrometer Thermo Elec...)
30 
TPC/cell [pg/#]
(Mass spectrometer Thermo Elec...)
31 
POC [%]
(Mass spectrometer Thermo Elec...)
32 
POC [µg/l]
(Mass spectrometer Thermo Elec...)
33 
POC/cell [pg/#]
(Mass spectrometer Thermo Elec...)
34 
PIC/cell [pg/#]
(Calculated)
35 
TN [%]
(Skalar AutoAnalyser)
36 
N [µg/l]
(Skalar AutoAnalyser)
37 
N/cell [pg/#]
(Unit was N/# before, not sure...)
38 
CSC flag
(Calculated using seacarb afte...)
39 
pH
(Total scale, Calculated using...)
40 
CO2 [µmol/kg]
(Calculated using seacarb afte...)
41 
pCO2water_SST_wet [µatm]
(Calculated using seacarb afte...)
42 
fCO2water_SST_wet [µatm]
(Calculated using seacarb afte...)
43 
[HCO3]- [µmol/kg]
(Calculated using seacarb afte...)
44 
[CO3]2- [µmol/kg]
(Calculated using seacarb afte...)
45 
Omega Arg
(Calculated using seacarb afte...)
46 
Omega Cal
(Calculated using seacarb afte...)
47 
TEP [ml]
48 
TEP [µg C/l]
49 
TEP/cell [pg/#]
Emiliania huxleyidiploid ApCO2=40033.61916012:124.4459470000.9361984.281989.071982.672230.72250.02236.113.412.58.048.07403378181.0177.016.007.061.1324.664.54728.9715.878.790.741192.60158.0811.97357.76356.541790.23180.472.824.35168758.81.28
Emiliania huxleyidiploid BpCO2=40033.61916012:12516840000.9571986.202248.78.0737518.906.671.2524.174.26798.6615.458.710.701312.54169862.61.21
Emiliania huxleyidiploid CpCO2=40033.61916012:12471700000.9521967.912226.08.0637619.505.991.1624.653.96768.0716.288.370.671292.74247771.21.51
Emiliania huxleyihaploid ApCO2=40033.61916012:124.4335330000.9291984.282030.091995.542230.72332.02269.213.410.88.048.13403332181.0204.019.704.190.8324.714.18824.3024.580.701374.09158.1111.10331.75330.631789.89194.543.044.69106910.80.32
Emiliania huxleyihaploid BpCO2=40033.61916012:12379980000.9202008.012310.08.1332516.504.880.8021.054.79785.8020.680.801313.46154215.60.41
Emiliania huxleyihaploid CpCO2=40033.61916012:12397420000.9231982.322281.38.1332418.604.420.8220.634.37811.4120.420.761413.56107910.90.27
Emiliania huxleyidiploid ApCO2=76033.61916012:122.7329350001.0012100.502073.572086.602223.82216.02218.925.824.37.807.81774745113.0107.020.704.060.8425.372.40494.4015.0110.360.40832.51157.8124.26725.01722.561956.03106.311.662.56372117.00.52
Emiliania huxleyidiploid BpCO2=76033.61916012:12311440000.9792072.732213.37.8074822.503.600.8125.982.20493.5615.8510.130.43963.07362218.00.58
Emiliania huxleyidiploid CpCO2=76033.61916012:12355180000.9742071.782213.07.8174221.903.930.8624.202.23488.2313.7510.450.44962.69392111.40.32
Emiliania huxleyihaploid ApCO2=76033.61916012:122.7257820000.9432100.502107.152099.212223.82274.02243.025.821.87.807.86774664113.0121.020.002.100.4216.302.08415.0316.100.41833.20157.8422.88683.72681.401962.81113.521.772.7411043.20.13
Emiliania huxleyihaploid BpCO2=76033.61916012:12239520000.9372104.692268.57.8567420.402.040.4217.402.00408.5817.060.41843.5021496.30.26
Emiliania huxleyihaploid CpCO2=76033.61916012:12235570000.9352081.902244.07.8566520.402.160.4418.502.14435.5018.490.45913.8572009.80.42
Calcidiscus leptoporusdiploid ApCO2=40033.61916012:124.557050000.3411966.591887.961929.822221.02078.72151.112.816.18.057.94390486186.0129.021.494.580.98171.411.94412.3972.2899.120.408514.93158.0313.25395.94394.601759.12157.452.463.80114386.015.08
Calcidiscus leptoporusdiploid BpCO2=40033.61916012:1247080000.3321888.772074.07.9349819.125.271.00213.402.07395.4383.99129.410.417916.771375109.723.30
Calcidiscus leptoporusdiploid CpCO2=40033.61916012:1247690000.3171902.462091.07.9449222.264.320.96201.731.93429.6190.08111.650.378117.08116398.420.62
Calcidiscus leptoporushaploid ApCO2=40033.61916012:124.599870000.5311966.591942.451951.712221.02206.32210.112.811.98.058.08390355186.0177.017.513.810.6766.923.73654.2865.510.45787.84158.0911.40340.70339.551757.64182.672.854.41114371.87.19
Calcidiscus leptoporushaploid BpCO2=40033.61916012:1287520000.5491935.762192.38.0736815.672.360.3742.962.36369.6142.230.42657.44137559.16.76
Calcidiscus leptoporushaploid CpCO2=40033.61916012:1290640000.5381932.282198.78.0835615.772.530.3943.832.52394.5343.530.42677.35116391.310.07
Calcidiscus leptoporusdiploid ApCO2=76033.61916012:122.960640000.4162133.072152.972135.782278.02265.02263.525.530.97.807.71772962119.091.021.204.941.05172.902.33492.9181.2891.620.5110817.74157.8025.83771.83769.222005.02104.931.642.53232575.512.46
Calcidiscus leptoporusdiploid BpCO2=76033.61916012:1262600000.4282124.002233.07.7196220.675.481.13180.912.45507.4281.0699.850.5210817.22504868.610.96
Calcidiscus leptoporushaploid ApCO2=76033.61916012:122.962500000.6342133.072201.162173.342278.02373.72334.225.522.67.807.86772700119.0131.05.676.110.3555.526.09344.5755.341.02589.24157.8721.92655.08652.862025.28126.141.973.04285231.75.10
Calcidiscus leptoporushaploid BpCO2=76033.61916012:1260120000.6242204.892386.77.876756.305.720.3659.945.75358.5459.790.91579.44111254.19.01
Calcidiscus leptoporushaploid CpCO2=76033.61916012:1256330000.6272234.802411.07.867086.635.410.3662.755.40355.5562.690.895910.3283343.97.80
Syracosphaera pulchradiploid ApCO2=40033.61916012:1265540000.6261980.071924.591956.652222.32202.32215.913.811.48.038.10416339178.0183.019.135.821.11169.624.70897.35136.9232.710.7213821.07158.0911.41340.81339.651761.78183.472.864.43103116.22.46
Syracosphaera pulchradiploid BpCO2=40033.61916012:1252020000.5971941.152213.08.0835421.674.941.07205.093.92841.07161.6843.410.5812423.9183812.02.31
Syracosphaera pulchradiploid CpCO2=40033.61916012:1268010000.6391933.952213.38.1033820.194.991.00147.004.52905.67133.1713.830.6913720.2199235.05.15
Syracosphaera pulchrahaploid ApCO2=40033.61916012:124.339690000.5311980.071963.891968.252222.32244.82229.613.811.38.038.10416344178.0188.022.563.570.80202.093.55801.96202.050.5312030.27158.1011.42341.26340.101771.56185.272.894.4755918.34.60
Syracosphaera pulchrahaploid BpCO2=40033.61916012:1239640000.5271956.922236.78.1034217.764.580.80202.864.53797.92201.290.990.6812030.3562816.84.24
Syracosphaera pulchrahaploid CpCO2=40033.61916012:1238700000.5311948.502229.38.1033822.623.460.78202.203.46782.03202.070.120.5111630.0344322.05.68
Syracosphaera pulchradiploid ApCO2=76033.61916012:122.973770000.6472087.522046.412072.212235.02222.72232.624.120.17.827.89730601119.0125.019.064.990.93125.824.15778.70105.5620.260.7714519.63157.8820.40609.66607.591928.87122.941.922.97180520.92.83
Syracosphaera pulchradiploid BpCO2=76033.61916012:1277170000.6582064.512234.77.8763222.254.270.95122.473.38750.5297.2625.210.6514318.56197915.82.04
Syracosphaera pulchradiploid CpCO2=76033.61916012:1278700000.6602059.762233.07.8862222.783.940.90114.093.22732.8993.1220.970.6013617.31104513.91.76
Syracosphaera pulchrahaploid ApCO2=76033.61916012:122.9106990000.6312087.522012.642058.522235.02252.32247.324.115.47.828.02730428119.0158.020.355.221.0395.955.161015.0594.870.720.9017716.57157.9517.34518.24516.491900.74140.442.193.3947511.61.08
Syracosphaera pulchrahaploid BpCO2=76033.61916012:1292130000.5802039.762260.37.9848218.984.790.9198.704.77905.2998.260.460.8516117.514614.60.49
Syracosphaera pulchrahaploid CpCO2=76033.61916012:12104090000.6142036.142266.08.0046019.495.110.9894.455.10980.0394.150.610.8917216.505029.70.93
Syracosphaera pulchradiploid ApCO2=40033.62216012:124.842580000.6231933.781909.761923.622205.02197.72200.611.811.28.068.07379356198.0189.017.194.260.73172.053.60619.07145.3926.660.579822.95158.0810.69346.81345.681717.54195.393.084.73
Syracosphaera pulchradiploid BpCO2=40033.62216012:1253930000.6631916.182200.08.0835424.843.320.82152.662.78691.32128.1924.470.4310719.90
Syracosphaera pulchradiploid CpCO2=40033.62216012:1237270000.6011914.452191.08.0636821.613.170.68182.232.79602.59161.6820.550.459525.61
Syracosphaera pulchrahaploid ApCO2=40033.62216012:124.8144420000.6231933.781776.181861.072205.02197.02201.811.86.28.058.29379188198.0270.030.965.701.71118.075.681702.14117.860.210.7422115.29158.197.83253.98253.151616.81236.433.735.73
Syracosphaera pulchrahaploid BpCO2=40033.62216012:12162480000.6311788.802198.88.2620036.934.661.71127.584.501653.10126.680.190.6323114.22
Syracosphaera pulchrahaploid CpCO2=40033.62216012:12105980000.5961800.082200.08.2521236.763.911.44135.603.901435.52135.450.150.5420018.91
Syracosphaera pulchradiploid ApCO2=75033.62216012:123.255490000.5942077.922063.292071.992222.02237.32233.622.520.37.807.85751677133.0130.024.464.000.98176.193.34817.92147.4028.790.4811821.33157.8421.03682.17679.941926.05124.921.973.03
Syracosphaera pulchradiploid BpCO2=75033.62216012:1263860000.5952051.722232.37.8665819.214.820.91142.874.33821.69128.6714.200.6011417.84
Syracosphaera pulchradiploid CpCO2=75033.62216012:1259740000.5982083.182266.07.8666119.394.870.94157.594.26824.27137.9819.620.6011619.41
Syracosphaera pulchrahaploid ApCO2=75033.62216012:123.189570000.5862063.621998.052035.202234.02244.62241.222.714.17.818.00745449129.0169.025.344.151.05116.514.091036.41115.710.5814716.37157.9416.23526.45524.731866.90152.082.403.68
Syracosphaera pulchrahaploid BpCO2=75033.62216012:12103190000.5972006.362248.57.9846220.645.251.09109.255.061041.94108.600.7415214.74
Syracosphaera pulchrahaploid CpCO2=75033.62216012:1294910000.5902015.912252.37.9947124.114.000.96101.544.00963.25101.490.5914214.96