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Hoppe, Clara Jule Marie; Langer, Gerald; Rost, Björn (2011): Seawater carbonate chemistry and biological processes of Emiliania huxleyi (strains RCC1256 and NZEH) during experiments, 2011 [dataset]. PANGAEA, https://doi.org/10.1594/PANGAEA.763842, Supplement to: Hoppe, CJM et al. (2011): Emiliania huxleyi shows identical responses to elevated pCO2 in TA and DIC manipulations. Journal of Experimental Marine Biology and Ecology, 406(1-2), 54-62, https://doi.org/10.1016/j.jembe.2011.06.008

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Abstract:
With respect to their sensitivity to ocean acidification, calcifiers such as the coccolithophore Emiliania huxleyi have received special attention, as the process of calcification seems to be particularly sensitive to changes in the marine carbonate system. For E. huxleyi, apparently conflicting results regarding its sensitivity to ocean acidification have been published (Iglesias-Rodriguez et al., 2008a; Riebesell et al., 2000). As possible causes for discrepancies, intra-specific variability and different effects of CO2 manipulation methods, i.e. the manipulation of total alkalinity (TA) or total dissolved inorganic carbon (DIC), have been discussed. While Langer et al. (2009) demonstrate a high degree of intra-specific variability between strains of E. huxleyi, the question whether different CO2 manipulation methods influence the cellular responses has not been resolved yet. In this study, closed TA as well as open and closed DIC manipulation methods were compared with respect to E. huxleyi's CO2-dependence in growth rate, POC- and PIC-production. The differences in the carbonate chemistry between TA and DIC manipulations were shown not to cause any differences in response patterns, while the latter differed between open and closed DIC manipulation. The two strains investigated showed different sensitivities to acidification of seawater, RCC1256 being more negatively affected in growth rates and PIC production than NZEH.
Keyword(s):
Bottles or small containers/Aquaria (<20 L); Calcification/Dissolution; Chromista; Emiliania huxleyi; Growth/Morphology; Haptophyta; Laboratory experiment; Laboratory strains; Pelagos; Phytoplankton; Primary production/Photosynthesis; Single species; South Pacific
Funding:
Seventh Framework Programme (FP7), grant/award no. 211384: European Project on Ocean Acidification
Seventh Framework Programme (FP7), grant/award no. 265103: Mediterranean Sea Acidification in a Changing Climate
Sixth Framework Programme (FP6), grant/award no. 511106: European network of excellence for Ocean Ecosystems Analysis
Comment:
In order to allow full comparability with other ocean acidification data sets, the R package seacarb (Lavigne and Gattuso, 2011) was used to compute a complete and consistent set of carbonate system variables, as described by Nisumaa et al. (2010). In this dataset the original values were archived in addition with the recalculated parameters (see related PI).
Parameter(s):
#NameShort NameUnitPrincipal InvestigatorMethod/DeviceComment
SpeciesSpeciesHoppe, Clara Jule Marie
Experimental treatmentExp treatHoppe, Clara Jule Marie
CommentCommentHoppe, Clara Jule Marie
Sample IDSample IDHoppe, Clara Jule Marie
SalinitySalHoppe, Clara Jule Marie
Temperature, waterTemp°CHoppe, Clara Jule Marie
Alkalinity, totalATµmol/kgHoppe, Clara Jule MarieAlkalinity, Gran titration (Gran, 1950)
Carbon, inorganic, dissolvedDICµmol/kgHoppe, Clara Jule MarieSeal QuAAtro SFA Analyzer, Seal Analytical, 800 TM
pHpHHoppe, Clara Jule MarieCalculated using CO2SYSNBS scale
10 Partial pressure of carbon dioxide (water) at sea surface temperature (wet air)pCO2water_SST_wetµatmHoppe, Clara Jule MarieCalculated using CO2SYS
11 Bicarbonate ion[HCO3]-µmol/kgHoppe, Clara Jule MarieCalculated using CO2SYS
12 Carbonate ion[CO3]2-µmol/kgHoppe, Clara Jule MarieCalculated using CO2SYS
13 Carbon dioxideCO2µmol/kgHoppe, Clara Jule MarieCalculated using CO2SYS
14 Calcite saturation stateOmega CalHoppe, Clara Jule MarieCalculated using CO2SYS
15 Growth rateµ#/dayHoppe, Clara Jule MarieCalculated
16 Carbon, organic, particulate, per cellPOC/cellpg/#Hoppe, Clara Jule MarieMass spectrometer ANCA-SL 20-20 Europa Scientific
17 Particulate organic carbon production per cellPOC prod/cellpg/#/dayHoppe, Clara Jule MarieCalculated
18 Carbon, inorganic, particulate, per cellPIC/cellpg/#Hoppe, Clara Jule MarieCalculated
19 Particulate inorganic carbon production per cellPIC prod/cellpg/#/dayHoppe, Clara Jule MarieCalculated
20 Particulate inorganic carbon/particulate organic carbon ratioPIC/POCHoppe, Clara Jule MarieCalculated
21 Carbonate system computation flagCSC flagNisumaa, Anne-MarinCalculated using seacarb after Nisumaa et al. (2010)
22 pHpHNisumaa, Anne-MarinCalculated using seacarb after Nisumaa et al. (2010)Total scale
23 Carbon dioxideCO2µmol/kgNisumaa, Anne-MarinCalculated using seacarb after Nisumaa et al. (2010)
24 Partial pressure of carbon dioxide (water) at sea surface temperature (wet air)pCO2water_SST_wetµatmNisumaa, Anne-MarinCalculated using seacarb after Nisumaa et al. (2010)
25 Fugacity of carbon dioxide (water) at sea surface temperature (wet air)fCO2water_SST_wetµatmNisumaa, Anne-MarinCalculated using seacarb after Nisumaa et al. (2010)
26 Bicarbonate ion[HCO3]-µmol/kgNisumaa, Anne-MarinCalculated using seacarb after Nisumaa et al. (2010)
27 Carbonate ion[CO3]2-µmol/kgNisumaa, Anne-MarinCalculated using seacarb after Nisumaa et al. (2010)
28 Aragonite saturation stateOmega ArgNisumaa, Anne-MarinCalculated using seacarb after Nisumaa et al. (2010)
29 Calcite saturation stateOmega CalNisumaa, Anne-MarinCalculated using seacarb after Nisumaa et al. (2010)
Status:
Curation Level: Enhanced curation (CurationLevelC)
Size:
1638 data points

Data

Download dataset as tab-delimited text — use the following character encoding:


Species

Exp treat

Comment

Sample ID

Sal

Temp [°C]

AT [µmol/kg]
(Alkalinity, Gran titration (G...)

DIC [µmol/kg]
(Seal QuAAtro SFA Analyzer, Se...)

pH
(NBS scale, Calculated using C...)
10 
pCO2water_SST_wet [µatm]
(Calculated using CO2SYS)
11 
[HCO3]- [µmol/kg]
(Calculated using CO2SYS)
12 
[CO3]2- [µmol/kg]
(Calculated using CO2SYS)
13 
CO2 [µmol/kg]
(Calculated using CO2SYS)
14 
Omega Cal
(Calculated using CO2SYS)
15 
µ [#/day]
(Calculated)
16 
POC/cell [pg/#]
(Mass spectrometer ANCA-SL 20-...)
17 
POC prod/cell [pg/#/day]
(Calculated)
18 
PIC/cell [pg/#]
(Calculated)
19 
PIC prod/cell [pg/#/day]
(Calculated)
20 
PIC/POC
(Calculated)
21 
CSC flag
(Calculated using seacarb afte...)
22 
pH
(Total scale, Calculated using...)
23 
CO2 [µmol/kg]
(Calculated using seacarb afte...)
24 
pCO2water_SST_wet [µatm]
(Calculated using seacarb afte...)
25 
fCO2water_SST_wet [µatm]
(Calculated using seacarb afte...)
26 
[HCO3]- [µmol/kg]
(Calculated using seacarb afte...)
27 
[CO3]2- [µmol/kg]
(Calculated using seacarb afte...)
28 
Omega Arg
(Calculated using seacarb afte...)
29 
Omega Cal
(Calculated using seacarb afte...)
Emiliania huxleyi (RCC1256)pCO2=180TA manipulation closed13215260321258.293101903.22210.1511.765.111.18158.455.61147.76147.241772.66346.735.388.42
Emiliania huxleyi (RCC1256)pCO2=180TA manipulation closed23215245321068.322851873.59221.6710.805.391.2310.2212.529.4211.540.92158.298.45222.54221.751847.49250.063.886.08
Emiliania huxleyi (RCC1256)pCO2=180TA manipulation closed33215246921118.342711869.09231.5610.295.631.1610.4912.2110.9612.751.04158.318.16214.93214.171844.70258.144.006.27
Emiliania huxleyi (RCC1256)pCO2=380TA manipulation closed13215232021087.917761986.6491.4529.442.221.14158.0714.82390.37388.981936.55156.632.433.81
Emiliania huxleyi (RCC1256)pCO2=380TA manipulation closed23215228520918.006211956.54110.8023.572.691.1812.6014.888.7110.290.69158.0315.99421.22419.721930.72144.292.243.51
Emiliania huxleyi (RCC1256)pCO2=380TA manipulation closed33215229220938.006221958.83110.9323.592.701.2012.1814.639.0110.820.74158.0415.61411.32409.851929.77147.622.293.59
Emiliania huxleyi (RCC1256)pCO2=750TA manipulation closed13215218920697.829421960.3273.3435.741.781.0811.5512.51157.8624.06633.77631.511947.3897.561.512.37
Emiliania huxleyi (RCC1256)pCO2=750TA manipulation closed23215217620657.829401956.1573.1935.661.781.0711.8412.656.727.190.57157.8425.45670.43668.041947.3392.221.432.24
Emiliania huxleyi (RCC1256)pCO2=750TA manipulation closed33215215420557.819571947.6871.2136.341.731.1510.4912.096.72157.8027.42722.43719.861942.4385.151.322.07
Emiliania huxleyi (RCC1256)pCO2=1000TA manipulation closed13215216220877.7311721982.7260.3044.471.471.0713.5414.476.697.150.49157.7333.26876.25873.131980.7473.001.131.77
Emiliania huxleyi (RCC1256)pCO2=1000TA manipulation closed23215216720847.7112251980.0657.5146.501.401.0712.0012.807.467.960.62157.7531.31824.87821.931975.5577.141.201.87
Emiliania huxleyi (RCC1256)pCO2=1000TA manipulation closed33215215220757.7112201971.7057.2646.311.391.0413.6714.197.387.660.54157.7332.53856.95853.891968.7373.741.141.79
Emiliania huxleyi (RCC1256)pCO2=180DIC manipulation closed13215235719528.441941682.35262.407.366.381.1614.4816.859.9211.540.69158.405.97157.36156.801660.39285.644.436.94
Emiliania huxleyi (RCC1256)pCO2=180DIC manipulation closed23215234319328.441921665.08259.707.286.311.1612.5814.5610.3511.980.82158.415.74151.16150.621637.16289.104.487.02
Emiliania huxleyi (RCC1256)pCO2=180DIC manipulation closed33215234819358.451871662.12265.287.106.451.1812.5914.8110.5012.340.83158.415.72150.61150.071638.61290.684.517.06
Emiliania huxleyi (RCC1256)pCO2=380DIC manipulation closed13215235220638.213671876.75172.3613.944.191.1411.9513.659.5710.920.80158.2110.15267.39266.441845.24207.613.225.04
Emiliania huxleyi (RCC1256)pCO2=380DIC manipulation closed23215233620578.203751874.24168.2214.244.091.1912.3014.669.6511.500.78158.2010.52277.14276.151846.00200.483.114.87
Emiliania huxleyi (RCC1256)pCO2=380DIC manipulation closed33215234320548.183941877.86160.9614.943.911.1912.2314.5110.6412.620.87158.2110.07265.30264.351836.62207.313.225.04
Emiliania huxleyi (RCC1256)pCO2=750DIC manipulation closed13215232221317.986641997.75108.0425.202.631.1511.2612.908.159.330.72158.0216.75441.34439.771970.77143.482.233.49
Emiliania huxleyi (RCC1256)pCO2=750DIC manipulation closed23215230921197.996451984.94109.8524.472.671.2211.4913.998.7110.590.76158.0216.68439.51437.941959.83142.492.213.46
Emiliania huxleyi (RCC1256)pCO2=750DIC manipulation closed33215231721177.986601984.92107.3525.042.611.1813.0315.348.6010.130.66158.0415.83417.11415.621952.20148.972.313.62
Emiliania huxleyi (RCC1256)pCO2=1000DIC manipulation closed13215233721647.898352042.2789.7731.692.181.0411.1511.657.587.920.68157.9818.88497.31495.532012.36132.772.063.23
Emiliania huxleyi (RCC1256)pCO2=1000DIC manipulation closed23215235721577.878732038.6785.5833.132.081.1212.3213.858.119.120.66158.0416.33430.32428.781990.54150.132.333.65
Emiliania huxleyi (RCC1256)pCO2=1000DIC manipulation closed33215233321487.898292027.5189.1331.462.171.1413.0814.889.4910.790.73158.0117.51461.19459.551990.43140.062.173.40
Emiliania huxleyi (NZEH)pCO2=180TA manipulation closed13215259120968.402311827.13259.908.766.321.1511.5013.218.9610.300.78158.485.19136.66136.171732.65358.175.558.70
Emiliania huxleyi (NZEH)pCO2=180TA manipulation closed23215255320878.392361824.86253.678.956.171.298.4710.9012.9016.611.52158.445.61147.74147.211745.25336.155.218.17
Emiliania huxleyi (NZEH)pCO2=180TA manipulation closed33215257620858.402301817.76258.578.726.281.199.7211.5511.0613.141.14158.475.19136.81136.321725.13354.685.508.62
Emiliania huxleyi (NZEH)pCO2=380TA manipulation closed13215238220828.183991903.34163.1415.153.971.199.6311.4910.0411.981.04158.239.87260.15259.221856.19215.943.355.25
Emiliania huxleyi (NZEH)pCO2=380TA manipulation closed23215236320718.223601880.93176.7713.654.301.1910.4212.4610.7612.861.03158.2110.10266.02265.071850.93209.983.265.10
Emiliania huxleyi (NZEH)pCO2=380TA manipulation closed33215235220568.233481863.31179.1913.224.361.2611.0013.8511.5514.551.05158.229.81258.37257.451833.95212.253.295.16
Emiliania huxleyi (NZEH)pCO2=750TA manipulation closed13215225820387.927331919.8990.4327.802.201.1910.7212.739.6011.390.90158.0913.46354.69353.431864.70159.842.483.88
Emiliania huxleyi (NZEH)pCO2=750TA manipulation closed23215225720477.976531921.09101.5324.802.471.2810.7913.819.4712.130.88158.0714.24375.15373.821879.27153.492.383.73
Emiliania huxleyi (NZEH)pCO2=750TA manipulation closed33215225720537.976551926.59101.8224.872.471.1812.2714.4710.8612.810.88158.0614.74388.40387.021888.54149.722.323.64
Emiliania huxleyi (NZEH)pCO2=1000TA manipulation closed13215223520837.6912831979.5054.9048.681.331.2110.5212.718.6410.440.82157.9419.98526.27524.401945.73117.291.822.85
Emiliania huxleyi (NZEH)pCO2=1000TA manipulation closed23215223620877.809951978.0770.6837.761.721.1711.1113.059.3711.000.84157.9320.39537.18535.261951.07115.541.792.81
Emiliania huxleyi (NZEH)pCO2=1000TA manipulation closed33215223720737.7012471970.0555.9147.351.361.1511.3013.0110.0011.520.89157.9718.51487.70485.971929.97124.521.933.03
Emiliania huxleyi (NZEH)pCO2=180DIC manipulation closed13215233219238.153971766.42141.3015.063.431.2011.7214.0211.1613.350.95158.415.72150.80150.261630.01287.264.466.98
Emiliania huxleyi (NZEH)pCO2=180DIC manipulation closed23215230419138.144051759.61137.5515.353.341.2211.1813.6616.6820.381.49158.386.03158.75158.181633.07273.904.256.65
Emiliania huxleyi (NZEH)pCO2=180DIC manipulation closed33215230218998.134121750.01133.6815.633.251.2411.6314.4212.4915.491.07158.405.70150.18149.651611.41281.894.376.85
Emiliania huxleyi (NZEH)pCO2=380DIC manipulation closed13215227120207.946921900.0593.7126.282.281.2412.4815.4410.7313.270.86158.1511.49302.68301.601828.43180.082.794.38
Emiliania huxleyi (NZEH)pCO2=380DIC manipulation closed23215226619987.976371874.3199.0624.192.411.2712.0815.3812.0415.331.00158.1910.46275.64274.651796.61190.932.964.64
Emiliania huxleyi (NZEH)pCO2=380DIC manipulation closed33215229220587.956891933.9397.6126.142.371.2312.3315.1810.2512.620.83158.1212.82337.68336.471875.37169.812.634.13
Emiliania huxleyi (NZEH)pCO2=750DIC manipulation closed13215229221167.858972002.0080.2634.061.951.2011.7914.1310.5812.680.90157.9917.91471.96470.271964.73133.352.073.24
Emiliania huxleyi (NZEH)pCO2=750DIC manipulation closed23215229421217.8010112010.5171.8438.381.751.1512.1914.0410.4612.050.86157.9818.28481.48479.761971.15131.572.043.20
Emiliania huxleyi (NZEH)pCO2=750DIC manipulation closed33215229721187.829642006.1675.0636.571.821.2212.6715.4711.0713.510.87158.0017.66465.17463.511965.01135.342.103.29
Emiliania huxleyi (NZEH)pCO2=1000DIC manipulation closed13215230821607.7910542048.7571.5440.021.741.0912.4513.5510.1911.080.82157.9221.64569.98567.952021.47116.891.812.84
Emiliania huxleyi (NZEH)pCO2=1000DIC manipulation closed23215231321957.8010472080.9474.3539.731.811.2013.6616.4010.7912.960.79157.8426.57700.12697.622068.7699.671.552.42
Emiliania huxleyi (NZEH)pCO2=1000DIC manipulation closed33215231321977.7810982084.6571.1341.671.731.1813.9416.439.8711.640.71157.8426.95709.98707.442071.5198.541.532.39
Emiliania huxleyi (NZEH)pCO2=180DIC manipulation open13215234519088.511581607.55294.585.987.161.088.569.288.429.140.98158.445.14135.35134.871596.02306.844.767.45
Emiliania huxleyi (NZEH)pCO2=180DIC manipulation open23215236019278.511591623.61297.526.047.230.859.868.4110.839.231.10158.445.31139.84139.341616.89304.814.737.41
Emiliania huxleyi (NZEH)pCO2=180DIC manipulation open33215234719058.521531599.44299.925.827.291.037.297.547.507.751.03158.455.04132.76132.281589.62310.344.817.54
Emiliania huxleyi (NZEH)pCO2=380DIC manipulation open13215232820538.253311853.57186.6612.564.541.098.669.4410.0510.961.16158.1910.66280.82279.821844.76197.593.064.80
Emiliania huxleyi (NZEH)pCO2=380DIC manipulation open23215231520518.263221848.15190.4512.234.631.068.749.279.389.961.07158.1711.15293.72292.681849.89189.962.954.62
Emiliania huxleyi (NZEH)pCO2=380DIC manipulation open33215232220508.223561861.41174.9413.514.251.099.4910.339.049.850.95158.1910.77283.64282.631843.82195.423.034.75
Emiliania huxleyi (NZEH)pCO2=1000DIC manipulation open13215235822107.878942088.0987.6633.932.131.0610.1810.836.687.100.66157.9222.42590.57588.462069.36118.221.832.87
Emiliania huxleyi (NZEH)pCO2=1000DIC manipulation open23215236222107.849592091.3381.9336.411.991.139.6210.857.608.570.79157.9321.91577.26575.212067.37120.721.872.93
Emiliania huxleyi (NZEH)pCO2=1000DIC manipulation open33215236322137.888742089.6689.7733.182.181.079.4010.017.838.340.83157.9222.21585.09583.002071.24119.551.852.90