Langer, Gerald; Bode, Maya (2011): Seawater carbonate chemistry, growth rate and morphology of Calcidiscus leptoporus (RCC1135) during experiments, 2011 [dataset]. PANGAEA, https://doi.org/10.1594/PANGAEA.763286, Supplement to: Langer, G; Bode, M (2011): CO2 mediation of adverse effects of seawater acidification in Calcidiscus leptoporus. Geochemistry, Geophysics, Geosystems, 12(5), Q05001, https://doi.org/10.1029/2010GC003393
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Abstract:
The coccolithophore Calcidiscus leptoporus (strain RCC1135) was grown in dilute batch culture at CO2 levels ranging from ~200 to ~1600 µatm. Increasing CO2 concentration led to an increased percentage of malformed coccoliths and eventually (at ~1500 µatm CO2) to aggregation of cells. Carbonate chemistry of natural seawater was manipulated in three ways: first, addition of acid; second, addition of a HCO3/CO3 solution; and third, addition of both acid and HCO3/CO3 solution. The data set allowed the disentangling of putative effects of the different parameters of the carbonate system. It is concluded that CO2 is the parameter of the carbonate system which causes both aberrant coccolithogenesis and aggregation of cells.
Keyword(s):
Project(s):
Funding:
Seventh Framework Programme (FP7), grant/award no. 265103: Mediterranean Sea Acidification in a Changing Climate
Sixth Framework Programme (FP6), grant/award no. 511106: European network of excellence for Ocean Ecosystems Analysis
Comment:
In order to allow full comparability with other ocean acidification data sets, the R package seacarb (Lavigne and Gattuso, 2011) was used to compute a complete and consistent set of carbonate system variables, as described by Nisumaa et al. (2010). In this dataset the original values were archived in addition with the recalculated parameters (see related PI).
Parameter(s):
License:
Creative Commons Attribution 3.0 Unported (CC-BY-3.0)
Status:
Curation Level: Enhanced curation (CurationLevelC)
Size:
246 data points
Data
1 ID | 2 Exp treat | 3 Sal | 4 Temp [°C] (Conductivity meter (WTW, Weil...) | 5 CO2 [µmol/kg] (Calculated using CO2SYS) | 6 [HCO3]- [µmol/kg] (Calculated using CO2SYS) | 7 pCO2water_SST_wet [µatm] (Calculated using CO2SYS) | 8 [CO3]2- [µmol/kg] (Calculated using CO2SYS) | 9 DIC [µmol/kg] (Photometrically using autoana...) | 10 AT [µmol/kg] (Alkalinity, Gran titration (G...) | 11 pH (Total scale, Conductivity met...) | 12 Omega Cal (Calculated using CO2SYS) | 13 PIC/cell [pg/#] (Calculated, see reference(s)) | 14 PIC/cell std dev [±] | 15 POC/cell [pg/#] (Gas chromatography (EURO EA E...) | 16 POC cont/cell std dev [±] | 17 PIC prod/cell [pg/#/day] (Calculated, see reference(s)) | 18 PIC prod std dev [±] | 19 POC prod/cell [pg/#/day] (Calculated, see reference(s)) | 20 POC prod std dev [±] | 21 PIC/POC (Calculated) | 22 PIC/POC ratio std dev [±] | 23 µ [#/day] (Calculated, see reference(s)) | 24 µ std dev [±] | 25 C. leptoporus morph [%] (Normal) | 26 C. leptoporus morph std dev [±] (Normal) | 27 C. leptoporus morph [%] (Malformed) | 28 C. leptoporus morph std dev [±] (Malformed) | 29 C. leptoporus morph [%] (Incomplete) | 30 C. leptoporus morph std dev [±] (Incomplete) | 31 C. leptoporus morph [%] (Malformed and incomplete) | 32 C. leptoporus morph std dev [±] (Malformed and incomplete) | 33 CSC flag (Calculated using seacarb afte...) | 34 CO2 [µmol/kg] (Calculated using seacarb afte...) | 35 pCO2water_SST_wet [µatm] (Calculated using seacarb afte...) | 36 fCO2water_SST_wet [µatm] (Calculated using seacarb afte...) | 37 [HCO3]- [µmol/kg] (Calculated using seacarb afte...) | 38 [CO3]2- [µmol/kg] (Calculated using seacarb afte...) | 39 DIC [µmol/kg] (Calculated using seacarb afte...) | 40 Omega Arg (Calculated using seacarb afte...) | 41 Omega Cal (Calculated using seacarb afte...) |
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Experiment 1 | pCO2=215 | 32 | 20 | 7.1 | 1879 | 215 | 336.3 | 2222 | 2720 | 8.33 | 8.22 | 91.1 | 5.9 | 59.8 | 7.1 | 63.8 | 4.1 | 38.1 | 5.0 | 1.7 | 0.2 | 0.70 | 0.03 | 88.6 | 0.9 | 6.9 | 1.0 | 1.3 | 0.4 | 3.2 | 0.8 | 8 | 7.14 | 217.62 | 216.89 | 1910.15 | 341.70 | 2259.0 | 5.39 | 8.35 |
Experiment 2 | pCO2=917 | 32 | 20 | 30.1 | 8239 | 917 | 1515.0 | 9783 | 11439 | 8.34 | 37.00 | 127.8 | 12.0 | 71.0 | 12.0 | 75.8 | 7.1 | 42.1 | 7.2 | 1.8 | 0.3 | 0.59 | 0.05 | 7.6 | 0.3 | 15.4 | 2.6 | 2.8 | 0.8 | 74.2 | 3.0 | 8 | 30.26 | 921.79 | 918.70 | 8279.36 | 1515.56 | 9825.2 | 23.92 | 37.03 |
Experiment 3 | pCO2=969 | 32 | 20 | 31.8 | 2090 | 969 | 93.4 | 2216 | 2354 | 7.72 | 2.28 | 111.0 | 4.1 | 80.0 | 3.3 | 75.9 | 2.8 | 54.7 | 2.3 | 1.4 | 0.1 | 0.68 | 0.06 | 30.6 | 1.6 | 20.9 | 2.2 | 1.2 | 1.9 | 47.2 | 2.5 | 8 | 32.41 | 987.28 | 983.98 | 2127.19 | 93.41 | 2253.0 | 1.47 | 2.28 |
Experiment 4 | pCO2=1269 | 32 | 20 | 41.6 | 2084 | 1269 | 70.2 | 2196 | 2291 | 7.60 | 1.72 | 100.0 | 18.3 | 65.3 | 12.5 | 63.4 | 11.8 | 42.2 | 8.1 | 1.6 | 0.7 | 0.65 | 0.04 | 14.3 | 1.6 | 17.0 | 2.2 | 1.3 | 0.7 | 67.5 | 1.9 | 8 | 42.56 | 1296.36 | 1292.02 | 2118.80 | 70.58 | 2231.9 | 1.11 | 1.72 |
Experiment 5 | pCO2=1634 | 32 | 20 | 53.6 | 2057 | 1634 | 53.0 | 2163 | 2222 | 7.49 | 1.29 | 181.9 | 20.3 | 171.8 | 16.0 | 62.0 | 6.9 | 58.6 | 5.4 | 1.1 | 0.1 | 0.34 | 0.07 | 1.4 | 0.5 | 2.8 | 1.2 | 1.1 | 0.1 | 94.8 | 1.7 | 8 | 54.06 | 1646.90 | 1641.39 | 2089.46 | 54.03 | 2197.6 | 0.85 | 1.32 |
Experiment 6 | pCO2=1532 | 32 | 20 | 50.3 | 4571 | 1532 | 275.0 | 4897 | 5178 | 7.86 | 6.72 | 87.6 | 16.1 | 136.5 | 23.1 | 24.8 | 4.6 | 38.6 | 6.5 | 0.6 | 0.1 | 0.21 | 0.01 | 1.1 | 0.3 | 3.0 | 0.9 | 2.6 | 1.0 | 93.3 | 1.5 | 8 | 50.45 | 1536.78 | 1531.63 | 4570.62 | 277.05 | 4898.1 | 4.37 | 6.77 |