Gärdes, Astrid; Iversen, Morten Hvitfeldt; Grossart, Hans-Peter; Passow, Uta; Ullrich, Matthias S (2010): (Supplementary Table 2) Phylogenetic affiliation of bacterial strains isolated from Halichondria panacea [dataset]. PANGAEA, https://doi.org/10.1594/PANGAEA.761007, In supplement to: Gärdes, A et al. (2011): Diatom-associated bacteria are required for aggregation of Thalassiosira weissflogii. The ISME Journal, 5(3), 436-445, https://doi.org/10.1038/ismej.2010.145
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Project(s):
Coverage:
Latitude: 54.183500 * Longitude: 7.887300
Date/Time Start: 1997-01-01T00:00:00 * Date/Time End: 1999-01-31T00:00:00
Event(s):
German_Bight_1997-1999 * Latitude: 54.183500 * Longitude: 7.887300 * Date/Time Start: 1997-01-01T00:00:00 * Date/Time End: 1999-01-31T00:00:00 * Location: German Bight, North Sea * Method/Device: Sampling by diver (DIVER) * Comment: Halichondria panicea (Porifera, Demospongiae, Halichondriida, Halichondridae) were collected at four locations near the island of Helgoland (German Bight, North Sea) by scuba diving every 3 months from October 1997 till January 1999.
Comment:
Wichels et. al. 2006: Fems Microbiology Ecology 56:102-118
Parameter(s):
| # | Name | Short Name | Unit | Principal Investigator | Method/Device | Comment |
|---|---|---|---|---|---|---|
| 1 | Strain | Strain | Iversen, Morten Hvitfeldt | see reference(s) | ||
| 2 | Best match | Best m | Iversen, Morten Hvitfeldt | see reference(s) | ||
| 3 | Similarity | Similarity | % | Iversen, Morten Hvitfeldt | see reference(s) |
License:
Creative Commons Attribution 3.0 Unported (CC-BY-3.0)
Size:
93 data points
Data
| 1 Strain | 2 Best m | 3 Similarity [%] |
|---|---|---|
| Ex1 | Pseudoalteromonas nigrifaciens | 94 |
| Ex11 | Rugeria atlantika | 96 |
| Ex5 | Phsychroserpens burtonensis | 98 |
| Ex7 | Roseobacter literalis | 98 |
| Ex8 | Leifsonia aquatica | 89 |
| Ex9 | Phsychroserpens sp. | 97 |
| H11 | Pseudoalteromonas tetraodinis | 95 |
| H14 | Alteromonas sp. | 98 |
| H22 | Pseudoalteromonas sp. | 98 |
| H23 | Glaciecola sp. | 97 |
| H24 | Sulfitobacter sp. | 96 |
| H92 | Pseudoalteromonas carragenorra | 97 |
| H94 | Glaciecola sp. | 98 |
| H3 | Microscilla arenaria | 94 |
| Noc A1 | Marinobacter testaceum | 97 |
| NocA2 | Vibrio pecenticida | 98 |
| NocA3 | Micrococcus luteus | 99 |
| NocA4 | Vibrio pecenticida | 97 |
| NocA5 | Phsychrobacter immobilis | 90 |
| NocA6 | Pseudoalteromonas sp. | 98 |
| NocA7 | Pseudoalteromonas sp. | 98 |
| NocA8 | Pseudolateromonas sp. | 97 |
| NocA9 | Pseudolateromonas sp. | 97 |
| NocA10 | Marinobacter sp. | 90 |
| NocA11 | Marinobacter sp. | 94 |
| NocA12 | Marinobacter sp. | 94 |
| Zo12 | Pseudoalteromonas nigrifaciens | 97 |
| Zo2 | Vibrio tapefis | 97 |
| Zo20 | Alteromonas macleodii | 98 |
| Zo24 | Micrococcus antarticus | 97 |
| Zo5 | Vibrio splenadius | 98 |