Czerny, Jan; Barcelos e Ramos, Joana; Riebesell, Ulf (2009): Seawater carbonate chemistry and processes during experiments with cyanobacterium Nodularia spumigena, 2009 [dataset]. PANGAEA, https://doi.org/10.1594/PANGAEA.726862, Supplement to: Czerny, J et al. (2009): Influence of elevated CO2 concentrations on cell division and nitrogen fixation rates in the bloom-forming cyanobacterium Nodularia spumigena. Biogeosciences, 6(9), 1865-1875, https://doi.org/10.5194/bg-6-1865-2009
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Abstract:
The surface ocean absorbs large quantities of the CO2 emitted to the atmosphere from human activities. As this CO2 dissolves in seawater, it reacts to form carbonic acid. While this phenomenon, called ocean acidification, has been found to adversely affect many calcifying organisms, some photosynthetic organisms appear to benefit from increasing [CO2]. Among these is the cyanobacterium Trichodesmium, a predominant diazotroph (nitrogen-fixing) in large parts of the oligotrophic oceans, which responded with increased carbon and nitrogen fixation at elevated pCO2. With the mechanism underlying this CO2 stimulation still unknown, the question arises whether this is a common response of diazotrophic cyanobacteria. In this study we therefore investigate the physiological response of Nodularia spumigena, a heterocystous bloom-forming diazotroph of the Baltic Sea, to CO2-induced changes in seawater carbonate chemistry. N. spumigena reacted to seawater acidification/carbonation with reduced cell division rates and nitrogen fixation rates, accompanied by significant changes in carbon and phosphorus quota and elemental composition of the formed biomass. Possible explanations for the contrasting physiological responses of Nodularia compared to Trichodesmium may be found in the different ecological strategies of non-heterocystous (Trichodesmium) and heterocystous (Nodularia) cyanobacteria.
Keyword(s):
Project(s):
Funding:
Sixth Framework Programme (FP6), grant/award no. 511106: European network of excellence for Ocean Ecosystems Analysis
Comment:
In order to allow full comparability with other ocean acidification data sets, the R package seacarb (Lavigne and Gattuso, 2011) was used to compute a complete and consistent set of carbonate system variables, as described by Nisumaa et al. (2010). In this dataset the original values were archived in addition with the recalculated parameters (see related PI).
Parameter(s):
License:
Creative Commons Attribution 3.0 Unported (CC-BY-3.0)
Status:
Curation Level: Enhanced curation (CurationLevelC)
Size:
614 data points
Data
1 Exp treat | 2 Sal | 3 Temp [°C] | 4 PAR [µmol/m2/s] | 5 pH (Free scale, constants (K1 and...) | 6 pH (Total scale, Calculated using...) | 7 CO2 [µmol/kg] (Calculated using seacarb afte...) | 8 pCO2water_SST_wet [µatm] (Calculated using seacarb afte...) | 9 fCO2water_SST_wet [µatm] (Calculated using seacarb afte...) | 10 [HCO3]- [µmol/kg] (Calculated using seacarb afte...) | 11 [CO3]2- [µmol/kg] (Calculated using seacarb afte...) | 12 DIC [µmol/kg] (Mean from start to end, const...) | 13 AT [µmol/kg] (Constants (K1 and K2) by Roy ...) | 14 Omega Arg (Calculated using seacarb afte...) | 15 Omega Cal (Calculated using seacarb afte...) | 16 DIC [µmol/kg] (Start, Automated segmented-fl...) | 17 DIC [µmol/kg] (End, Automated segmented-flow...) | 18 DIC [µmol/kg] (Consumption, constants (K1 an...) | 19 Duration [days] | 20 Chl a [µg/l] (Start, Fluorometry) | 21 Chl a [µg/l] (End, Fluorometry) | 22 POP [µmol/l] (Spectrophotometer Hitachi U-2000) | 23 POP [µg] (In cell, Calculated) | 24 POP prod/cell [pmol/#/day] (Calculated) | 25 [PO4]3- [µmol/l] (Consumption during the experi...) | 26 PON [µmol/l] (Element analyser CNS, EURO EA) | 27 N/cell [pmol/#] | 28 PON prod [pg/#/day] | 29 POC [µmol/l] (End) | 30 C/cell [pmol/#] | 31 POC prod/cell [pg/#/day] (Calculated) | 32 N. spumigena [#/l] (Start, Counting from image) | 33 N. spumigena [#/l] (End, Counting from image) | 34 Cell division [#/day] | 35 C2H2 reduction [µmol/l/h] | 36 N2 fix/cell [fmol/#/h] (Calculated using a convertion...) |
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Bottle_1-pCO2=162 | 8 | 16 | 85 | 8.55 | 8.52 | 6.74 | 160.06 | 159.49 | 1754.4 | 201.83 | 1963 | 2188 | 3.26 | 5.79 | 1981 | 1946 | 35.4 | 7 | 1.000 | 16.5 | 0.465 | 0.00000088 | 0.451 | 1.20 | 14.4 | 0.880 | 6.33 | 81.55 | 4.969 | 30.62 | 451698 | 16397683 | 0.51 | 1.6200 | 7.792 |
Bottle_2-pCO2=153 | 8 | 16 | 85 | 8.57 | 8.55 | 6.33 | 150.39 | 149.86 | 1739.5 | 211.17 | 1957 | 2193 | 3.41 | 6.06 | 1981 | 1933 | 47.6 | 7 | 1.000 | 17.9 | 0.478 | 0.00000078 | 0.416 | 1.13 | 13.8 | 0.725 | 5.43 | 77.02 | 4.045 | 25.96 | 451698 | 19025144 | 0.53 | 1.5027 | 6.115 |
Bottle_3-pCO2=154 | 8 | 16 | 85 | 8.57 | 8.54 | 6.39 | 151.91 | 151.37 | 1741.2 | 209.45 | 1957 | 2191 | 3.38 | 6.01 | 1981 | 1933 | 47.9 | 7 | 1.000 | 17.7 | 0.478 | 0.00000091 | 0.466 | 1.08 | 15.2 | 0.934 | 6.70 | 81.24 | 4.982 | 30.65 | 451698 | 16291604 | 0.51 | 1.3561 | 6.775 |
Bottle_4-pCO2=297 | 8 | 16 | 85 | 8.31 | 8.28 | 12.20 | 289.90 | 288.88 | 1828.7 | 121.07 | 1962 | 2090 | 1.96 | 3.47 | 1981 | 1943 | 38.2 | 7 | 1.000 | 12.7 | 0.392 | 0.00000080 | 0.346 | 0.98 | 10.7 | 0.700 | 4.27 | 62.68 | 4.106 | 21.45 | 725947 | 15251505 | 0.43 | 0.9952 | 5.263 |
Bottle_5-pCO2=295 | 8 | 16 | 85 | 8.31 | 8.28 | 12.21 | 290.16 | 289.14 | 1829.7 | 121.09 | 1963 | 2091 | 1.96 | 3.47 | 1981 | 1945 | 36.0 | 7 | 1.000 | 13.2 | 0.318 | 0.00000083 | 0.330 | 0.94 | 9.2 | 0.771 | 4.31 | 56.27 | 4.727 | 22.68 | 725947 | 11894668 | 0.40 | 0.9875 | 6.887 |
Bottle_6-pCO2=313 | 8 | 16 | 85 | 8.29 | 8.26 | 12.81 | 304.26 | 303.19 | 1836.8 | 116.38 | 1966 | 2088 | 1.88 | 3.34 | 1981 | 1950 | 31.0 | 7 | 1.000 | 11.3 | 0.337 | 0.00000075 | 0.315 | 0.91 | 11.5 | 0.821 | 4.86 | 65.03 | 4.636 | 23.55 | 725947 | 14016005 | 0.42 | 1.0126 | 5.844 |
Bottle_7-pCO2=446 | 8 | 16 | 85 | 8.14 | 8.12 | 18.06 | 429.19 | 427.68 | 1866.7 | 85.21 | 1970 | 2051 | 1.38 | 2.45 | 1981 | 1959 | 22.3 | 7 | 1.000 | 6.9 | 0.253 | 0.00000101 | 0.348 | 0.72 | 7.3 | 0.949 | 4.58 | 44.84 | 5.791 | 23.93 | 696024 | 7737556 | 0.34 | 0.6330 | 6.236 |
Bottle_8-pCO2=435 | 8 | 16 | 85 | 8.15 | 8.13 | 17.71 | 420.77 | 419.28 | 1863.7 | 86.63 | 1968 | 2051 | 1.40 | 2.49 | 1981 | 1954 | 27.0 | 7 | 1.000 | 7.3 | 0.263 | 0.00000087 | 0.324 | 0.78 | 7.1 | 0.766 | 3.98 | 44.37 | 4.760 | 21.18 | 696024 | 9312679 | 0.37 | 0.6273 | 5.352 |
Bottle_9-pCO2=459 | 8 | 16 | 85 | 8.13 | 8.11 | 18.55 | 440.83 | 439.28 | 1867.4 | 83.02 | 1969 | 2047 | 1.34 | 2.38 | 1981 | 1957 | 23.7 | 7 | 1.000 | 7.3 | 0.326 | 0.00000107 | 0.399 | 0.69 | 7.9 | 0.835 | 4.35 | 47.52 | 5.050 | 22.56 | 696024 | 9402616 | 0.37 | 0.7311 | 6.146 |
Bottle_11-pCO2=508 | 8 | 16 | 85 | 8.08 | 8.06 | 20.59 | 489.24 | 487.51 | 1861.1 | 74.30 | 1956 | 2022 | 1.20 | 2.13 | 1981 | 1931 | 49.6 | 7 | 1.000 | 7.7 | 0.379 | 0.00000120 | 0.500 | 1.13 | 8.7 | 0.886 | 5.18 | 57.51 | 5.876 | 29.42 | 528176 | 9778288 | 0.42 | 0.7045 | 5.656 |
Bottle_12-pCO2=532 | 8 | 16 | 85 | 8.06 | 8.05 | 21.44 | 509.44 | 507.64 | 1864.0 | 71.58 | 1957 | 2019 | 1.16 | 2.05 | 1981 | 1934 | 47.2 | 7 | 1.000 | 9.7 | 0.351 | 0.00000114 | 0.471 | 1.28 | 9.7 | 1.014 | 5.87 | 61.04 | 6.397 | 31.75 | 528176 | 9534995 | 0.41 | 0.7408 | 6.107 |
Bottle_13-pCO2=723 | 8 | 16 | 85 | 7.98 | 7.92 | 29.09 | 691.12 | 688.68 | 1869.8 | 53.09 | 1952 | 1985 | 0.86 | 1.52 | 1981 | 1923 | 57.9 | 7 | 1.000 | 7.9 | 0.342 | 0.00000118 | 0.367 | 1.21 | 8.4 | 0.938 | 4.08 | 59.22 | 6.595 | 24.58 | 1022456 | 8973014 | 0.31 | 0.6640 | 5.848 |
Bottle_14-pCO2=697 | 8 | 16 | 85 | 7.94 | 7.93 | 28.11 | 667.90 | 665.55 | 1868.0 | 54.83 | 1951 | 1987 | 0.89 | 1.57 | 1981 | 1920 | 60.8 | 7 | 1.000 | 7.9 | 0.342 | 0.00000095 | 0.325 | 1.90 | 8.5 | 0.758 | 3.63 | 58.28 | 5.228 | 21.42 | 1022456 | 11137195 | 0.34 | 0.7382 | 5.265 |
Bottle_15-pCO2=731 | 8 | 16 | 85 | 7.93 | 7.91 | 29.46 | 699.83 | 697.36 | 1872.0 | 52.55 | 1954 | 1986 | 0.85 | 1.51 | 1981 | 1926 | 55.0 | 7 | 1.000 | 7.7 | 0.339 | 0.00000092 | 0.317 | 0.83 | 9.0 | 0.784 | 3.79 | 62.23 | 5.432 | 22.51 | 1022456 | 11446580 | 0.35 | 0.7129 | 4.889 |
Bottle_16-pCO2=215 | 8 | 16 | 85 | 8.44 | 8.41 | 8.90 | 211.39 | 210.65 | 1802.8 | 161.35 | 1973 | 2150 | 2.61 | 4.63 | 1981 | 1965 | 16.3 | 13 | 0.048 | 9.5 | 4296294 | ||||||||||||||
Bottle_17-pCO2=349 | 8 | 16 | 85 | 8.24 | 8.22 | 14.27 | 339.01 | 337.82 | 1853.4 | 106.34 | 1974 | 2083 | 1.72 | 3.05 | 1981 | 1967 | 14.3 | 13 | 0.048 | 7.8 | 5678546 | ||||||||||||||
Bottle_18-pCO2=506 | 8 | 16 | 85 | 8.09 | 8.07 | 20.48 | 486.56 | 484.85 | 1877.5 | 76.03 | 1974 | 2042 | 1.23 | 2.18 | 1981 | 1966 | 15.0 | 13 | 0.048 | 6.4 | 4483941 | ||||||||||||||
Bottle_19-pCO2=587 | 8 | 16 | 85 | 8.02 | 8.01 | 23.68 | 562.57 | 560.59 | 1877.6 | 65.76 | 1967 | 2020 | 1.06 | 1.89 | 1981 | 1952 | 28.6 | 20 | 0.048 | 5.8 | 3040185 | ||||||||||||||
Bottle_20-pCO2=707 | 8 | 16 | 85 | 7.94 | 7.93 | 28.41 | 674.94 | 672.56 | 1867.4 | 54.22 | 1950 | 1985 | 0.88 | 1.56 | 1981 | 1919 | 62.1 | 20 | 0.048 | 12.5 | 12784145 |