Krakau, Manuela (2008): (Table 3.3) Genetic diversity indices are shown for cockle sequences [dataset]. PANGAEA, https://doi.org/10.1594/PANGAEA.706821
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Published: 2008-10-30 • DOI registered: 2008-11-30
Related to:
Krakau, Manuela (2008): Biogeographic patterns of the marine bivalve Cerastoderma edule along the European coasts (Biogeographische Muster der Meeresmuschel Cerastoderma edule entlang der europäischen Atlantikküste) [dissertation]. Christian-Albrechts-University of Kiel, Germany, 149 pp, urn:nbn:de:gbv:8-diss-29907
Project(s):
Coastal Ecology @ AWI (AWI_Coast)
Coverage:
Median Latitude: 53.430704 * Median Longitude: 4.111400 * South-bound Latitude: 34.833300 * West-bound Longitude: -9.000000 * North-bound Latitude: 69.166700 * East-bound Longitude: 36.083300
Date/Time Start: 2004-08-01T00:00:00 * Date/Time End: 2007-09-01T00:00:00
Minimum DEPTH, sediment/rock: 0 m * Maximum DEPTH, sediment/rock: 0 m
Event(s):
mk_AL * Latitude: 37.116700 * Longitude: -8.616700 * Date/Time: 2005-09-01T00:00:00 * Location: Northeast Atlantic * Method/Device: Sampling by hand (HAND)
Parameter(s):
| # | Name | Short Name | Unit | Principal Investigator | Method/Device | Comment |
|---|---|---|---|---|---|---|
| 1 | Event label | Event | ||||
| 2 | Date/Time of event | Date/Time | ||||
| 3 | Latitude of event | Latitude | ||||
| 4 | Longitude of event | Longitude | ||||
| 5 | DEPTH, sediment/rock | Depth sed | m | Geocode | ||
| 6 | Sample amount | N | # | Krakau, Manuela | ||
| 7 | Number of all haplotypes | Ht | # | Krakau, Manuela | ||
| 8 | Number of unique haplotypes | Hu | # | Krakau, Manuela | ||
| 9 | Number of polymorphic sites | polymorphic sites | # | Krakau, Manuela | ||
| 10 | Haplotype diversity | h | Krakau, Manuela | Calculated | ||
| 11 | Haplotype diversity, standard deviation | h std dev | ± | Krakau, Manuela | Calculated | |
| 12 | Nucleotide diversity | pi | Krakau, Manuela | Calculated | ||
| 13 | Nucleotide diversity, standard devation | pi std dev | ± | Krakau, Manuela | Calculated | |
| 14 | Average number of nucleotide differences | k | Krakau, Manuela | Calculated | ||
| 15 | Tajima's D | D | Krakau, Manuela | Calculated | ||
| 16 | Tajima's D p | D p | Krakau, Manuela | Calculated | ||
| 17 | Fu's Fs | Fs | Krakau, Manuela | Calculated |
License:
(UNKNOWN)
Size:
215 data points