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Rickaby, Rosalind E M; Henderiks, Jorijntje; Young, J N (2010): Seawater carbonate chemistry and biological processes of coccolithophore (Gephyrocapsa oceanica and Coccolithus pelagicus ssp. braarudii) during experiments, 2011 [dataset]. PANGAEA, https://doi.org/10.1594/PANGAEA.771912, Supplement to: Rickaby, REM et al. (2010): Perturbing phytoplankton: response and isotopic fractionation with changing carbonate chemistry in two coccolithophore species. Climate of the Past, 6(6), 771-785, https://doi.org/10.5194/cp-6-771-2010

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Abstract:
All species of coccolithophore appear to respond to perturbations of carbonate chemistry in a different way. Here, we show that the degree of malformation, growth rate and stable isotopic composition of organic matter and carbonate produced by two contrasting species of coccolithophore (Gephyrocapsa oceanica and Coccolithus pelagicus ssp. braarudii) are indicative of differences between their photosynthetic and calcification response to changing DIC levels (ranging from ~1100 to ~7800 µmol/kg) at constant pH (8.13 ± 0.02). Gephyrocapsa oceanica thrived under all conditions of DIC, showing evidence of increased growth rates at higher DIC, but C. braarudii was detrimentally affected at high DIC showing signs of malformation, and decreased growth rates. The carbon isotopic fractionation into organic matter and the coccoliths suggests that C. braarudii utilises a common internal pool of carbon for calcification and photosynthesis but G. oceanica relies on independent supplies for each process. All coccolithophores appear to utilize bicarbonate as their ultimate source of carbon for calcification resulting in the release of a proton. But, we suggest that this proton can be harnessed to enhance the supply of CO2(aq) for photosynthesis either from a large internal HCO3- pool which acts as a pH buffer (C. braarudii), or pumped externally to aid the diffusive supply of CO2 across the membrane from the abundant HCO3- (G. oceanica), likely mediated by an internal and external carbonic anhydrase respectively. Our simplified hypothetical spectrum of physiologies may provide a context to understand different species response to changing pH and DIC, the species-specific delta p and calcite "vital effects", as well as accounting for geological trends in coccolithophore cell size.
Keyword(s):
Biomass/Abundance/Elemental composition; Bottles or small containers/Aquaria (<20 L); Calcification/Dissolution; Chromista; Coccolithus braarudii; Gephyrocapsa oceanica; Growth/Morphology; Haptophyta; Laboratory experiment; Laboratory strains; Not applicable; Pelagos; Phytoplankton; Primary production/Photosynthesis; Single species
Funding:
Seventh Framework Programme (FP7), grant/award no. 211384: European Project on Ocean Acidification
Sixth Framework Programme (FP6), grant/award no. 511106: European network of excellence for Ocean Ecosystems Analysis
Comment:
In order to allow full comparability with other ocean acidification data sets, the R package seacarb (Lavigne and Gattuso, 2011) was used to compute a complete and consistent set of carbonate system variables, as described by Nisumaa et al. (2010). In this dataset the original values were archived in addition with the recalculated parameters (see related PI).
Parameter(s):
#NameShort NameUnitPrincipal InvestigatorMethod/DeviceComment
1Experimental treatmentExp treatRickaby, Rosalind E M
2SpeciesSpeciesRickaby, Rosalind E M
3SalinitySalRickaby, Rosalind E M
4Temperature, waterTemp°CRickaby, Rosalind E M
5Light:Dark cycleL:Dhh:hhRickaby, Rosalind E M
6Radiation, photosynthetically activePARµmol/m2/sRickaby, Rosalind E M
7Bicarbonate ion[HCO3]-µmol/kgRickaby, Rosalind E MCalculated using CO2SYS
8Carbonate ion[CO3]2-µmol/kgRickaby, Rosalind E MCalculated using CO2SYS
9Partial pressure of carbon dioxide (water) at sea surface temperature (wet air)pCO2water_SST_wetµatmRickaby, Rosalind E MCalculated using CO2SYS
10Carbon dioxideCO2µmol/kgRickaby, Rosalind E MMeasured
11pHpHRickaby, Rosalind E MCalculated using CO2SYSNBS scale
12Carbon, total, particulateTPCµg/lRickaby, Rosalind E MMass spectrometer ANCA-SL 20-20 Europa Scientific
13Carbon, organic, particulatePOCµg/lRickaby, Rosalind E MMass spectrometer ANCA-SL 20-20 Europa Scientific
14Nitrogen, organic, particulatePONµg/lRickaby, Rosalind E MTPC
15Nitrogen, organic, particulatePONµg/lRickaby, Rosalind E MPOC
16Gephyrocapsa oceanicaG. oceanica#/mlRickaby, Rosalind E Mas counted by CC
17Coccolithus braarudiiC. braarudii#/mlRickaby, Rosalind E Mas counted by CC
18Growth rateµ#/dayRickaby, Rosalind E MCalculated, see reference(s)as counted by CC
19Coccolithus braarudiiC. braarudii#/mlRickaby, Rosalind E MLM counts
20Growth rateµ#/dayRickaby, Rosalind E MCalculated, see reference(s)LM counts
21Total particulate carbon per cellTPC/cellpg/#Rickaby, Rosalind E M
22Carbon, organic, particulate, per cellPOC/cellpg/#Rickaby, Rosalind E M
23Particulate organic nitrogen per cellPON/cellpg/#Rickaby, Rosalind E MTPC
24Particulate organic nitrogen per cellPON/cellpg/#Rickaby, Rosalind E MPOC
25Carbon, inorganic, particulate, per cellPIC/cellpg/#Rickaby, Rosalind E M
26Particulate inorganic carbon/particulate organic carbon ratioPIC/POCRickaby, Rosalind E M
27Carbon, organic, particulate/Nitrogen, organic, particulate ratioPOC/PONRickaby, Rosalind E MMeasured
28Carbon, organic, particulate/Nitrogen, organic, particulate ratioPOC/PONRickaby, Rosalind E MMeasured
29Total particulate carbon production per cellTPC prod/cellpg/#Rickaby, Rosalind E M
30Particulate organic carbon production per cellPOC prod/cellpg/#Rickaby, Rosalind E M
31Particulate organic nitrogen production per cellPON prod/cellpg/#Rickaby, Rosalind E MTPC
32Particulate organic nitrogen production per cellPON prod/cellpg/#Rickaby, Rosalind E MPOC
33Particulate inorganic carbon production per cellPIC prod/cellpg/#Rickaby, Rosalind E M
34δ13C, dissolved inorganic carbonδ13C DIC‰ PDBRickaby, Rosalind E MMass spectrometer Finnigan Delta-ST0
35δ13C, dissolved inorganic carbonδ13C DIC‰ PDBRickaby, Rosalind E MMass spectrometer Finnigan Delta-STfin
36δ13C, carbon dioxide, atmosphericδ13C CO2‰ PDBRickaby, Rosalind E M
37Coccolithus braarudii, collapsed spheresC. braarudii spheres%Rickaby, Rosalind E M
38Coccolithus braarudii, intact spheresC. braarudii spheres#Rickaby, Rosalind E M
39Coccolithus braarudii, collapsed spheresC. braarudii spheres#Rickaby, Rosalind E M
40Coccolithus braarudii, malformedC. braarudii malformed%Rickaby, Rosalind E M
41Carbonate system computation flagCSC flagNisumaa, Anne-MarinCalculated using seacarb after Nisumaa et al. (2010)
42pHpHNisumaa, Anne-MarinCalculated using seacarb after Nisumaa et al. (2010)Total scale
43Carbon dioxideCO2µmol/kgNisumaa, Anne-MarinCalculated using seacarb after Nisumaa et al. (2010)
44Partial pressure of carbon dioxide (water) at sea surface temperature (wet air)pCO2water_SST_wetµatmNisumaa, Anne-MarinCalculated using seacarb after Nisumaa et al. (2010)
45Fugacity of carbon dioxide (water) at sea surface temperature (wet air)fCO2water_SST_wetµatmNisumaa, Anne-MarinCalculated using seacarb after Nisumaa et al. (2010)
46Bicarbonate ion[HCO3]-µmol/kgNisumaa, Anne-MarinCalculated using seacarb after Nisumaa et al. (2010)
47Carbonate ion[CO3]2-µmol/kgNisumaa, Anne-MarinCalculated using seacarb after Nisumaa et al. (2010)
48Carbon, inorganic, dissolvedDICµmol/kgNisumaa, Anne-MarinCalculated using seacarb after Nisumaa et al. (2010)
49Alkalinity, totalATµmol/kgNisumaa, Anne-MarinCalculated using seacarb after Nisumaa et al. (2010)
50Aragonite saturation stateOmega ArgNisumaa, Anne-MarinCalculated using seacarb after Nisumaa et al. (2010)
51Calcite saturation stateOmega CalNisumaa, Anne-MarinCalculated using seacarb after Nisumaa et al. (2010)
Status:
Curation Level: Enhanced curation (CurationLevelC)
Size:
1647 data points

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