Ganzert, Lars; Lipski, André; Hubberten, Hans-Wolfgang; Wagner, Dirk (2011): (Table 4) Closest phylogenetic affiliation of sequences and operational taxonomic units in nine soil samples from Livingston Island, South Shetland Archipelago [dataset]. PANGAEA, https://doi.org/10.1594/PANGAEA.847798, In supplement to: Ganzert, L et al. (2011): The impact of different soil parameters on the community structure of dominant bacteria from nine different soils located on Livingston Island, South Shetland Archipelago, Antarctica. FEMS Microbiology Ecology, 76(3), 476-491, https://doi.org/10.1111/j.1574-6941.2011.01068.x
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Coverage:
Median Latitude: -62.641004 * Median Longitude: -60.359298 * South-bound Latitude: -62.644470 * West-bound Longitude: -60.362720 * North-bound Latitude: -62.640030 * East-bound Longitude: -60.353265
Event(s):
Hurd_Penins_SP-A * Latitude: -62.641190 * Longitude: -60.353360 * Location: Antarctica * Method/Device: Soil profile (SOIL) * Comment: Sandy volcanic ashes with gravel; snowbed nearby, permafrost starting at 20cm depth
Parameter(s):
| # | Name | Short Name | Unit | Principal Investigator | Method/Device | Comment |
|---|---|---|---|---|---|---|
| 1 | Event label | Event | Ganzert, Lars | |||
| 2 | Latitude of event | Latitude | Ganzert, Lars | |||
| 3 | Longitude of event | Longitude | Ganzert, Lars | |||
| 4 | Taxon/taxa | Taxa | Ganzert, Lars | |||
| 5 | Group | Group | Ganzert, Lars | |||
| 6 | Number of sequences | Sequence no | # | Ganzert, Lars | Denaturing gradient gel electrophoresis (DGGE) | |
| 7 | Operational taxonomic unit | OTU | # | Ganzert, Lars | Denaturing gradient gel electrophoresis (DGGE) |
License:
Creative Commons Attribution 3.0 Unported (CC-BY-3.0)
Size:
450 data points
Data
| 1 Event | 2 Latitude | 3 Longitude | 4 Taxa | 5 Group | 6 Sequence no [#] | 7 OTU [#] |
|---|---|---|---|---|---|---|
| Hurd_Penins_T1-1 | -62.6401 | -60.3616 | Bacteroidetes | Total | 21 | 9 |
| Hurd_Penins_T1-1 | -62.6401 | -60.3616 | Bacteroidetes | Chitinophagaceae | 21 | |
| Hurd_Penins_T1-1 | -62.6401 | -60.3616 | Acidobacteria | Total | 1 | 1 |
| Hurd_Penins_T1-1 | -62.6401 | -60.3616 | Acidobacteria | Group 4 | 1 | |
| Hurd_Penins_T1-1 | -62.6401 | -60.3616 | Unclassified bacteria | Total | 1 | 1 |
| Hurd_Penins_T1-1 | -62.6401 | -60.3616 | Total | 23 | 11 | |
| Hurd_Penins_T1-2 | -62.6401 | -60.3614 | Gammaproteobacteria | Total | 1 | 1 |
| Hurd_Penins_T1-2 | -62.6401 | -60.3614 | Gammaproteobacteria | Methylobacter | 1 | |
| Hurd_Penins_T1-2 | -62.6401 | -60.3614 | Gemmatimonadetes | Total | 2 | 2 |
| Hurd_Penins_T1-2 | -62.6401 | -60.3614 | Gemmatimonadetes | Gemmatimonas | 2 | |
| Hurd_Penins_T1-2 | -62.6401 | -60.3614 | Acidobacteria | Total | 17 | 8 |
| Hurd_Penins_T1-2 | -62.6401 | -60.3614 | Acidobacteria | Group 4 | 9 | |
| Hurd_Penins_T1-2 | -62.6401 | -60.3614 | Acidobacteria | Group 6 | 4 | |
| Hurd_Penins_T1-2 | -62.6401 | -60.3614 | Acidobacteria | Group 7 | 3 | |
| Hurd_Penins_T1-2 | -62.6401 | -60.3614 | Acidobacteria | Group 17 | 1 | |
| Hurd_Penins_T1-2 | -62.6401 | -60.3614 | Total | 20 | 11 | |
| Hurd_Penins_T1-4 | -62.6401 | -60.3610 | Gammaproteobacteria | Total | 6 | 2 |
| Hurd_Penins_T1-4 | -62.6401 | -60.3610 | Gammaproteobacteria | Methylobacter | 6 | |
| Hurd_Penins_T1-4 | -62.6401 | -60.3610 | Bacteroidetes | Total | 4 | 3 |
| Hurd_Penins_T1-4 | -62.6401 | -60.3610 | Bacteroidetes | Chitinophagaceae | 3 | |
| Hurd_Penins_T1-4 | -62.6401 | -60.3610 | Bacteroidetes | Sphingobacteriales | 1 | |
| Hurd_Penins_T1-4 | -62.6401 | -60.3610 | Acidobacteria | Total | 9 | 4 |
| Hurd_Penins_T1-4 | -62.6401 | -60.3610 | Acidobacteria | Group 4 | 5 | |
| Hurd_Penins_T1-4 | -62.6401 | -60.3610 | Acidobacteria | Group 6 | 4 | |
| Hurd_Penins_T1-4 | -62.6401 | -60.3610 | Firmicutes | Total | 1 | 1 |
| Hurd_Penins_T1-4 | -62.6401 | -60.3610 | Firmicutes | Staphylococcus | 1 | |
| Hurd_Penins_T1-4 | -62.6401 | -60.3610 | Actinobacteria | Total | 6 | 3 |
| Hurd_Penins_T1-4 | -62.6401 | -60.3610 | Actinobacteria | Propionibacterium | 5 | |
| Hurd_Penins_T1-4 | -62.6401 | -60.3610 | Actinobacteria | Corynebacterium | 1 | |
| Hurd_Penins_T1-4 | -62.6401 | -60.3610 | Unclassified bacteria | Total | 1 | 1 |
| Hurd_Penins_T1-4 | -62.6401 | -60.3610 | Total | 27 | 14 | |
| Hurd_Penins_T1-4 | -62.6401 | -60.3610 | Bacteroidetes | Total | 14 | 12 |
| Hurd_Penins_T1-4 | -62.6401 | -60.3610 | Bacteroidetes | Chitinophagaceae | 4 | |
| Hurd_Penins_T1-4 | -62.6401 | -60.3610 | Bacteroidetes | Sphingobacteriales | 1 | |
| Hurd_Penins_T1-4 | -62.6401 | -60.3610 | Bacteroidetes | Unclassified Bacteroidetes | 6 | |
| Hurd_Penins_T1-4 | -62.6401 | -60.3610 | Bacteroidetes | Ferruginibacter | 2 | |
| Hurd_Penins_T1-4 | -62.6401 | -60.3610 | Bacteroidetes | Terrimonas | 1 | |
| Hurd_Penins_T1-4 | -62.6401 | -60.3610 | Bacteroidetes | Tannerella | 1 | |
| Hurd_Penins_T1-4 | -62.6401 | -60.3610 | Acidobacteria | Total | 7 | 3 |
| Hurd_Penins_T1-4 | -62.6401 | -60.3610 | Acidobacteria | Group 4 | 7 | |
| Hurd_Penins_T1-4 | -62.6401 | -60.3610 | Nitrospirae | Total | 1 | 1 |
| Hurd_Penins_T1-4 | -62.6401 | -60.3610 | Nitrospirae | Nitrospiraceae | 1 | |
| Hurd_Penins_T1-4 | -62.6401 | -60.3610 | Chloroflexi | Total | 1 | 1 |
| Hurd_Penins_T1-4 | -62.6401 | -60.3610 | Chloroflexi | Anaerolineaceae | 1 | |
| Hurd_Penins_T1-4 | -62.6401 | -60.3610 | Unclassified bacteria | Total | 2 | 2 |
| Hurd_Penins_T1-4 | -62.6401 | -60.3610 | Total | 26 | 19 | |
| Hurd_Penins_T1-5 | -62.6400 | -60.3609 | Alphaproteobacteria | Total | 1 | 1 |
| Hurd_Penins_T1-5 | -62.6400 | -60.3609 | Alphaproteobacteria | Methylocystis | 1 | |
| Hurd_Penins_T1-5 | -62.6400 | -60.3609 | Betaproteobacteria | Total | 2 | 2 |
| Hurd_Penins_T1-5 | -62.6400 | -60.3609 | Betaproteobacteria | Oxalobacteraceae | 1 | |
| Hurd_Penins_T1-5 | -62.6400 | -60.3609 | Betaproteobacteria | Unclassified Betaproteobacteria | 1 | |
| Hurd_Penins_T1-5 | -62.6400 | -60.3609 | Gammaproteobacteria | Total | 1 | 1 |
| Hurd_Penins_T1-5 | -62.6400 | -60.3609 | Gammaproteobacteria | Methylobacter | 1 | |
| Hurd_Penins_T1-5 | -62.6400 | -60.3609 | Bacteroidetes | Total | 8 | 3 |
| Hurd_Penins_T1-5 | -62.6400 | -60.3609 | Bacteroidetes | Chitinophagaceae | 7 | |
| Hurd_Penins_T1-5 | -62.6400 | -60.3609 | Bacteroidetes | Chitinophaga | 1 | |
| Hurd_Penins_T1-5 | -62.6400 | -60.3609 | Gemmatimonadetes | Total | 2 | 1 |
| Hurd_Penins_T1-5 | -62.6400 | -60.3609 | Gemmatimonadetes | Gemmatimonas | 2 | |
| Hurd_Penins_T1-5 | -62.6400 | -60.3609 | Acidobacteria | Total | 13 | 5 |
| Hurd_Penins_T1-5 | -62.6400 | -60.3609 | Acidobacteria | Group 4 | 12 | |
| Hurd_Penins_T1-5 | -62.6400 | -60.3609 | Acidobacteria | Group 7 | 1 | |
| Hurd_Penins_T1-5 | -62.6400 | -60.3609 | Firmicutes | Total | 9 | 4 |
| Hurd_Penins_T1-5 | -62.6400 | -60.3609 | Firmicutes | Lactobacillus | 4 | |
| Hurd_Penins_T1-5 | -62.6400 | -60.3609 | Firmicutes | Bacillales | 3 | |
| Hurd_Penins_T1-5 | -62.6400 | -60.3609 | Firmicutes | Clostridiaceae | 1 | |
| Hurd_Penins_T1-5 | -62.6400 | -60.3609 | Firmicutes | Unclassified Firmicutes | 1 | |
| Hurd_Penins_T1-5 | -62.6400 | -60.3609 | Chloroflexi | Total | 1 | 1 |
| Hurd_Penins_T1-5 | -62.6400 | -60.3609 | Chloroflexi | Anaerolineaceae | 1 | |
| Hurd_Penins_T1-5 | -62.6400 | -60.3609 | Unclassified bacteria | Total | 4 | 4 |
| Hurd_Penins_T1-5 | -62.6400 | -60.3609 | Total | 41 | 22 | |
| Hurd_Penins_SP-A | -62.6412 | -60.3534 | Alphaproteobacteria | Total | 1 | 1 |
| Hurd_Penins_SP-A | -62.6412 | -60.3534 | Alphaproteobacteria | Rhizobiales | 1 | |
| Hurd_Penins_SP-A | -62.6412 | -60.3534 | Gammaproteobacteria | Total | 4 | 1 |
| Hurd_Penins_SP-A | -62.6412 | -60.3534 | Gammaproteobacteria | Methylobacter | 4 | |
| Hurd_Penins_SP-A | -62.6412 | -60.3534 | Bacteroidetes | Total | 13 | 7 |
| Hurd_Penins_SP-A | -62.6412 | -60.3534 | Bacteroidetes | Chitinophagaceae | 8 | |
| Hurd_Penins_SP-A | -62.6412 | -60.3534 | Bacteroidetes | Ferruginibacter | 3 | |
| Hurd_Penins_SP-A | -62.6412 | -60.3534 | Bacteroidetes | Tannerella | 2 | |
| Hurd_Penins_SP-A | -62.6412 | -60.3534 | Planctomycetes | Total | 2 | 1 |
| Hurd_Penins_SP-A | -62.6412 | -60.3534 | Planctomycetes | Planctomycetaceae | 2 | |
| Hurd_Penins_SP-A | -62.6412 | -60.3534 | Acidobacteria | Total | 2 | 1 |
| Hurd_Penins_SP-A | -62.6412 | -60.3534 | Acidobacteria | Group 4 | 2 | |
| Hurd_Penins_SP-A | -62.6412 | -60.3534 | Firmicutes | Total | 4 | 2 |
| Hurd_Penins_SP-A | -62.6412 | -60.3534 | Firmicutes | Streptococcus | 4 | |
| Hurd_Penins_SP-A | -62.6412 | -60.3534 | Actinobacteria | Total | 5 | 3 |
| Hurd_Penins_SP-A | -62.6412 | -60.3534 | Actinobacteria | Propionibacterium | 3 | |
| Hurd_Penins_SP-A | -62.6412 | -60.3534 | Actinobacteria | Acidimicrobiales | 1 | |
| Hurd_Penins_SP-A | -62.6412 | -60.3534 | Actinobacteria | Unclassified Actinobacteria | 1 | |
| Hurd_Penins_SP-A | -62.6412 | -60.3534 | Unclassified bacteria | Total | 3 | 3 |
| Hurd_Penins_SP-A | -62.6412 | -60.3534 | Total | 34 | 19 | |
| Hurd_Penins_SP-B | -62.6401 | -60.3601 | Betaproteobacteria | Total | 3 | 3 |
| Hurd_Penins_SP-B | -62.6401 | -60.3601 | Betaproteobacteria | Polaromonas | 1 | |
| Hurd_Penins_SP-B | -62.6401 | -60.3601 | Betaproteobacteria | Comamonadaceae | 1 | |
| Hurd_Penins_SP-B | -62.6401 | -60.3601 | Betaproteobacteria | Unclassified Betaproteobacteria | 1 | |
| Hurd_Penins_SP-B | -62.6401 | -60.3601 | Bacteroidetes | Total | 8 | 4 |
| Hurd_Penins_SP-B | -62.6401 | -60.3601 | Bacteroidetes | Chitinophagaceae | 4 | |
| Hurd_Penins_SP-B | -62.6401 | -60.3601 | Bacteroidetes | Unclassified Bacteroidetes | 4 | |
| Hurd_Penins_SP-B | -62.6401 | -60.3601 | Acidobacteria | Total | 9 | 7 |
| Hurd_Penins_SP-B | -62.6401 | -60.3601 | Acidobacteria | Group 4 | 6 | |
| Hurd_Penins_SP-B | -62.6401 | -60.3601 | Acidobacteria | Group 6 | 2 | |
| Hurd_Penins_SP-B | -62.6401 | -60.3601 | Acidobacteria | Group 7 | 1 | |
| Hurd_Penins_SP-B | -62.6401 | -60.3601 | Nitrospirae | Total | 1 | 1 |
| Hurd_Penins_SP-B | -62.6401 | -60.3601 | Nitrospirae | Nitrospiraceae | 1 | |
| Hurd_Penins_SP-B | -62.6401 | -60.3601 | Firmicutes | Total | 7 | 2 |
| Hurd_Penins_SP-B | -62.6401 | -60.3601 | Firmicutes | Staphylococcus | 5 | |
| Hurd_Penins_SP-B | -62.6401 | -60.3601 | Firmicutes | Staphylococcaceae | 1 | |
| Hurd_Penins_SP-B | -62.6401 | -60.3601 | Firmicutes | Unclassified Firmicutes | 1 | |
| Hurd_Penins_SP-B | -62.6401 | -60.3601 | Actinobacteria | Total | 1 | 1 |
| Hurd_Penins_SP-B | -62.6401 | -60.3601 | Actinobacteria | Propionibacterium | 1 | |
| Hurd_Penins_SP-B | -62.6401 | -60.3601 | Chloroflexi | Total | 1 | 1 |
| Hurd_Penins_SP-B | -62.6401 | -60.3601 | Chloroflexi | Anaerolineaceae | 1 | |
| Hurd_Penins_SP-B | -62.6401 | -60.3601 | Unclassified bacteria | Total | 10 | 7 |
| Hurd_Penins_SP-B | -62.6401 | -60.3601 | Total | 40 | 26 | |
| Hurd_Penins_SP-C | -62.6420 | -60.3627 | Betaproteobacteria | Total | 3 | 2 |
| Hurd_Penins_SP-C | -62.6420 | -60.3627 | Betaproteobacteria | Burkholderia | 2 | |
| Hurd_Penins_SP-C | -62.6420 | -60.3627 | Betaproteobacteria | Burkholderiales | 1 | |
| Hurd_Penins_SP-C | -62.6420 | -60.3627 | Bacteroidetes | Total | 2 | 2 |
| Hurd_Penins_SP-C | -62.6420 | -60.3627 | Bacteroidetes | Chitinophagaceae | 2 | |
| Hurd_Penins_SP-C | -62.6420 | -60.3627 | Acidobacteria | Total | 8 | 3 |
| Hurd_Penins_SP-C | -62.6420 | -60.3627 | Acidobacteria | Group 4 | 7 | |
| Hurd_Penins_SP-C | -62.6420 | -60.3627 | Acidobacteria | Group 13 | 1 | |
| Hurd_Penins_SP-C | -62.6420 | -60.3627 | Actinobacteria | Total | 1 | 1 |
| Hurd_Penins_SP-C | -62.6420 | -60.3627 | Actinobacteria | Propionibacterium | 1 | |
| Hurd_Penins_SP-C | -62.6420 | -60.3627 | Unclassified bacteria | Total | 1 | 1 |
| Hurd_Penins_SP-C | -62.6420 | -60.3627 | Total | 15 | 9 | |
| Hurd_Penins_SP-D | -62.6445 | -60.3533 | Bacteroidetes | Total | 1 | 1 |
| Hurd_Penins_SP-D | -62.6445 | -60.3533 | Bacteroidetes | Chitinophagaceae | 1 | |
| Hurd_Penins_SP-D | -62.6445 | -60.3533 | Gemmatimonadetes | Total | 1 | 1 |
| Hurd_Penins_SP-D | -62.6445 | -60.3533 | Gemmatimonadetes | Gemmatimonas | 1 | |
| Hurd_Penins_SP-D | -62.6445 | -60.3533 | Acidobacteria | Total | 24 | 7 |
| Hurd_Penins_SP-D | -62.6445 | -60.3533 | Acidobacteria | Group 4 | 24 | |
| Hurd_Penins_SP-D | -62.6445 | -60.3533 | Unclassified bacteria | Total | 1 | 1 |
| Hurd_Penins_SP-D | -62.6445 | -60.3533 | Total | 27 | 10 |