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Clements, Jeff C; Hunt, Heather L (2014): Influence of sediment acidification and water flow on sediment acceptance and dispersal of juvenile soft-shell clams (Mya arenaria L.) [dataset]. PANGAEA, https://doi.org/10.1594/PANGAEA.833881, Supplement to: Clements, JC; Hunt, HL (2014): Influence of sediment acidification and water flow on sediment acceptance and dispersal of juvenile soft-shell clams (Mya arenaria L.). Journal of Experimental Marine Biology and Ecology, 453, 62-69, https://doi.org/10.1016/j.jembe.2014.01.002

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Abstract:
Although ocean acidification is expected to reduce carbonate saturation and yield negative impacts on open-ocean calcifying organisms in the near future, acidification in coastal ecosystems may already be affecting these organisms. Few studies have addressed the effects of sedimentary saturation state on benthic invertebrates. Here, we investigate whether sedimentary aragonite saturation (Omega aragonite) and proton concentration ([H+]) affect burrowing and dispersal rates of juvenile soft-shell clams (Mya arenaria) in a laboratory flume experiment. Two size classes of juvenile clams (0.5-1.5 mm and 1.51-2.5 mm) were subjected to a range of sediment Omega aragonite and [H+] conditions within the range of typical estuarine sediments (Omega aragonite 0.21-1.87; pH 6.8-7.8; [H+] 1.58 × 10**-8-1.51 × 10**- 7) by the addition of varying amounts of CO2, while overlying water pH was kept constant ~ 7.8 (Omega aragonite ~ 1.97). There was a significant positive relationship between the percent of juvenile clams burrowed in still water and Omega aragonite and a significant negative relationship between burrowing and [H+]. Clams were subsequently exposed to one of two different flow conditions (flume; 11 cm/s and 23 cm/s) and there was a significant negative relationship between Omega aragonite and dispersal, regardless of clam size class and flow speed. No apparent relationship was evident between dispersal and [H+]. The results of this study suggest that sediment acidification may play an important role in soft-shell clam recruitment and dispersal. When assessing the impacts of open-ocean and coastal acidification on infaunal organisms, future studies should address the effects of sediment acidification to adequately understand how calcifying organisms may be affected by shifting pH conditions.
Keyword(s):
Animalia; Benthic animals; Benthos; Coast and continental shelf; Laboratory experiment; Mesocosm or benthocosm; Mollusca; Mya arenaria; North Atlantic; Reproduction; Single species; Temperate
Further details:
Lavigne, Héloïse; Epitalon, Jean-Marie; Gattuso, Jean-Pierre (2014): seacarb: seawater carbonate chemistry with R. R package version 3.0. https://cran.r-project.org/package=seacarb
Coverage:
Latitude: 45.124670 * Longitude: -66.471660
Event(s):
Little_Lepreau * Latitude: 45.124670 * Longitude: -66.471660 * Method/Device: Experiment (EXP)
Comment:
In order to allow full comparability with other ocean acidification data sets, the R package seacarb (Lavigne et al, 2014) was used to compute a complete and consistent set of carbonate system variables, as described by Nisumaa et al. (2010). In this dataset the original values were archived in addition with the recalculated parameters (see related PI). The date of carbonate chemistry calculation is 2014-07-08.
Parameter(s):
#NameShort NameUnitPrincipal InvestigatorMethod/DeviceComment
SpeciesSpeciesClements, Jeff C
pHpHClements, Jeff CPotentiometricNBS scale
Temperature, waterTemp°CClements, Jeff C
SalinitySalClements, Jeff C
Alkalinity, totalATµmol/kgClements, Jeff CPotentiometric titration
Aragonite saturation stateOmega ArgClements, Jeff CCalculated using CO2SYS
SizeSizeClements, Jeff Cclam size class (mm)
Flow speedFlow speedm/sClements, Jeff C
PercentagePerc%Clements, Jeff Cclams burrowed
10 PercentagePerc%Clements, Jeff Cclams dispersed
11 Carbonate system computation flagCSC flagYang, YanCalculated using seacarb after Nisumaa et al. (2010)
12 pHpHYang, YanCalculated using seacarb after Nisumaa et al. (2010)total scale
13 Carbon dioxideCO2µmol/kgYang, YanCalculated using seacarb after Nisumaa et al. (2010)
14 Partial pressure of carbon dioxide (water) at sea surface temperature (wet air)pCO2water_SST_wetµatmYang, YanCalculated using seacarb after Nisumaa et al. (2010)
15 Fugacity of carbon dioxide (water) at sea surface temperature (wet air)fCO2water_SST_wetµatmYang, YanCalculated using seacarb after Nisumaa et al. (2010)
16 Bicarbonate ion[HCO3]-µmol/kgYang, YanCalculated using seacarb after Nisumaa et al. (2010)
17 Carbonate ion[CO3]2-µmol/kgYang, YanCalculated using seacarb after Nisumaa et al. (2010)
18 Carbon, inorganic, dissolvedDICµmol/kgYang, YanCalculated using seacarb after Nisumaa et al. (2010)
19 Aragonite saturation stateOmega ArgYang, YanCalculated using seacarb after Nisumaa et al. (2010)
20 Calcite saturation stateOmega CalYang, YanCalculated using seacarb after Nisumaa et al. (2010)
Status:
Curation Level: Enhanced curation (CurationLevelC)
Size:
800 data points

Data

Download dataset as tab-delimited text — use the following character encoding:


Species

pH
(NBS scale, Potentiometric)

Temp [°C]

Sal

AT [µmol/kg]
(Potentiometric titration)

Omega Arg
(Calculated using CO2SYS)

Size
(clam size class (mm))

Flow speed [m/s]

Perc [%]
(clams burrowed)
10 
Perc [%]
(clams dispersed)
11 
CSC flag
(Calculated using seacarb afte...)
12 
pH
(total scale, Calculated using...)
13 
CO2 [µmol/kg]
(Calculated using seacarb afte...)
14 
pCO2water_SST_wet [µatm]
(Calculated using seacarb afte...)
15 
fCO2water_SST_wet [µatm]
(Calculated using seacarb afte...)
16 
[HCO3]- [µmol/kg]
(Calculated using seacarb afte...)
17 
[CO3]2- [µmol/kg]
(Calculated using seacarb afte...)
18 
DIC [µmol/kg]
(Calculated using seacarb afte...)
19 
Omega Arg
(Calculated using seacarb afte...)
20 
Omega Cal
(Calculated using seacarb afte...)
Mya arenaria (mollusk)7.4817.532.63379.971.020.5-1.50.1126.7267.361203411339932485734250.891.39
Mya arenaria (mollusk)6.9417.632.83403.510.281.6-2.50.1140.0266.82429122551221333641738100.270.42
Mya arenaria (mollusk)7.3017.632.53324.920.651.6-2.50.2350.0267.181815158514032383834560.590.91
Mya arenaria (mollusk)7.6417.632.53338.131.480.5-1.50.1116.7267.52802294228631538033141.251.95
Mya arenaria (mollusk)7.0817.632.53427.600.391.6-2.50.2353.3266.963138921889033732437100.370.57
Mya arenaria (mollusk)7.7617.632.43211.011.870.5-1.50.2326.7267.645816451639298010031371.562.42
Mya arenaria (mollusk)7.2017.632.43416.450.520.5-1.50.2360.0267.082356716669233463136120.480.75
Mya arenaria (mollusk)7.3017.532.53315.200.640.5-1.50.1116.7267.181815137512032293734470.580.91
Mya arenaria (mollusk)7.4817.532.43461.371.041.6-2.50.116.7267.361233499348733285835090.911.41
Mya arenaria (mollusk)7.1317.632.43217.450.421.6-2.50.2360.0267.012617453742731602534460.390.60
Mya arenaria (mollusk)7.8017.632.52725.891.730.5-1.50.2360.0267.68441261125725079226431.442.24
Mya arenaria (mollusk)7.1817.632.43430.610.500.5-1.50.110.0267.062487068704333633036400.460.72
Mya arenaria (mollusk)7.2317.532.42693.000.441.6-2.50.2383.3267.111734923490626312628300.400.63
Mya arenaria (mollusk)7.4517.632.53407.570.960.5-1.50.2373.3267.331303702368932835434670.841.31
Mya arenaria (mollusk)6.9417.532.43367.030.280.5-1.50.1113.3266.82427121471210533291737720.260.41
Mya arenaria (mollusk)7.3717.632.32821.290.651.6-2.50.113.3267.251303711369827343729010.580.90
Mya arenaria (mollusk)7.5317.732.22617.650.891.6-2.50.1113.3267.41822352234325004926320.771.20
Mya arenaria (mollusk)6.9717.332.53267.680.291.6-2.50.2383.3266.85387109591092132281736320.270.42
Mya arenaria (mollusk)7.5217.332.53246.251.070.5-1.50.2373.3267.401052972296231095932730.931.44
Mya arenaria (mollusk)6.8817.632.43610.010.261.6-2.50.2340.0266.76526149931494235741641160.250.38
Mya arenaria (mollusk)7.4717.632.33083.240.910.5-1.50.1163.33.3267.351123197318629655131280.791.23
Mya arenaria (mollusk)7.1717.632.43305.850.470.5-1.50.1130.00.0267.052446972694832422835140.430.68
Mya arenaria (mollusk)7.3917.732.53101.590.761.6-2.50.1143.310.0267.271363890387630014331800.671.05
Mya arenaria (mollusk)7.7117.632.53466.651.811.6-2.50.2370.043.3267.59702008200132449734111.512.35
Mya arenaria (mollusk)7.1417.632.43203.900.420.5-1.50.2336.780.0267.022547249722431452534250.390.61
Mya arenaria (mollusk)7.1517.532.33290.000.440.5-1.50.1143.310.0267.032567270724532292635110.410.64
Mya arenaria (mollusk)6.9717.532.33438.730.301.6-2.50.2356.740.0266.85407115761153733971838220.290.44
Mya arenaria (mollusk)6.9317.532.32876.030.231.6-2.50.1133.33.3266.81374106251058828431432310.220.34
Mya arenaria (mollusk)7.3817.732.33220.080.760.5-1.50.2346.740.0267.261454143412831194333080.681.06
Mya arenaria (mollusk)7.5117.732.33067.281.001.6-2.50.2360.046.7267.391012892288229385530950.861.34
Mya arenaria (mollusk)7.7417.632.43272.781.820.5-1.50.1160.03.3267.62621762175630479732071.522.37
Mya arenaria (mollusk)7.1317.632.43471.200.450.5-1.50.1140.060.0267.012828042801534102737190.420.65
Mya arenaria (mollusk)7.3517.632.33165.880.691.6-2.50.1133.336.7267.231534369435430734032660.620.97
Mya arenaria (mollusk)6.8217.732.33415.440.210.5-1.50.1136.726.7266.70572163381628133861339700.200.32
Mya arenaria (mollusk)7.1317.732.33299.420.431.6-2.50.2326.773.3267.012687657763132412535340.400.62
Mya arenaria (mollusk)7.6317.632.23481.151.500.5-1.50.2350.016.7267.51862458245032958134621.271.98
Mya arenaria (mollusk)6.9717.632.22636.190.230.5-1.50.2346.763.3266.853128886885626031429290.220.34
Mya arenaria (mollusk)7.6217.632.23456.211.651.6-2.50.1160.010.0267.50882500249232757934421.231.92
Mya arenaria (mollusk)7.5117.632.33464.481.121.6-2.50.2360.056.7267.391153266325433216234980.971.51
Mya arenaria (mollusk)7.2417.532.33463.020.580.5-1.50.2336.770.0267.122186194617233853436370.530.83
Mya arenaria (mollusk)7.6017.432.33276.861.491.6-2.50.1146.713.3267.48882480247231127132711.111.73