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Allison, Nicola; Cohen, Itay; Finch, Adrian A; Erez, Jonathan; EMIF (2011): Seawater carbonate chemistry, Mg/Ca, Sr/Ca, oxygen production and calcification rate during experiments with coral Pocillopora damicornis, 2011 [dataset]. PANGAEA, https://doi.org/10.1594/PANGAEA.774781, Supplement to: Allison, N et al. (2011): Controls on Sr/Ca and Mg/Ca in scleractinian corals: The effects of Ca-ATPase and transcellular Ca channels on skeletal chemistry. Geochimica et Cosmochimica Acta, 75(21), 6350-6360, https://doi.org/10.1016/j.gca.2011.08.012

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Abstract:
The Sr/Ca of aragonitic coral skeletons is a commonly used palaeothermometer. However skeletal Sr/Ca is typically dominated by weekly-monthly oscillations which do not reflect temperature or seawater composition and the origins of which are currently unknown. To test the impact of transcellular Ca2+ transport processes on skeletal Sr/Ca, colonies of the branching coral, Pocillopora damicornis, were cultured in the presence of inhibitors of Ca-ATPase (ruthenium red) and Ca channels (verapamil hydrochloride). The photosynthesis, respiration and calcification rates of the colonies were monitored throughout the experiment. The skeleton deposited in the presence of the inhibitors was identified (by 42Ca spike) and analysed for Sr/Ca and Mg/Ca by secondary ion mass spectrometry. The Sr/Ca of the aragonite deposited in the presence of either of the inhibitors was not significantly different from that of the solvent (dimethyl sulfoxide) control, although the coral calcification rate was reduced by up to 66% and 73% in the ruthenium red and verapamil treatments, respectively. The typical precision (95% confidence limits) of mean Sr/Ca determinations within any treatment was <±1% and differences in skeletal Sr/Ca between treatments were correspondingly small. Either Ca-ATPase and Ca channels transport Sr2+ and Ca2+ in virtually the same ratio in which they are present in seawater or transcellular processes contribute little Ca2+ to the skeleton and most Ca is derived from seawater transported directly to the calcification site. Variations in the activities of Ca-ATPase and Ca-channels are not responsible for the weekly-monthly Sr/Ca oscillations observed in skeletal chronologies, assuming that the specificities of Ca transcellular transport processes are similar between coral genera.
Keyword(s):
Animalia; Benthic animals; Benthos; Biomass/Abundance/Elemental composition; Bottles or small containers/Aquaria (<20 L); Calcification/Dissolution; Cnidaria; Coast and continental shelf; Laboratory experiment; Pocillopora damicornis; Primary production/Photosynthesis; Red Sea; Single species; Temperate
Funding:
Seventh Framework Programme (FP7), grant/award no. 211384: European Project on Ocean Acidification
Sixth Framework Programme (FP6), grant/award no. 511106: European network of excellence for Ocean Ecosystems Analysis
Comment:
In order to allow full comparability with other ocean acidification data sets, the R package seacarb (Lavigne and Gattuso, 2011) was used to compute a complete and consistent set of carbonate system variables, as described by Nisumaa et al. (2010). In this dataset the original values were archived in addition with the recalculated parameters (see related PI).
Parameter(s):
#NameShort NameUnitPrincipal InvestigatorMethod/DeviceComment
1Experimental treatmentExp treatAllison, Nicola
2IdentificationIDAllison, Nicola
3ReplicatesRepl#Allison, Nicola
4SalinitySalAllison, Nicola
5Temperature, waterTemp°CAllison, Nicola
6pHpHAllison, NicolaMeasuredNBS scale
7pH, standard deviationpH std dev±Allison, Nicola
8Alkalinity, totalATµmol/kgAllison, NicolaAlkalinity, Gran titration (Gran, 1950)
9Alkalinity, total, standard deviationAT std dev±Allison, Nicola
10OxygenO2µmol/lAllison, NicolaTitration, Winkler
11Oxygen, standard deviationO2 std dev±Allison, Nicola
12Magnesium/Calcium ratioMg/CaAllison, NicolaICP-MS, Thermo Scientific, XSeries 2
13Magnesium/Calcium ratio, standard deviationMg/Ca std dev±Allison, Nicola
14Strontium/Calcium ratioSr/Cammol/molAllison, NicolaICP-MS, Thermo Scientific, XSeries 2
15Strontium/Calcium ratio, standard deviationSr/Ca std dev±Allison, Nicola
16Sample IDSample IDAllison, Nicola
17Oxygen production rateO2 prodµmol/hAllison, NicolaCalculated, see reference(s)
18Net calcification rate of calcium carbonateNC CaCO3µmol/nubbin/hAllison, NicolaCalculated, see reference(s)
19Carbonate system computation flagCSC flagNisumaa, Anne-MarinCalculated using seacarb after Nisumaa et al. (2010)
20pHpHNisumaa, Anne-MarinCalculated using seacarb after Nisumaa et al. (2010)Total scale
21Carbon dioxideCO2µmol/kgNisumaa, Anne-MarinCalculated using seacarb after Nisumaa et al. (2010)
22Partial pressure of carbon dioxide (water) at sea surface temperature (wet air)pCO2water_SST_wetµatmNisumaa, Anne-MarinCalculated using seacarb after Nisumaa et al. (2010)
23Fugacity of carbon dioxide (water) at sea surface temperature (wet air)fCO2water_SST_wetµatmNisumaa, Anne-MarinCalculated using seacarb after Nisumaa et al. (2010)
24Bicarbonate ion[HCO3]-µmol/kgNisumaa, Anne-MarinCalculated using seacarb after Nisumaa et al. (2010)
25Carbonate ion[CO3]2-µmol/kgNisumaa, Anne-MarinCalculated using seacarb after Nisumaa et al. (2010)
26Carbon, inorganic, dissolvedDICµmol/kgNisumaa, Anne-MarinCalculated using seacarb after Nisumaa et al. (2010)
27Aragonite saturation stateOmega ArgNisumaa, Anne-MarinCalculated using seacarb after Nisumaa et al. (2010)
28Calcite saturation stateOmega CalNisumaa, Anne-MarinCalculated using seacarb after Nisumaa et al. (2010)
Status:
Curation Level: Enhanced curation (CurationLevelC)
Size:
1204 data points

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