Not logged in
PANGAEA.
Data Publisher for Earth & Environmental Science

Ihnken, Sven; Roberts, Simon; Beardall, John (2011): Seawater carbonate chemistry, growth rate and light sensitivity of marine diatom Chaetoceros muelleri (strain CSIRO CS-176) during experiments, 2011 [dataset]. PANGAEA, https://doi.org/10.1594/PANGAEA.769749, Supplement to: Ihnken, S et al. (2011): Differential responses of growth and photosynthesis in the marine diatom Chaetoceros muelleri to CO2 and light availability. Phycologia, 50(2), 182-193, https://doi.org/10.2216/10-11.1

Always quote citation above when using data! You can download the citation in several formats below.

RIS CitationBibTeX Citation

Abstract:
This study investigated the impact of photon flux and elevated CO2 concentrations on growth and photosynthetic electron transport on the marine diatom Chaetoceros muelleri and looked for evidence for the presence of a CO2-concentrating mechanism (CCM). pH drift experiments clearly showed that C. muelleri has the capacity to use bicarbonate to acquire inorganic carbon through one or multiple CCMs. The final pH achieved in unbuffered cultures was not changed by light intensity, even under very low photon flux, implying a low energy demand of bicarbonate use via a CCM. In short-term pH drift experiments, only treatment with the carbonic anhydrase inhibitor ethoxyzolamide (EZ) slowed down the rise in pH considerably. EZ was also the only inhibitor that altered the final pH attained, although marginally. In growth experiments, CO2 availability was manipulated by changing the pH in closed flasks at a fixed dissolved inorganic carbon (DIC) concentration. Low-light-treated samples showed lower growth rates in elevated CO2conditions. No CO2 effect was recorded under high light exposure. The maximal photosynthetic capacity, however, increased with CO2 concentration in saturating, but not in subsaturating, light intensities. Growth and photosynthetic capacity therefore responded in opposite ways to increasing CO2 availability. The capacity to photoacclimate to high and low photon flux appeared not to be affected by CO2treatments. However, photoacclimation was restricted to growth photon fluxes between 30 and 300 µmol photons m-2 s-1. The light saturation points for photosynthetic electron transport and for growth coincided at 100 µmol photons m-2 s-1. Below 100 µmol photons m-2 s-1 the light saturation point for photosynthesis was higher than the growth photon flux (i.e. photosynthesis was not light saturated under growth conditions), whereas at higher growth photon flux, photosynthesis was saturated below growth light levels.
Keyword(s):
Bottles or small containers/Aquaria (<20 L); Chaetoceros muelleri; Chromista; Growth/Morphology; Laboratory experiment; Laboratory strains; Light; Ochrophyta; Pelagos; Phytoplankton; Primary production/Photosynthesis; Single species; South Pacific
Funding:
Seventh Framework Programme (FP7), grant/award no. 211384: European Project on Ocean Acidification
Sixth Framework Programme (FP6), grant/award no. 511106: European network of excellence for Ocean Ecosystems Analysis
Comment:
In order to allow full comparability with other ocean acidification data sets, the R package seacarb (Lavigne and Gattuso, 2011) was used to compute a complete and consistent set of carbonate system variables, as described by Nisumaa et al. (2010). In this dataset the original values were archived in addition with the recalculated parameters (see related PI).
Parameter(s):
#NameShort NameUnitPrincipal InvestigatorMethod/DeviceComment
1Experimental treatmentExp treatIhnken, Sven
2IdentificationIDIhnken, Sven
3Radiation, photosynthetically activePARµmol/m2/sIhnken, Sven
4SalinitySalIhnken, Sven
5Temperature, waterTemp°CIhnken, Sven
6pHpHIhnken, SvenpH meter (Metrohm electrodes)NBS scale; H+ ion concentration in µmol/l
7Carbon, inorganic, dissolvedDICµmol/lIhnken, Sven
8Carbon, inorganic, dissolvedDICµmol/kgIhnken, SvenCalculatedNBS scale; H+ ion concentration in µmol/kg
9pHpHIhnken, SvenCalculated
10Alkalinity, totalATµmol/kgIhnken, SvenCalculated using CO2SYS
11Growth rateµ#/dayIhnken, SvenSpectrofluorometryLow photon flux
12Growth rate, standard deviationµ std dev±Ihnken, SvenLow photon flux
13Growth rateµ#/dayIhnken, SvenSpectrofluorometryHigh photon flux
14Growth rate, standard deviationµ std dev±Ihnken, SvenHigh photon flux
15Light saturation pointIkIhnken, Sven
16Light saturation point, standard deviationIk std dev±Ihnken, Sven
17Maximal electron transport rate, relativerETR maxIhnken, Sven
18Maximal electron transport rate, relative, standard deviationrETR max std dev±Ihnken, Sven
19Light capturing capacityalphaIhnken, Sven
20Light capturing capacity, standard devitationalpha std dev±Ihnken, Sven
21Carbonate system computation flagCSC flagNisumaa, Anne-MarinCalculated using seacarb after Nisumaa et al. (2010)
22pHpHNisumaa, Anne-MarinCalculated using seacarb after Nisumaa et al. (2010)Total scale; H+ ion concentration in µmol/kg
23Carbon dioxideCO2µmol/kgNisumaa, Anne-MarinCalculated using seacarb after Nisumaa et al. (2010)
24Partial pressure of carbon dioxide (water) at sea surface temperature (wet air)pCO2water_SST_wetµatmNisumaa, Anne-MarinCalculated using seacarb after Nisumaa et al. (2010)
25Fugacity of carbon dioxide (water) at sea surface temperature (wet air)fCO2water_SST_wetµatmNisumaa, Anne-MarinCalculated using seacarb after Nisumaa et al. (2010)
26Bicarbonate ion[HCO3]-µmol/kgNisumaa, Anne-MarinCalculated using seacarb after Nisumaa et al. (2010)
27Carbonate ion[CO3]2-µmol/kgNisumaa, Anne-MarinCalculated using seacarb after Nisumaa et al. (2010)
28Aragonite saturation stateOmega ArgNisumaa, Anne-MarinCalculated using seacarb after Nisumaa et al. (2010)
29Calcite saturation stateOmega CalNisumaa, Anne-MarinCalculated using seacarb after Nisumaa et al. (2010)
Status:
Curation Level: Enhanced curation (CurationLevelC)
Size:
981 data points

Download Data

Download dataset as tab-delimited text — use the following character encoding:

View dataset as HTML