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Pane, Eric F; Barry, J P (2007): Seawater carbonate chemistry and processes during experiments with crabs Chionoecetes tanneri and Cancer magister, 2007 [dataset]. PANGAEA, https://doi.org/10.1594/PANGAEA.721883, Supplement to: Pane, EF; Barry, JP (2007): Extracellular acid–base regulation during short-term hypercapnia is effective in a shallow-water crab, but ineffective in a deep-sea crab. Marine Ecology Progress Series, 334, 1-9, https://doi.org/10.3354/meps334001

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Abstract:
Rising levels of atmospheric carbon dioxide could be curbed by large-scale sequestration of CO2 in the deep sea. Such a solution requires prior assessment of the impact of hypercapnic, acidic seawater on deep-sea fauna. Laboratory studies were conducted to assess the short-term hypercapnic tolerance of the deep-sea Tanner crab Chionoecetes tanneri, collected from 1000 m depth in Monterey Canyon off the coast of central California, USA. Hemolymph acid- base parameters were monitored over 24 h of exposure to seawater equilibrated with ~1% CO2 (seawater PCO2 ~6 torr or 0.8 kPa, pH 7.1), and compared with those of the shallow-living Dungeness crab Cancer magister. Short-term hypercapnia-induced acidosis in the hemolymph of Chionoecetes tanneri was almost uncompensated, with a net 24 h pH reduction of 0.32 units and a net bicarbonate accumulation of only 3 mM. Under simultaneous hypercapnia and hypoxia, short-term extracellular acidosis in Chionoecetes tanneri was completely uncompensated. In contrast, Cancer magister fully recovered its hemolymph pH over 24 h of hypercapnic exposure by net accumulation of 12 mM bicarbonate from the surrounding medium. The data support the hypothesis that deep-sea animals, which are adapted to a stable environment and exhibit reduced metabolic rates, lack the short-term acid-base regulatory capacity to cope with the acute hypercapnic stress that would accompany large-scale CO2 sequestration. Additionally, the data indicate that sequestration in oxygen-poor areas of the ocean would be even more detrimental to deep-sea fauna.
Keyword(s):
Acid-base regulation; Animalia; Arthropoda; Benthic animals; Benthos; Cancer magister; Chionoecetes tanneri; Coast and continental shelf; Containers and aquaria (20-1000 L or < 1 m**2); Deep-sea; Laboratory experiment; North Pacific; Single species; Temperate
Funding:
German Research Foundation (DFG), grant/award no. 5472008: Priority Programme 1158 Antarctic Research with Comparable Investigations in Arctic Sea Ice Areas
Seventh Framework Programme (FP7), grant/award no. 211384: European Project on Ocean Acidification
Sixth Framework Programme (FP6), grant/award no. 511106: European network of excellence for Ocean Ecosystems Analysis
Event(s):
PB_07 * Method/Device: Experiment (EXP)
Comment:
In order to allow full comparability with other ocean acidification data sets, the R package seacarb (Lavigne and Gattuso, 2011) was used to compute a complete and consistent set of carbonate system variables, as described by Nisumaa et al. (2010). In this dataset the original values were archived in addition with the recalculated parameters (see related PI).
Parameter(s):
#NameShort NameUnitPrincipal InvestigatorMethod/DeviceComment
Experimental treatmentExp treatPane, Eric F
SpeciesSpeciesPane, Eric F
Time in minutesTimeminPane, Eric F
Temperature, waterTemp°CPane, Eric F
SalinitySalPane, Eric F
Carbonate system computation flagCSC flagNisumaa, Anne-MarinCalculated using seacarb after Nisumaa et al. (2010)
pHpHPane, Eric FpH, ElectrodeNBS scale
pHpHNisumaa, Anne-MarinCalculated using seacarb after Nisumaa et al. (2010)Total scale
Alkalinity, totalATµmol/kgPane, Eric FCalculated using CO2SYS
10 Carbon, inorganic, dissolvedDICµmol/lPane, Eric FInfrared gas analyzer, IRGA Li-Cor1 6262
11 Carbon, inorganic, dissolvedDICµmol/kgPane, Eric FCalculatedOriginal data in µmol/l, calculated using density
12 Carbon dioxideCO2µmol/kgNisumaa, Anne-MarinCalculated using seacarb after Nisumaa et al. (2010)
13 Bicarbonate ion[HCO3]-µmol/kgNisumaa, Anne-MarinCalculated using seacarb after Nisumaa et al. (2010)
14 Carbonate ion[CO3]2-µmol/kgNisumaa, Anne-MarinCalculated using seacarb after Nisumaa et al. (2010)
15 Partial pressure of carbon dioxide (water) at sea surface temperature (wet air)pCO2water_SST_wetµatmNisumaa, Anne-MarinCalculated using seacarb after Nisumaa et al. (2010)
16 Fugacity of carbon dioxide (water) at sea surface temperature (wet air)fCO2water_SST_wetµatmNisumaa, Anne-MarinCalculated using seacarb after Nisumaa et al. (2010)
17 Aragonite saturation stateOmega ArgNisumaa, Anne-MarinCalculated using seacarb after Nisumaa et al. (2010)
18 Calcite saturation stateOmega CalNisumaa, Anne-MarinCalculated using seacarb after Nisumaa et al. (2010)
19 Carbon dioxide solubilityCO2 solubPane, Eric F
20 Apparent pKpKPane, Eric F
21 Haemolymph, carbon dioxide tensionPCO2 (ha)TorrPane, Eric FCalculated
Status:
Curation Level: Enhanced curation (CurationLevelC)
Size:
2494 data points

Data

Download dataset as tab-delimited text — use the following character encoding:


Exp treat

Species

Time [min]

Temp [°C]

Sal

CSC flag
(Calculated using seacarb afte...)

pH
(NBS scale, pH, Electrode)

pH
(Total scale, Calculated using...)

AT [µmol/kg]
(Calculated using CO2SYS)
10 
DIC [µmol/l]
(Infrared gas analyzer, IRGA L...)
11 
DIC [µmol/kg]
(Original data in µmol/l, calc...)
12 
CO2 [µmol/kg]
(Calculated using seacarb afte...)
13 
[HCO3]- [µmol/kg]
(Calculated using seacarb afte...)
14 
[CO3]2- [µmol/kg]
(Calculated using seacarb afte...)
15 
pCO2water_SST_wet [µatm]
(Calculated using seacarb afte...)
16 
fCO2water_SST_wet [µatm]
(Calculated using seacarb afte...)
17 
Omega Arg
(Calculated using seacarb afte...)
18 
Omega Cal
(Calculated using seacarb afte...)
19 
CO2 solub
20 
pK
21 
PCO2 (ha) [Torr]
(Calculated)
CM_1Cancer magister01034277.977.666932.17042.316862.7140.506541.45180.753195.763183.622.754.330.058836.0941.576
CM_1Cancer magister251034277.647.349451.79982.979728.4412.679194.13121.579386.469350.791.852.910.058836.1224.973
CM_1Cancer magister501034277.497.1910349.211172.4210887.5643.5610148.9494.9814637.9614582.341.442.280.058836.1368.072
CM_1Cancer magister751034277.497.1912428.713419.5113077.3772.9512190.22114.1017581.0417514.241.742.730.058836.1369.682
CM_1Cancer magister1501034277.457.1514015.715234.7714846.2957.4713771.21117.5521778.1421695.391.792.820.058836.13911.962
CM_1Cancer magister25510347.44
CM_1Cancer magister14401034277.627.3222290.723626.2723023.71021.1921728.16274.3723227.5523139.284.176.570.058836.12412.321
CM_2Cancer magister01034277.897.585900.26045.835891.6145.065617.48129.103299.563287.021.963.090.058836.1001.628
CM_2Cancer magister2510347.56
CM_2Cancer magister5010347.46
CM_2Cancer magister7510347.44
CM_2Cancer magister15010347.48
CM_2Cancer magister2551034277.467.1619959.021662.8121110.31332.2019606.88171.2630301.4330186.292.604.100.058836.13816.800
CM_2Cancer magister14401034277.747.4318623.219466.1518969.7657.3018019.23293.1614950.5414893.734.467.020.058836.1147.614
CM_3Cancer magister01034277.797.485696.55905.485754.9178.055476.8499.984049.924034.531.522.390.058836.1102.064
CM_3Cancer magister251034277.477.174459.94824.344701.3290.314371.9239.076603.146578.050.590.940.058836.1373.631
CM_3Cancer magister501034277.417.113828.34183.944077.2286.783761.1829.276523.036498.250.450.700.058836.1433.668
CM_3Cancer magister751034277.427.124990.75447.155308.2365.364903.8139.068310.298278.710.590.940.058836.1424.679
CM_3Cancer magister1501034277.447.146713.47304.737118.4469.216594.2255.0010672.3910631.840.841.320.058836.1405.945
CM_3Cancer magister2551034277.477.178121.58793.828569.5529.117969.2071.2312034.7711989.041.081.710.058836.1386.674
CM_3Cancer magister14401034277.807.4923154.724039.4123426.3708.4222301.26416.6516113.2316052.006.349.980.058836.1098.137
CM_4Cancer magister01034277.647.335109.25396.695259.0228.144966.7464.175189.115169.400.981.540.058836.1232.729
CM_4Cancer magister251034277.357.055903.06531.906365.3509.205816.6739.4311582.0911538.080.600.940.058836.1486.564
CM_4Cancer magister501034277.286.995952.76672.296502.1590.615876.8034.7013433.7813382.740.530.830.058836.1547.874
CM_4Cancer magister751034277.307.006872.17686.737490.7666.226783.4840.9915153.5715095.990.620.980.058836.1538.721
CM_4Cancer magister1501034277.327.0211899.013257.3112919.21101.4711743.4374.3125053.3424958.141.131.780.058836.15114.251
CM_4Cancer magister2551034277.527.2213874.714911.9714531.7804.2913591.08136.3018293.8618224.352.073.270.058836.1339.928
CM_4Cancer magister14401034277.657.3412215.612906.6412577.5533.4911886.80157.1812134.4812088.372.393.770.058836.1226.336
CM_5Cancer magister01034277.847.537441.17675.427479.7206.537127.17145.974697.574679.722.223.500.058836.1052.334
CM_5Cancer magister251034277.517.216267.06739.606567.7371.616135.9760.138452.378420.250.911.440.058836.1344.650
CM_5Cancer magister501034277.477.178000.78662.888441.9521.247850.5370.1711855.9211810.871.071.680.058836.1376.477
CM_5Cancer magister751034277.407.108905.79763.439514.4683.768763.9966.6715552.4415493.351.011.600.058836.1438.650
CM_5Cancer magister1501034277.547.2310468.711231.2710944.8592.5710247.11105.1613478.3113427.101.602.520.058836.1327.256
CM_5Cancer magister2551034277.647.349501.010035.179779.2414.879242.18122.199436.349400.491.862.930.058836.1235.023
CM_5Cancer magister14401034277.857.5415615.416113.8515702.9423.6914965.49313.729636.969600.344.777.510.058836.1044.790
CM_6Cancer magister01034277.917.607524.47699.397503.0176.437154.42172.184012.913997.662.624.120.058836.0991.980
CM_6Cancer magister251034277.527.225261.55647.465503.4304.575147.2351.626927.636901.300.791.240.058836.1333.777
CM_6Cancer magister501034277.457.158150.58855.128629.3556.518004.4568.3312658.0812609.981.041.640.058836.1407.079
CM_6Cancer magister751034277.427.127682.38390.128176.1562.777553.2160.1612800.5012751.870.921.440.058836.1427.207
CM_6Cancer magister1501034277.617.309988.010607.3010336.8479.409739.93117.4410904.2810862.851.792.810.058836.1265.786
CM_6Cancer magister2551034277.727.4213188.313796.5013444.6476.5312765.17202.9410838.9510797.763.094.860.058836.1155.627
CM_6Cancer magister14401034277.847.5314474.614951.7814570.5402.2513883.82284.409149.349114.574.336.810.058836.1054.544
CT_1_high_O2Chionoecetes tanneri0434277.937.636169.16364.446196.9165.465915.87115.553000.002987.591.752.770.079596.1681.374
CT_1_high_O2Chionoecetes tanneri254347.65
CT_1_high_O2Chionoecetes tanneri50434277.547.255048.25474.635330.5332.204957.8740.426023.175998.250.610.970.079596.1922.970
CT_1_high_O2Chionoecetes tanneri75434277.527.234919.85353.275212.3339.254835.4337.656150.956125.490.570.900.079596.1933.008
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CT_1_high_O2Chionoecetes tanneri255434277.377.096138.46865.466684.7587.086063.4134.2110644.4710600.420.520.820.079596.2035.480
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CT_2_high_O2Chionoecetes tanneri0434278.007.6911221.211520.1211216.8261.0810715.49240.254733.774714.183.635.770.079596.1632.101
CT_2_high_O2Chionoecetes tanneri254347.86
CT_2_high_O2Chionoecetes tanneri50434277.777.489943.410450.3610175.2381.409660.17133.666915.286886.662.023.210.079596.1773.242
CT_2_high_O2Chionoecetes tanneri75434277.727.429757.110331.6410059.6431.139513.80114.697816.917784.561.732.750.079596.1813.680
CT_2_high_O2Chionoecetes tanneri150434277.657.3610425.511129.8010836.8530.5510199.11107.119619.479579.671.622.570.079596.1854.653
CT_2_high_O2Chionoecetes tanneri255434277.537.248900.19675.809421.0599.968751.3669.7310878.0110832.991.051.670.079596.1935.354
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CT_3_high_O2Chionoecetes tanneri0434278.117.817445.37533.767335.4129.456999.22206.742347.062337.353.124.960.079596.1561.041
CT_3_high_O2Chionoecetes tanneri254347.83
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CT_3_high_O2Chionoecetes tanneri1440434277.837.5314893.915569.8715160.0507.7814428.21223.969206.719168.613.385.380.079596.1744.214
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CT_4_high_O2Chionoecetes tanneri25434277.787.4911128.211683.4111375.8416.8910805.91153.017558.727527.442.313.670.079596.1773.534
CT_4_high_O2Chionoecetes tanneri50434277.737.4410798.111406.3011106.0455.2110518.02132.768253.518219.362.013.190.079596.1803.907
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CT_2_low_O2Chionoecetes tanneri1440434277.417.124064.24513.984395.1362.224008.6924.246567.466540.280.370.580.079596.2013.308
CT_3_low_O2Chionoecetes tanneri0434277.947.645228.65384.575242.8136.865005.93100.032481.352471.081.512.400.079596.1671.129
CT_3_low_O2Chionoecetes tanneri25434277.737.446276.96624.066449.7264.406108.1777.094793.914774.071.161.850.079596.1802.275
CT_3_low_O2Chionoecetes tanneri50434277.637.346908.97392.417197.8368.326761.6567.816678.156650.511.021.630.079596.1863.205
CT_3_low_O2Chionoecetes tanneri75434277.607.316800.27308.367115.9388.996664.5762.387052.837023.640.941.500.079596.1883.398
CT_3_low_O2Chionoecetes tanneri150434277.557.266768.77331.887138.8435.316648.0755.467892.707860.040.841.330.079596.1923.865
CT_3_low_O2Chionoecetes tanneri255434
CT_3_low_O2Chionoecetes tanneri1440434
CT_4_low_O2Chionoecetes tanneri0434277.737.445081.45359.485218.4213.904942.0962.383878.323862.270.941.500.079596.1801.853
CT_4_low_O2Chionoecetes tanneri25434277.547.265782.96262.546097.7371.845678.4547.376741.886713.980.721.140.079596.1923.345
CT_4_low_O2Chionoecetes tanneri50434277.447.155499.96074.415914.5457.255422.1135.128290.528256.220.530.840.079596.1994.178
CT_4_low_O2Chionoecetes tanneri75434277.327.035570.46316.496150.2612.585510.5327.0811106.8311060.870.410.650.079596.2065.714
CT_4_low_O2Chionoecetes tanneri150434277.327.045601.46336.326169.5601.805539.8427.8610911.4610866.300.420.670.079596.2065.703
CT_4_low_O2Chionoecetes tanneri255434277.236.955825.56746.266568.6771.475773.5723.6013987.7213929.830.360.570.079596.2127.449
CT_4_low_O2Chionoecetes tanneri1440434277.547.256672.37239.197048.6439.246555.9053.457964.007931.050.811.280.079596.1923.888
CT_5_low_O2Chionoecetes tanneri0434277.727.433765.23972.533867.9162.133660.6645.152939.562927.390.681.080.079596.1811.387
CT_5_low_O2Chionoecetes tanneri25434277.527.234198.14566.554446.3289.404124.8032.125247.195225.480.490.770.079596.1942.605
CT_5_low_O2Chionoecetes tanneri50434277.437.143825.34230.854119.5325.403770.2023.865899.865875.440.360.570.079596.1992.971
CT_5_low_O2Chionoecetes tanneri75434277.347.053720.84196.734086.2390.353676.9718.927077.457048.160.290.450.079596.2053.636
CT_5_low_O2Chionoecetes tanneri150434277.357.063330.63747.143648.5341.343289.8317.326188.856163.240.260.420.079596.2053.157
CT_5_low_O2Chionoecetes tanneri255434277.276.993379.23868.433766.6407.573344.0314.997389.677359.090.230.360.079596.2103.914
CT_5_low_O2Chionoecetes tanneri1440434277.377.082815.33151.843068.9275.292778.2515.324991.424970.760.230.370.079596.2032.535
CT_6_low_O2Chionoecetes tanneri0434277.927.625671.05855.415701.2155.765441.64103.862824.072812.381.572.490.079596.1681.294
CT_6_low_O2Chionoecetes tanneri25434277.617.326107.76553.046380.5341.225982.0057.296186.716161.110.871.380.079596.1883.011
CT_6_low_O2Chionoecetes tanneri50434277.507.216082.06643.326468.4439.595984.3344.517970.237937.250.671.070.079596.1953.947
CT_6_low_O2Chionoecetes tanneri75434277.427.145785.76403.186234.6492.405706.0836.128927.788890.840.550.870.079596.2004.543
CT_6_low_O2Chionoecetes tanneri150434277.407.125193.65770.535618.6463.035124.5930.988395.248360.500.470.740.079596.2014.295
CT_6_low_O2Chionoecetes tanneri255434277.397.115308.45910.715755.1484.525239.6130.958785.018748.660.470.740.079596.2024.519
CT_6_low_O2Chionoecetes tanneri1440434277.337.053544.93997.993892.7371.843502.8618.036741.946714.040.270.430.079596.2063.499